RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 MAP3K4Q9Y6R4 1608 aa16.73■□□□□ 0.27
PSMC1-204ENST00000554624 PPRC1Q5VV67 1664 aaKnown RBP16.72■□□□□ 0.27
PSMC1-204ENST00000554624 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
PSMC1-204ENST00000554624 ABCA8O94911 1581 aa16.71■□□□□ 0.27
PSMC1-204ENST00000554624 MAGI3Q5TCQ9 1506 aa16.7■□□□□ 0.26
PSMC1-204ENST00000554624 CTTNBP2Q8WZ74 1663 aa16.68■□□□□ 0.26
PSMC1-204ENST00000554624 ADGRL1O94910 1474 aa16.67■□□□□ 0.26
PSMC1-204ENST00000554624 PHLDB1Q86UU1 1377 aa16.66■□□□□ 0.26
PSMC1-204ENST00000554624 ARID3CA6NKF2 412 aa16.66■□□□□ 0.26
PSMC1-204ENST00000554624 ATP10BO94823 1461 aa16.66■□□□□ 0.26
PSMC1-204ENST00000554624 EEA1Q15075 1411 aa16.65■□□□□ 0.26
PSMC1-204ENST00000554624 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
PSMC1-204ENST00000554624 SPDYE1Q8NFV5 336 aaPredicted RBP16.61■□□□□ 0.25
PSMC1-204ENST00000554624 CFAP43Q8NDM7 1665 aa16.6■□□□□ 0.25
PSMC1-204ENST00000554624 PLEKHD1A6NEE1 506 aa16.6■□□□□ 0.25
PSMC1-204ENST00000554624 ARAP3Q8WWN8 1544 aa16.59■□□□□ 0.25
PSMC1-204ENST00000554624 RANGAP1P46060 587 aaPredicted RBP16.58■□□□□ 0.24
PSMC1-204ENST00000554624 RAPGEF3O95398 923 aa16.54■□□□□ 0.24
PSMC1-204ENST00000554624 VASPP50552 380 aaPredicted RBP16.54■□□□□ 0.24
PSMC1-204ENST00000554624 SAMD9Q5K651 1589 aa16.52■□□□□ 0.24
PSMC1-204ENST00000554624 NEO1Q92859 1461 aa16.51■□□□□ 0.23
PSMC1-204ENST00000554624 ABCA9Q8IUA7 1624 aa16.48■□□□□ 0.23
PSMC1-204ENST00000554624 RAPGEF6Q8TEU7 1601 aa16.48■□□□□ 0.23
PSMC1-204ENST00000554624 NUP153P49790 1475 aaKnown RBP16.48■□□□□ 0.23
PSMC1-204ENST00000554624 FHOD3Q2V2M9 1422 aa16.48■□□□□ 0.23
PSMC1-204ENST00000554624 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
PSMC1-204ENST00000554624 ILDR1Q86SU0 546 aaPredicted RBP16.48■□□□□ 0.23
PSMC1-204ENST00000554624 ARID4BQ4LE39 1312 aaPredicted RBP16.45■□□□□ 0.22
PSMC1-204ENST00000554624 CLEC11AQ9Y240 323 aa16.44■□□□□ 0.22
PSMC1-204ENST00000554624 CDK11AQ9UQ88 783 aaPredicted RBP16.43■□□□□ 0.22
PSMC1-204ENST00000554624 EFCAB5A4FU69 1503 aa16.41■□□□□ 0.22
PSMC1-204ENST00000554624 PITPNM1O00562 1244 aa16.41■□□□□ 0.22
PSMC1-204ENST00000554624 AKNAQ7Z591 1439 aa16.41■□□□□ 0.22
PSMC1-204ENST00000554624 HECW2Q9P2P5 1572 aa16.4■□□□□ 0.22
PSMC1-204ENST00000554624 ATP1B4Q9UN42 357 aaPredicted RBP16.4■□□□□ 0.22
PSMC1-204ENST00000554624 DENND4BO75064 1496 aaPredicted RBP16.4■□□□□ 0.22
PSMC1-204ENST00000554624 KIF21BO75037 1637 aa16.37■□□□□ 0.21
PSMC1-204ENST00000554624 FANCAO15360 1455 aa16.37■□□□□ 0.21
PSMC1-204ENST00000554624 PRR29P0C7W0 189 aa16.37■□□□□ 0.21
PSMC1-204ENST00000554624 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
PSMC1-204ENST00000554624 PTPRMP28827 1452 aa16.36■□□□□ 0.21
PSMC1-204ENST00000554624 EFCAB2Q5VUJ9 269 aa16.36■□□□□ 0.21
PSMC1-204ENST00000554624 PLEKHG5O94827 1062 aa16.34■□□□□ 0.21
PSMC1-204ENST00000554624 MIER1Q8N108 512 aa16.34■□□□□ 0.21
PSMC1-204ENST00000554624 PLCD3Q8N3E9 789 aa16.34■□□□□ 0.21
PSMC1-204ENST00000554624 PLCH2O75038 1416 aa16.34■□□□□ 0.21
PSMC1-204ENST00000554624 POGZQ7Z3K3 1410 aa16.33■□□□□ 0.2
PSMC1-204ENST00000554624 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.33■□□□□ 0.2
PSMC1-204ENST00000554624 MAGI2Q86UL8 1455 aa16.32■□□□□ 0.2
PSMC1-204ENST00000554624 IFNLR1Q8IU57 520 aaPredicted RBP16.31■□□□□ 0.2
PSMC1-204ENST00000554624 ADAMTSL3P82987 1691 aa16.3■□□□□ 0.2
PSMC1-204ENST00000554624 SCAPERQ9BY12 1400 aa16.29■□□□□ 0.2
PSMC1-204ENST00000554624 FRMPD1Q5SYB0 1578 aa16.28■□□□□ 0.2
PSMC1-204ENST00000554624 CFAP74Q9C0B2 1584 aa16.28■□□□□ 0.2
PSMC1-204ENST00000554624 ARHGAP35Q9NRY4 1499 aa16.27■□□□□ 0.19
PSMC1-204ENST00000554624 CDK13Q14004 1512 aaKnown RBP16.26■□□□□ 0.19
PSMC1-204ENST00000554624 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
PSMC1-204ENST00000554624 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
PSMC1-204ENST00000554624 FBXO41Q8TF61 875 aa16.25■□□□□ 0.19
PSMC1-204ENST00000554624 BCORL1Q5H9F3 1711 aa16.25■□□□□ 0.19
PSMC1-204ENST00000554624 MLECQ14165 292 aa16.24■□□□□ 0.19
PSMC1-204ENST00000554624 YEATS2Q9ULM3 1422 aa16.23■□□□□ 0.19
PSMC1-204ENST00000554624 ZMYM4Q5VZL5 1548 aa16.23■□□□□ 0.19
PSMC1-204ENST00000554624 ARHGEF40Q8TER5 1519 aa16.23■□□□□ 0.19
PSMC1-204ENST00000554624 TTC37Q6PGP7 1564 aa16.22■□□□□ 0.19
PSMC1-204ENST00000554624 CLIP1P30622 1438 aa16.22■□□□□ 0.19
PSMC1-204ENST00000554624 TROQ12816 1431 aaPredicted RBP16.22■□□□□ 0.19
PSMC1-204ENST00000554624 ZFYVE16Q7Z3T8 1539 aa16.22■□□□□ 0.19
PSMC1-204ENST00000554624 RICTORQ6R327 1708 aa16.22■□□□□ 0.19
PSMC1-204ENST00000554624 ATP10AO60312 1499 aa16.22■□□□□ 0.19
PSMC1-204ENST00000554624 AFAP1Q8N556 730 aa16.21■□□□□ 0.19
PSMC1-204ENST00000554624 HECW1Q76N89 1606 aa16.2■□□□□ 0.18
PSMC1-204ENST00000554624 KLHL34Q8N239 644 aa16.2■□□□□ 0.18
PSMC1-204ENST00000554624 MYT1LQ9UL68 1186 aa16.2■□□□□ 0.18
PSMC1-204ENST00000554624 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
PSMC1-204ENST00000554624 CHRDL2Q6WN34 429 aa16.18■□□□□ 0.18
PSMC1-204ENST00000554624 CREBZFQ9NS37 354 aa16.18■□□□□ 0.18
PSMC1-204ENST00000554624 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
PSMC1-204ENST00000554624 LMTK3Q96Q04 1460 aa16.17■□□□□ 0.18
PSMC1-204ENST00000554624 ZNF518AQ6AHZ1 1483 aa16.16■□□□□ 0.18
PSMC1-204ENST00000554624 HSPA2P54652 639 aa16.16■□□□□ 0.18
PSMC1-204ENST00000554624 C9orf84Q5VXU9 1444 aa16.16■□□□□ 0.18
PSMC1-204ENST00000554624 CASKIN1Q8WXD9 1431 aa16.15■□□□□ 0.18
PSMC1-204ENST00000554624 ARHGAP5Q13017 1502 aa16.14■□□□□ 0.17
PSMC1-204ENST00000554624 SPOCK2Q92563 424 aa16.13■□□□□ 0.17
PSMC1-204ENST00000554624 KIF14Q15058 1648 aa16.12■□□□□ 0.17
PSMC1-204ENST00000554624 CCDC18Q5T9S5 1454 aa16.12■□□□□ 0.17
PSMC1-204ENST00000554624 FXR2P51116 673 aaKnown RBP eCLIP16.12■□□□□ 0.17
PSMC1-204ENST00000554624 ESF1Q9H501 851 aaKnown RBP16.12■□□□□ 0.17
PSMC1-204ENST00000554624 CEBPAP49715 358 aaPredicted RBP16.11■□□□□ 0.17
PSMC1-204ENST00000554624 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
PSMC1-204ENST00000554624 MLH3Q9UHC1 1453 aa16.1■□□□□ 0.17
PSMC1-204ENST00000554624 MYO5CQ9NQX4 1742 aa16.09■□□□□ 0.17
PSMC1-204ENST00000554624 ARHGEF12Q9NZN5 1544 aa16.09■□□□□ 0.17
PSMC1-204ENST00000554624 RTN4Q9NQC3 1192 aaKnown RBP16.08■□□□□ 0.16
PSMC1-204ENST00000554624 CERKQ8TCT0 537 aa16.06■□□□□ 0.16
PSMC1-204ENST00000554624 ZNF777Q9ULD5 760 aaPredicted RBP16.06■□□□□ 0.16
PSMC1-204ENST00000554624 KDM5CP41229 1560 aa16.05■□□□□ 0.16
PSMC1-204ENST00000554624 TRAPPC8Q9Y2L5 1435 aa16.04■□□□□ 0.16
PSMC1-204ENST00000554624 MNX1P50219 401 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms