RNA–Protein interactions for RNA: ENST00000554891.5

HNRNPC-213, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-213ENST00000554891 ARHGEF40Q8TER5 1519 aa17.22■□□□□ 0.35
HNRNPC-213ENST00000554891 BCORL1Q5H9F3 1711 aa17.22■□□□□ 0.35
HNRNPC-213ENST00000554891 ZMYM4Q5VZL5 1548 aa17.21■□□□□ 0.34
HNRNPC-213ENST00000554891 CCDC18Q5T9S5 1454 aa17.2■□□□□ 0.34
HNRNPC-213ENST00000554891 POGZQ7Z3K3 1410 aa17.2■□□□□ 0.34
HNRNPC-213ENST00000554891 HECW2Q9P2P5 1572 aa17.19■□□□□ 0.34
HNRNPC-213ENST00000554891 FYCO1Q9BQS8 1478 aa17.19■□□□□ 0.34
HNRNPC-213ENST00000554891 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
HNRNPC-213ENST00000554891 ZFYVE16Q7Z3T8 1539 aa17.18■□□□□ 0.34
HNRNPC-213ENST00000554891 PTPRMP28827 1452 aa17.18■□□□□ 0.34
HNRNPC-213ENST00000554891 MADDQ8WXG6 1647 aa17.18■□□□□ 0.34
HNRNPC-213ENST00000554891 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
HNRNPC-213ENST00000554891 LOC105371045A0A1W2PR82 267 aa17.16■□□□□ 0.34
HNRNPC-213ENST00000554891 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
HNRNPC-213ENST00000554891 PREX2Q70Z35 1606 aa17.14■□□□□ 0.33
HNRNPC-213ENST00000554891 MAGI2Q86UL8 1455 aa17.14■□□□□ 0.33
HNRNPC-213ENST00000554891 ARHGEF12Q9NZN5 1544 aa17.14■□□□□ 0.33
HNRNPC-213ENST00000554891 MLECQ14165 292 aa17.13■□□□□ 0.33
HNRNPC-213ENST00000554891 RIMS1Q86UR5 1692 aaKnown RBP17.13■□□□□ 0.33
HNRNPC-213ENST00000554891 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
HNRNPC-213ENST00000554891 TRAPPC8Q9Y2L5 1435 aa17.11■□□□□ 0.33
HNRNPC-213ENST00000554891 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
HNRNPC-213ENST00000554891 ATP10AO60312 1499 aa17.1■□□□□ 0.33
HNRNPC-213ENST00000554891 KDM5CP41229 1560 aa17.1■□□□□ 0.33
HNRNPC-213ENST00000554891 ZNF518AQ6AHZ1 1483 aa17.09■□□□□ 0.33
HNRNPC-213ENST00000554891 ITSN2Q9NZM3 1697 aa17.08■□□□□ 0.32
HNRNPC-213ENST00000554891 ABCC1P33527 1531 aa17.08■□□□□ 0.32
HNRNPC-213ENST00000554891 ZNF777Q9ULD5 760 aaPredicted RBP17.08■□□□□ 0.32
HNRNPC-213ENST00000554891 GPATCH8Q9UKJ3 1502 aaKnown RBP17.07■□□□□ 0.32
HNRNPC-213ENST00000554891 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
HNRNPC-213ENST00000554891 SAMD9LQ8IVG5 1584 aa17.06■□□□□ 0.32
HNRNPC-213ENST00000554891 C9orf84Q5VXU9 1444 aa17.05■□□□□ 0.32
HNRNPC-213ENST00000554891 DIP2CQ9Y2E4 1556 aa17.05■□□□□ 0.32
HNRNPC-213ENST00000554891 FER1L4A9Z1Z3 1794 aa17.05■□□□□ 0.32
HNRNPC-213ENST00000554891 ABCA6Q8N139 1617 aa17.04■□□□□ 0.32
HNRNPC-213ENST00000554891 HNRNPMP52272 730 aaKnown RBP eCLIP17.04■□□□□ 0.325e-7■■■■□ 19.9
HNRNPC-213ENST00000554891 MTUS2Q5JR59 1369 aa17.03■□□□□ 0.32
HNRNPC-213ENST00000554891 KIDINS220Q9ULH0 1771 aa17.03■□□□□ 0.32
HNRNPC-213ENST00000554891 MLH3Q9UHC1 1453 aa17.02■□□□□ 0.32
HNRNPC-213ENST00000554891 CCNB3Q8WWL7 1395 aa17.01■□□□□ 0.31
HNRNPC-213ENST00000554891 SYCP2Q9BX26 1530 aa17.01■□□□□ 0.31
HNRNPC-213ENST00000554891 CEBPAP49715 358 aaPredicted RBP17■□□□□ 0.31
HNRNPC-213ENST00000554891 CFDP1Q9UEE9 299 aaPredicted RBP17■□□□□ 0.31
HNRNPC-213ENST00000554891 ZNF644Q9H582 1327 aaPredicted RBP16.99■□□□□ 0.31
HNRNPC-213ENST00000554891 LMTK3Q96Q04 1460 aa16.99■□□□□ 0.31
HNRNPC-213ENST00000554891 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
HNRNPC-213ENST00000554891 HSPA2P54652 639 aa16.97■□□□□ 0.31
HNRNPC-213ENST00000554891 EHBP1L1Q8N3D4 1523 aa16.96■□□□□ 0.31
HNRNPC-213ENST00000554891 REREQ9P2R6 1566 aa16.96■□□□□ 0.31
HNRNPC-213ENST00000554891 SPAG9O60271 1321 aaKnown RBP16.94■□□□□ 0.3
HNRNPC-213ENST00000554891 ILDR1Q86SU0 546 aaPredicted RBP16.93■□□□□ 0.3
HNRNPC-213ENST00000554891 KIAA1107Q9UPP5 1409 aa16.93■□□□□ 0.3
HNRNPC-213ENST00000554891 AGLP35573 1532 aa16.92■□□□□ 0.3
HNRNPC-213ENST00000554891 VPS8Q8N3P4 1428 aa16.92■□□□□ 0.3
HNRNPC-213ENST00000554891 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
HNRNPC-213ENST00000554891 NCOA2Q15596 1464 aa16.91■□□□□ 0.3
HNRNPC-213ENST00000554891 PLEKHH2Q8IVE3 1493 aa16.9■□□□□ 0.3
HNRNPC-213ENST00000554891 MBD5Q9P267 1494 aa16.9■□□□□ 0.3
HNRNPC-213ENST00000554891 ATP7AQ04656 1500 aa16.9■□□□□ 0.3
HNRNPC-213ENST00000554891 INO80Q9ULG1 1556 aaPredicted RBP16.89■□□□□ 0.3
HNRNPC-213ENST00000554891 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
HNRNPC-213ENST00000554891 C3P01024 1663 aa16.88■□□□□ 0.29
HNRNPC-213ENST00000554891 SETD1BQ9UPS6 1966 aaKnown RBP16.86■□□□□ 0.29
HNRNPC-213ENST00000554891 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
HNRNPC-213ENST00000554891 PREX1Q8TCU6 1659 aa16.85■□□□□ 0.29
HNRNPC-213ENST00000554891 A2MP01023 1474 aa16.84■□□□□ 0.29
HNRNPC-213ENST00000554891 PLXNC1O60486 1568 aa16.83■□□□□ 0.28
HNRNPC-213ENST00000554891 CAMSAP2Q08AD1 1489 aa16.83■□□□□ 0.28
HNRNPC-213ENST00000554891 ESF1Q9H501 851 aaKnown RBP16.82■□□□□ 0.28
HNRNPC-213ENST00000554891 GGT6Q6P531 493 aa16.81■□□□□ 0.28
HNRNPC-213ENST00000554891 ADGBQ8N7X0 1667 aa16.81■□□□□ 0.28
HNRNPC-213ENST00000554891 CLTCQ00610 1675 aaKnown RBP16.79■□□□□ 0.28
HNRNPC-213ENST00000554891 STRCQ7RTU9 1775 aa16.79■□□□□ 0.28
HNRNPC-213ENST00000554891 RTEL1-TNFRSF6BF6WH68 1400 aa16.79■□□□□ 0.28
HNRNPC-213ENST00000554891 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
HNRNPC-213ENST00000554891 MAP3K1Q13233 1512 aa16.78■□□□□ 0.28
HNRNPC-213ENST00000554891 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
HNRNPC-213ENST00000554891 UHRF1BP1Q6BDS2 1440 aa16.77■□□□□ 0.27
HNRNPC-213ENST00000554891 CNTLNQ9NXG0 1405 aa16.77■□□□□ 0.27
HNRNPC-213ENST00000554891 MROH2AA6NES4 1674 aa16.76■□□□□ 0.27
HNRNPC-213ENST00000554891 DHX29Q7Z478 1369 aaKnown RBP16.76■□□□□ 0.27
HNRNPC-213ENST00000554891 ARHGEF5Q12774 1597 aa16.74■□□□□ 0.27
HNRNPC-213ENST00000554891 KIF3BO15066 747 aa16.73■□□□□ 0.27
HNRNPC-213ENST00000554891 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
HNRNPC-213ENST00000554891 MYOM3Q5VTT5 1437 aa16.72■□□□□ 0.27
HNRNPC-213ENST00000554891 TSPY4P0CV99 314 aa16.7■□□□□ 0.26
HNRNPC-213ENST00000554891 TSPY10P0CW01 314 aa16.7■□□□□ 0.26
HNRNPC-213ENST00000554891 PTPRKQ15262 1439 aa16.7■□□□□ 0.26
HNRNPC-213ENST00000554891 FBXO41Q8TF61 875 aa16.69■□□□□ 0.26
HNRNPC-213ENST00000554891 NPATQ14207 1427 aa16.69■□□□□ 0.26
HNRNPC-213ENST00000554891 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
HNRNPC-213ENST00000554891 MIA2Q96PC5 1412 aa16.68■□□□□ 0.26
HNRNPC-213ENST00000554891 APLP2Q06481 763 aa16.67■□□□□ 0.26
HNRNPC-213ENST00000554891 FBXO31Q5XUX0 539 aaPredicted RBP16.66■□□□□ 0.26
HNRNPC-213ENST00000554891 MAST1Q9Y2H9 1570 aa16.66■□□□□ 0.26
HNRNPC-213ENST00000554891 CERKQ8TCT0 537 aa16.65■□□□□ 0.26
HNRNPC-213ENST00000554891 CAMSAP1Q5T5Y3 1602 aa16.64■□□□□ 0.25
HNRNPC-213ENST00000554891 MYO3AQ8NEV4 1616 aa16.64■□□□□ 0.25
HNRNPC-213ENST00000554891 PTPN23Q9H3S7 1636 aa16.63■□□□□ 0.25
HNRNPC-213ENST00000554891 NCOA1Q15788 1441 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms