RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 CFAP74Q9C0B2 1584 aa17.08■□□□□ 0.32
CNIH1-204ENST00000554683 PREX2Q70Z35 1606 aa17.07■□□□□ 0.32
CNIH1-204ENST00000554683 CDK11AQ9UQ88 783 aaPredicted RBP17.06■□□□□ 0.32
CNIH1-204ENST00000554683 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
CNIH1-204ENST00000554683 ARAP3Q8WWN8 1544 aa17.06■□□□□ 0.32
CNIH1-204ENST00000554683 CDC42BPAQ5VT25 1732 aa17.05■□□□□ 0.32
CNIH1-204ENST00000554683 CDC42BPBQ9Y5S2 1711 aa17.03■□□□□ 0.32
CNIH1-204ENST00000554683 NEO1Q92859 1461 aa17.02■□□□□ 0.32
CNIH1-204ENST00000554683 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
CNIH1-204ENST00000554683 MTUS2Q5JR59 1369 aa17■□□□□ 0.31
CNIH1-204ENST00000554683 FANCAO15360 1455 aa16.99■□□□□ 0.31
CNIH1-204ENST00000554683 COL17A1Q9UMD9 1497 aaPredicted RBP16.99■□□□□ 0.31
CNIH1-204ENST00000554683 PLCH2O75038 1416 aa16.99■□□□□ 0.31
CNIH1-204ENST00000554683 LRRC9Q6ZRR7 1453 aa16.99■□□□□ 0.31
CNIH1-204ENST00000554683 FRMPD1Q5SYB0 1578 aa16.98■□□□□ 0.31
CNIH1-204ENST00000554683 ITSN2Q9NZM3 1697 aa16.98■□□□□ 0.31
CNIH1-204ENST00000554683 RICTORQ6R327 1708 aa16.97■□□□□ 0.31
CNIH1-204ENST00000554683 ARHGAP5Q13017 1502 aa16.96■□□□□ 0.31
CNIH1-204ENST00000554683 PHLDB1Q86UU1 1377 aa16.94■□□□□ 0.3
CNIH1-204ENST00000554683 NCOA2Q15596 1464 aa16.93■□□□□ 0.3
CNIH1-204ENST00000554683 ABCC1P33527 1531 aa16.93■□□□□ 0.3
CNIH1-204ENST00000554683 GPATCH8Q9UKJ3 1502 aaKnown RBP16.93■□□□□ 0.3
CNIH1-204ENST00000554683 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
CNIH1-204ENST00000554683 AKNAQ7Z591 1439 aa16.92■□□□□ 0.3
CNIH1-204ENST00000554683 SAMD9LQ8IVG5 1584 aa16.92■□□□□ 0.3
CNIH1-204ENST00000554683 ADGRL1O94910 1474 aa16.91■□□□□ 0.3
CNIH1-204ENST00000554683 ZMYM4Q5VZL5 1548 aa16.89■□□□□ 0.29
CNIH1-204ENST00000554683 POGZQ7Z3K3 1410 aa16.87■□□□□ 0.29
CNIH1-204ENST00000554683 KANK4Q5T7N3 995 aaPredicted RBP16.87■□□□□ 0.29
CNIH1-204ENST00000554683 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
CNIH1-204ENST00000554683 CCNB3Q8WWL7 1395 aa16.87■□□□□ 0.29
CNIH1-204ENST00000554683 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
CNIH1-204ENST00000554683 KDM5CP41229 1560 aa16.86■□□□□ 0.29
CNIH1-204ENST00000554683 POTEDQ86YR6 584 aa16.86■□□□□ 0.29
CNIH1-204ENST00000554683 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
CNIH1-204ENST00000554683 SYCP2Q9BX26 1530 aa16.85■□□□□ 0.29
CNIH1-204ENST00000554683 EFCAB2Q5VUJ9 269 aa16.83■□□□□ 0.28
CNIH1-204ENST00000554683 SCAPERQ9BY12 1400 aa16.83■□□□□ 0.28
CNIH1-204ENST00000554683 ARHGEF12Q9NZN5 1544 aa16.83■□□□□ 0.28
CNIH1-204ENST00000554683 ZNF518AQ6AHZ1 1483 aa16.82■□□□□ 0.28
CNIH1-204ENST00000554683 HECW2Q9P2P5 1572 aa16.81■□□□□ 0.28
CNIH1-204ENST00000554683 APLP2Q06481 763 aa16.81■□□□□ 0.28
CNIH1-204ENST00000554683 PLEKHH2Q8IVE3 1493 aa16.8■□□□□ 0.28
CNIH1-204ENST00000554683 CAMSAP2Q08AD1 1489 aa16.8■□□□□ 0.28
CNIH1-204ENST00000554683 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
CNIH1-204ENST00000554683 RAPGEF3O95398 923 aa16.79■□□□□ 0.28
CNIH1-204ENST00000554683 ZFYVE16Q7Z3T8 1539 aa16.78■□□□□ 0.28
CNIH1-204ENST00000554683 KIAA1107Q9UPP5 1409 aa16.78■□□□□ 0.28
CNIH1-204ENST00000554683 HOXD11P31277 338 aaPredicted RBP16.77■□□□□ 0.28
CNIH1-204ENST00000554683 TRAPPC8Q9Y2L5 1435 aa16.77■□□□□ 0.27
CNIH1-204ENST00000554683 INO80Q9ULG1 1556 aaPredicted RBP16.77■□□□□ 0.27
CNIH1-204ENST00000554683 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
CNIH1-204ENST00000554683 CFDP1Q9UEE9 299 aaPredicted RBP16.76■□□□□ 0.27
CNIH1-204ENST00000554683 ABCA6Q8N139 1617 aa16.76■□□□□ 0.27
CNIH1-204ENST00000554683 PTPN23Q9H3S7 1636 aa16.75■□□□□ 0.27
CNIH1-204ENST00000554683 KIDINS220Q9ULH0 1771 aa16.75■□□□□ 0.27
CNIH1-204ENST00000554683 MIA2Q96PC5 1412 aa16.75■□□□□ 0.27
CNIH1-204ENST00000554683 ARHGEF5Q12774 1597 aa16.75■□□□□ 0.27
CNIH1-204ENST00000554683 SIGLEC1Q9BZZ2 1709 aa16.75■□□□□ 0.27
CNIH1-204ENST00000554683 MBD5Q9P267 1494 aa16.74■□□□□ 0.27
CNIH1-204ENST00000554683 DIP2CQ9Y2E4 1556 aa16.73■□□□□ 0.27
CNIH1-204ENST00000554683 YEATS2Q9ULM3 1422 aa16.73■□□□□ 0.27
CNIH1-204ENST00000554683 MLH3Q9UHC1 1453 aa16.73■□□□□ 0.27
CNIH1-204ENST00000554683 CROCC2H7BZ55 1655 aa16.72■□□□□ 0.27
CNIH1-204ENST00000554683 FGD6Q6ZV73 1430 aa16.72■□□□□ 0.27
CNIH1-204ENST00000554683 ZNF777Q9ULD5 760 aaPredicted RBP16.71■□□□□ 0.27
CNIH1-204ENST00000554683 TCOF1Q13428 1488 aaKnown RBP16.71■□□□□ 0.27
CNIH1-204ENST00000554683 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
CNIH1-204ENST00000554683 ZNF644Q9H582 1327 aaPredicted RBP16.7■□□□□ 0.26
CNIH1-204ENST00000554683 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
CNIH1-204ENST00000554683 REREQ9P2R6 1566 aa16.7■□□□□ 0.26
CNIH1-204ENST00000554683 ADGBQ8N7X0 1667 aa16.68■□□□□ 0.26
CNIH1-204ENST00000554683 DNMT1P26358 1616 aaKnown RBP16.67■□□□□ 0.26
CNIH1-204ENST00000554683 AFAP1Q8N556 730 aa16.67■□□□□ 0.26
CNIH1-204ENST00000554683 MAST1Q9Y2H9 1570 aa16.67■□□□□ 0.26
CNIH1-204ENST00000554683 C9orf84Q5VXU9 1444 aa16.66■□□□□ 0.26
CNIH1-204ENST00000554683 BCORL1Q5H9F3 1711 aa16.65■□□□□ 0.26
CNIH1-204ENST00000554683 PLXNC1O60486 1568 aa16.65■□□□□ 0.26
CNIH1-204ENST00000554683 HNRNPMP52272 730 aaKnown RBP eCLIP16.65■□□□□ 0.262e-8■■■■■ 32.7
CNIH1-204ENST00000554683 ATP10AO60312 1499 aa16.64■□□□□ 0.25
CNIH1-204ENST00000554683 SHANK2Q9UPX8 1470 aa16.63■□□□□ 0.25
CNIH1-204ENST00000554683 ADAMTSL3P82987 1691 aa16.62■□□□□ 0.25
CNIH1-204ENST00000554683 RTEL1-TNFRSF6BF6WH68 1400 aa16.62■□□□□ 0.25
CNIH1-204ENST00000554683 SPAG9O60271 1321 aaKnown RBP16.61■□□□□ 0.25
CNIH1-204ENST00000554683 AGLP35573 1532 aa16.6■□□□□ 0.25
CNIH1-204ENST00000554683 ABCC5O15440 1437 aa16.59■□□□□ 0.25
CNIH1-204ENST00000554683 DAPK1P53355 1430 aa16.59■□□□□ 0.25
CNIH1-204ENST00000554683 MADDQ8WXG6 1647 aa16.58■□□□□ 0.24
CNIH1-204ENST00000554683 FER1L4A9Z1Z3 1794 aa16.57■□□□□ 0.24
CNIH1-204ENST00000554683 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
CNIH1-204ENST00000554683 PPARGC1BQ86YN6 1023 aaKnown RBP16.57■□□□□ 0.24
CNIH1-204ENST00000554683 A2MP01023 1474 aa16.56■□□□□ 0.24
CNIH1-204ENST00000554683 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
CNIH1-204ENST00000554683 RRBP1Q9P2E9 1410 aaKnown RBP16.55■□□□□ 0.24
CNIH1-204ENST00000554683 KDM4FA0A1W2PPD8 638 aa16.53■□□□□ 0.24
CNIH1-204ENST00000554683 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
CNIH1-204ENST00000554683 RIMS1Q86UR5 1692 aaKnown RBP16.53■□□□□ 0.24
CNIH1-204ENST00000554683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.52■□□□□ 0.24
CNIH1-204ENST00000554683 EIF2AK4Q9P2K8 1649 aaKnown RBP16.52■□□□□ 0.24
CNIH1-204ENST00000554683 ADGRL2O95490 1459 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms