RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 POGZQ7Z3K3 1410 aa30.05■■■□□ 2.4
PRKCH-210ENST00000554835 MAGI2Q86UL8 1455 aa30.05■■■□□ 2.4
PRKCH-210ENST00000554835 LRRIQ1Q96JM4 1722 aa30.04■■■□□ 2.4
PRKCH-210ENST00000554835 LMTK3Q96Q04 1460 aa30.03■■■□□ 2.4
PRKCH-210ENST00000554835 PCF11O94913 1555 aaKnown RBP30.03■■■□□ 2.4
PRKCH-210ENST00000554835 MYO5CQ9NQX4 1742 aa30.02■■■□□ 2.4
PRKCH-210ENST00000554835 TROQ12816 1431 aaPredicted RBP29.99■■■□□ 2.39
PRKCH-210ENST00000554835 CDK11AQ9UQ88 783 aaPredicted RBP29.99■■■□□ 2.39
PRKCH-210ENST00000554835 EFCAB2Q5VUJ9 269 aa29.98■■■□□ 2.39
PRKCH-210ENST00000554835 MLECQ14165 292 aa29.92■■■□□ 2.38
PRKCH-210ENST00000554835 ATP10AO60312 1499 aa29.92■■■□□ 2.38
PRKCH-210ENST00000554835 PLPPR3Q6T4P5 718 aa29.9■■■□□ 2.38
PRKCH-210ENST00000554835 ARHGAP5Q13017 1502 aa29.89■■■□□ 2.38
PRKCH-210ENST00000554835 FER1L4A9Z1Z3 1794 aa29.88■■■□□ 2.37
PRKCH-210ENST00000554835 CLIP1P30622 1438 aa29.88■■■□□ 2.37
PRKCH-210ENST00000554835 C9orf84Q5VXU9 1444 aa29.88■■■□□ 2.37
PRKCH-210ENST00000554835 CDC42BPBQ9Y5S2 1711 aa29.86■■■□□ 2.37
PRKCH-210ENST00000554835 HSPA2P54652 639 aa29.86■■■□□ 2.37
PRKCH-210ENST00000554835 AFAP1Q8N556 730 aa29.86■■■□□ 2.37
PRKCH-210ENST00000554835 ZNF518AQ6AHZ1 1483 aa29.86■■■□□ 2.37
PRKCH-210ENST00000554835 KDM5CP41229 1560 aa29.86■■■□□ 2.37
PRKCH-210ENST00000554835 CASKIN1Q8WXD9 1431 aa29.85■■■□□ 2.37
PRKCH-210ENST00000554835 ARHGEF12Q9NZN5 1544 aa29.85■■■□□ 2.37
PRKCH-210ENST00000554835 FBXO41Q8TF61 875 aa29.81■■■□□ 2.36
PRKCH-210ENST00000554835 CCDC18Q5T9S5 1454 aa29.79■■■□□ 2.36
PRKCH-210ENST00000554835 PREX2Q70Z35 1606 aa29.78■■■□□ 2.36
PRKCH-210ENST00000554835 DIP2CQ9Y2E4 1556 aa29.77■■■□□ 2.36
PRKCH-210ENST00000554835 TRAPPC8Q9Y2L5 1435 aa29.74■■■□□ 2.35
PRKCH-210ENST00000554835 ABCC1P33527 1531 aa29.73■■■□□ 2.35
PRKCH-210ENST00000554835 CEBPAP49715 358 aaPredicted RBP29.73■■■□□ 2.35
PRKCH-210ENST00000554835 ABCA6Q8N139 1617 aa29.72■■■□□ 2.35
PRKCH-210ENST00000554835 MLH3Q9UHC1 1453 aa29.72■■■□□ 2.35
PRKCH-210ENST00000554835 CDC42BPAQ5VT25 1732 aa29.71■■■□□ 2.35
PRKCH-210ENST00000554835 REREQ9P2R6 1566 aa29.7■■■□□ 2.35
PRKCH-210ENST00000554835 FYCO1Q9BQS8 1478 aa29.7■■■□□ 2.35
PRKCH-210ENST00000554835 ITSN2Q9NZM3 1697 aa29.69■■■□□ 2.34
PRKCH-210ENST00000554835 MYT1LQ9UL68 1186 aa29.68■■■□□ 2.34
PRKCH-210ENST00000554835 PREX1Q8TCU6 1659 aa29.65■■■□□ 2.34
PRKCH-210ENST00000554835 KIDINS220Q9ULH0 1771 aa29.63■■■□□ 2.33
PRKCH-210ENST00000554835 AGLP35573 1532 aa29.61■■■□□ 2.33
PRKCH-210ENST00000554835 GPATCH8Q9UKJ3 1502 aaKnown RBP29.59■■■□□ 2.33
PRKCH-210ENST00000554835 SAMD9LQ8IVG5 1584 aa29.59■■■□□ 2.33
PRKCH-210ENST00000554835 SETD1BQ9UPS6 1966 aaKnown RBP29.55■■■□□ 2.32
PRKCH-210ENST00000554835 ZNF777Q9ULD5 760 aaPredicted RBP29.55■■■□□ 2.32
PRKCH-210ENST00000554835 C3P01024 1663 aa29.55■■■□□ 2.32
PRKCH-210ENST00000554835 SYCP2Q9BX26 1530 aa29.53■■■□□ 2.32
PRKCH-210ENST00000554835 STRCQ7RTU9 1775 aa29.52■■■□□ 2.32
PRKCH-210ENST00000554835 UHRF1BP1Q6BDS2 1440 aa29.51■■■□□ 2.31
PRKCH-210ENST00000554835 HNRNPMP52272 730 aaKnown RBP eCLIP29.5■■■□□ 2.31
PRKCH-210ENST00000554835 CERKQ8TCT0 537 aa29.49■■■□□ 2.31
PRKCH-210ENST00000554835 KIAA1107Q9UPP5 1409 aa29.45■■■□□ 2.3
PRKCH-210ENST00000554835 SPAG9O60271 1321 aaKnown RBP29.45■■■□□ 2.3
PRKCH-210ENST00000554835 CFDP1Q9UEE9 299 aaPredicted RBP29.43■■■□□ 2.3
PRKCH-210ENST00000554835 CCNB3Q8WWL7 1395 aa29.42■■■□□ 2.3
PRKCH-210ENST00000554835 ESF1Q9H501 851 aaKnown RBP29.42■■■□□ 2.3
PRKCH-210ENST00000554835 ATP7AQ04656 1500 aa29.4■■■□□ 2.3
PRKCH-210ENST00000554835 MTUS2Q5JR59 1369 aa29.4■■■□□ 2.3
PRKCH-210ENST00000554835 CNTLNQ9NXG0 1405 aa29.4■■■□□ 2.3
PRKCH-210ENST00000554835 SUPT6HQ7KZ85 1726 aaKnown RBP29.4■■■□□ 2.3
PRKCH-210ENST00000554835 INO80Q9ULG1 1556 aaPredicted RBP29.39■■■□□ 2.3
PRKCH-210ENST00000554835 PLEKHH2Q8IVE3 1493 aa29.38■■■□□ 2.29
PRKCH-210ENST00000554835 PLXNC1O60486 1568 aa29.37■■■□□ 2.29
PRKCH-210ENST00000554835 DMRT2Q9Y5R5 561 aa29.36■■■□□ 2.29
PRKCH-210ENST00000554835 TIAM1Q13009 1591 aa29.35■■■□□ 2.29
PRKCH-210ENST00000554835 ZNF644Q9H582 1327 aaPredicted RBP29.35■■■□□ 2.29
PRKCH-210ENST00000554835 MROH2AA6NES4 1674 aa29.34■■■□□ 2.29
PRKCH-210ENST00000554835 A2MP01023 1474 aa29.32■■■□□ 2.28
PRKCH-210ENST00000554835 ZMYM3Q14202 1370 aa29.32■■■□□ 2.28
PRKCH-210ENST00000554835 EHBP1L1Q8N3D4 1523 aa29.31■■■□□ 2.28
PRKCH-210ENST00000554835 CEP162Q5TB80 1403 aa29.31■■■□□ 2.28
PRKCH-210ENST00000554835 MBD5Q9P267 1494 aa29.3■■■□□ 2.28
PRKCH-210ENST00000554835 PTPRTO14522 1441 aa29.3■■■□□ 2.28
PRKCH-210ENST00000554835 NPATQ14207 1427 aa29.29■■■□□ 2.28
PRKCH-210ENST00000554835 NCOA1Q15788 1441 aa29.28■■■□□ 2.28
PRKCH-210ENST00000554835 CLTCQ00610 1675 aaKnown RBP29.28■■■□□ 2.28
PRKCH-210ENST00000554835 ADGBQ8N7X0 1667 aa29.23■■■□□ 2.27
PRKCH-210ENST00000554835 GGT6Q6P531 493 aa29.22■■■□□ 2.27
PRKCH-210ENST00000554835 CAMSAP1Q5T5Y3 1602 aa29.21■■■□□ 2.27
PRKCH-210ENST00000554835 LTBP4Q8N2S1 1624 aa29.2■■■□□ 2.27
PRKCH-210ENST00000554835 PTPRKQ15262 1439 aa29.2■■■□□ 2.26
PRKCH-210ENST00000554835 RTEL1-TNFRSF6BF6WH68 1400 aa29.18■■■□□ 2.26
PRKCH-210ENST00000554835 NCOA2Q15596 1464 aa29.17■■■□□ 2.26
PRKCH-210ENST00000554835 MYO3AQ8NEV4 1616 aa29.16■■■□□ 2.26
PRKCH-210ENST00000554835 PPP6R1Q9UPN7 881 aa29.14■■■□□ 2.26
PRKCH-210ENST00000554835 ZNF142P52746 1687 aaPredicted RBP29.14■■■□□ 2.26
PRKCH-210ENST00000554835 DHX29Q7Z478 1369 aaKnown RBP29.13■■■□□ 2.25
PRKCH-210ENST00000554835 NCKAP5LQ9HCH0 1330 aa29.13■■■□□ 2.25
PRKCH-210ENST00000554835 CAMSAP2Q08AD1 1489 aa29.11■■■□□ 2.25
PRKCH-210ENST00000554835 CEP170BQ9Y4F5 1589 aaPredicted RBP29.11■■■□□ 2.25
PRKCH-210ENST00000554835 CCDC141Q6ZP82 1450 aa29.1■■■□□ 2.25
PRKCH-210ENST00000554835 PLA2R1Q13018 1463 aa29.07■■■□□ 2.24
PRKCH-210ENST00000554835 TCOF1Q13428 1488 aaKnown RBP29.05■■■□□ 2.24
PRKCH-210ENST00000554835 LOC105371045A0A1W2PR82 267 aa29.04■■■□□ 2.24
PRKCH-210ENST00000554835 KIF3BO15066 747 aa29.04■■■□□ 2.24
PRKCH-210ENST00000554835 ZNF335Q9H4Z2 1342 aaPredicted RBP29.01■■■□□ 2.23
PRKCH-210ENST00000554835 PKD2Q13563 968 aa29.01■■■□□ 2.23
PRKCH-210ENST00000554835 RSPH4AQ5TD94 716 aa29.01■■■□□ 2.23
PRKCH-210ENST00000554835 IQSEC2Q5JU85 1478 aa29.01■■■□□ 2.23
PRKCH-210ENST00000554835 ARHGEF5Q12774 1597 aa29.01■■■□□ 2.23
PRKCH-210ENST00000554835 LRRC9Q6ZRR7 1453 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms