RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 BICRAQ9NZM4 1560 aa10.26□□□□□ -0.77
ATXN3-228ENST00000554592 LCE2DQ5TA82 110 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-228ENST00000554592 TMEM92Q6UXU6 159 aa10.25□□□□□ -0.77
ATXN3-228ENST00000554592 G3V3G9 751 aa10.23□□□□□ -0.77
ATXN3-228ENST00000554592 GTPBP6O43824 516 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-228ENST00000554592 PCDH10Q9P2E7 1040 aa10.22□□□□□ -0.77
ATXN3-228ENST00000554592 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
ATXN3-228ENST00000554592 SLC24A1O60721 1099 aa10.2□□□□□ -0.78
ATXN3-228ENST00000554592 BBXQ8WY36 941 aaPredicted RBP10.18□□□□□ -0.78
ATXN3-228ENST00000554592 KIF3CO14782 793 aa10.16□□□□□ -0.78
ATXN3-228ENST00000554592 RYDENQ9NUL5 291 aaKnown RBP10.16□□□□□ -0.78
ATXN3-228ENST00000554592 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
ATXN3-228ENST00000554592 SHROOM4Q9ULL8 1493 aa10.15□□□□□ -0.78
ATXN3-228ENST00000554592 CC2D2AQ9P2K1 1620 aa10.12□□□□□ -0.79
ATXN3-228ENST00000554592 HOXB3P14651 431 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-228ENST00000554592 C2orf72A6NCS6 295 aa10.1□□□□□ -0.79
ATXN3-228ENST00000554592 ST18O60284 1047 aa10.1□□□□□ -0.79
ATXN3-228ENST00000554592 SNPHO15079 494 aa10.09□□□□□ -0.79
ATXN3-228ENST00000554592 EIF4G1Q04637 1599 aaKnown RBP10.05□□□□□ -0.8
ATXN3-228ENST00000554592 CDAN1Q8IWY9 1227 aa10.05□□□□□ -0.8
ATXN3-228ENST00000554592 GPHNQ9NQX3 736 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-228ENST00000554592 SPRYD3Q8NCJ5 442 aa10.03□□□□□ -0.8
ATXN3-228ENST00000554592 CRISPLD2Q9H0B8 497 aa10.03□□□□□ -0.8
ATXN3-228ENST00000554592 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-228ENST00000554592 NCKAP5LQ9HCH0 1330 aa10.03□□□□□ -0.8
ATXN3-228ENST00000554592 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.8
ATXN3-228ENST00000554592 CADPS2Q86UW7 1296 aa10.02□□□□□ -0.81
ATXN3-228ENST00000554592 TMC2Q8TDI7 906 aa10.02□□□□□ -0.81
ATXN3-228ENST00000554592 FOXK1P85037 733 aa10.01□□□□□ -0.81
ATXN3-228ENST00000554592 DOK7Q18PE1 504 aa10□□□□□ -0.81
ATXN3-228ENST00000554592 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
ATXN3-228ENST00000554592 PAXIP1Q6ZW49 1069 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-228ENST00000554592 DSG2Q14126 1118 aa9.98□□□□□ -0.81
ATXN3-228ENST00000554592 SCRIBQ14160 1630 aa9.97□□□□□ -0.81
ATXN3-228ENST00000554592 GPR153Q6NV75 609 aa9.97□□□□□ -0.81
ATXN3-228ENST00000554592 SLC34A2O95436 690 aa9.96□□□□□ -0.82
ATXN3-228ENST00000554592 HOXB1P14653 301 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-228ENST00000554592 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
ATXN3-228ENST00000554592 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.82
ATXN3-228ENST00000554592 PLPP6Q8IY26 295 aa9.95□□□□□ -0.82
ATXN3-228ENST00000554592 PDE4AP27815 886 aa9.94□□□□□ -0.82
ATXN3-228ENST00000554592 MFSD10Q14728 455 aa9.94□□□□□ -0.82
ATXN3-228ENST00000554592 MARVELD3Q96A59 401 aa9.94□□□□□ -0.82
ATXN3-228ENST00000554592 ZNF710Q8N1W2 664 aa9.93□□□□□ -0.82
ATXN3-228ENST00000554592 POTEB3A0JP26 581 aa9.91□□□□□ -0.82
ATXN3-228ENST00000554592 RIMBP2O15034 1052 aa9.91□□□□□ -0.82
ATXN3-228ENST00000554592 ARSIQ5FYB1 569 aa9.91□□□□□ -0.82
ATXN3-228ENST00000554592 POTEBQ6S5H4 581 aa9.91□□□□□ -0.82
ATXN3-228ENST00000554592 LARP6Q9BRS8 491 aaKnown RBP9.91□□□□□ -0.82
ATXN3-228ENST00000554592 PLCB2Q00722 1185 aa9.9□□□□□ -0.82
ATXN3-228ENST00000554592 PPP1R15BQ5SWA1 713 aa9.9□□□□□ -0.82
ATXN3-228ENST00000554592 PTCD2Q8WV60 388 aaKnown RBP9.9□□□□□ -0.82
ATXN3-228ENST00000554592 KHSRPQ92945 711 aaKnown RBP eCLIP9.9□□□□□ -0.82
ATXN3-228ENST00000554592 KDM4FA0A1W2PPD8 638 aa9.88□□□□□ -0.83
ATXN3-228ENST00000554592 EMP3P54852 163 aa9.88□□□□□ -0.83
ATXN3-228ENST00000554592 DDX27Q96GQ7 796 aaKnown RBP9.88□□□□□ -0.83
ATXN3-228ENST00000554592 PCDHGA4Q9Y5G9 962 aa9.88□□□□□ -0.83
ATXN3-228ENST00000554592 OXER1Q8TDS5 423 aa9.85□□□□□ -0.83
ATXN3-228ENST00000554592 CUX2O14529 1486 aa9.85□□□□□ -0.83
ATXN3-228ENST00000554592 HS3ST6Q96QI5 342 aa9.84□□□□□ -0.83
ATXN3-228ENST00000554592 FAM205CA6NFA0 338 aa9.83□□□□□ -0.84
ATXN3-228ENST00000554592 TSHZ2Q9NRE2 1034 aa9.83□□□□□ -0.84
ATXN3-228ENST00000554592 NUDT7P0C024 238 aa9.82□□□□□ -0.84
ATXN3-228ENST00000554592 CAMK2BQ13554 666 aa9.82□□□□□ -0.84
ATXN3-228ENST00000554592 EMILIN3Q9NT22 766 aa9.81□□□□□ -0.84
ATXN3-228ENST00000554592 ERBB3P21860 1342 aa9.8□□□□□ -0.84
ATXN3-228ENST00000554592 ZNF316A6NFI3 1004 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-228ENST00000554592 SPNS2Q8IVW8 549 aa9.79□□□□□ -0.84
ATXN3-228ENST00000554592 ERCC6Q03468 1493 aa9.78□□□□□ -0.84
ATXN3-228ENST00000554592 MMRN1Q13201 1228 aa9.77□□□□□ -0.85
ATXN3-228ENST00000554592 VARS2Q5ST30 1063 aaKnown RBP9.77□□□□□ -0.85
ATXN3-228ENST00000554592 UPF1Q92900 1129 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATXN3-228ENST00000554592 LHX6Q9UPM6 363 aa9.77□□□□□ -0.85
ATXN3-228ENST00000554592 TBC1D12O60347 775 aa9.76□□□□□ -0.85
ATXN3-228ENST00000554592 HAP1P54257 671 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-228ENST00000554592 NCAPD3P42695 1498 aa9.74□□□□□ -0.85
ATXN3-228ENST00000554592 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
ATXN3-228ENST00000554592 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
ATXN3-228ENST00000554592 ANO8Q9HCE9 1232 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-228ENST00000554592 ZNF687Q8N1G0 1237 aa9.73□□□□□ -0.85
ATXN3-228ENST00000554592 EVI5O60447 810 aa9.7□□□□□ -0.86
ATXN3-228ENST00000554592 POTEEQ6S8J3 1075 aa9.7□□□□□ -0.86
ATXN3-228ENST00000554592 MAP3K9P80192 1104 aa9.69□□□□□ -0.86
ATXN3-228ENST00000554592 E2F4Q16254 413 aa9.68□□□□□ -0.86
ATXN3-228ENST00000554592 ARIH1Q9Y4X5 557 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-228ENST00000554592 DPYSL4O14531 572 aa9.67□□□□□ -0.86
ATXN3-228ENST00000554592 WDR70Q9NW82 654 aa9.67□□□□□ -0.86
ATXN3-228ENST00000554592 PSDA5PKW4 1024 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-228ENST00000554592 ATAD2BQ9ULI0 1458 aa9.65□□□□□ -0.87
ATXN3-228ENST00000554592 FOSBP53539 338 aa9.64□□□□□ -0.87
ATXN3-228ENST00000554592 PDIA6Q15084 440 aa9.61□□□□□ -0.87
ATXN3-228ENST00000554592 VSIG10Q8N0Z9 540 aa9.61□□□□□ -0.87
ATXN3-228ENST00000554592 JPH4Q96JJ6 628 aa9.61□□□□□ -0.87
ATXN3-228ENST00000554592 PTGER2P43116 358 aa9.6□□□□□ -0.87
ATXN3-228ENST00000554592 PPP4R3BQ5MIZ7 849 aa9.6□□□□□ -0.87
ATXN3-228ENST00000554592 ZNF454Q8N9F8 522 aa9.6□□□□□ -0.87
ATXN3-228ENST00000554592 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
ATXN3-228ENST00000554592 AXIN2Q9Y2T1 843 aa9.6□□□□□ -0.87
ATXN3-228ENST00000554592 NESP48681 1621 aa9.6□□□□□ -0.87
ATXN3-228ENST00000554592 PBX2P40425 430 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms