RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 FYCO1Q9BQS8 1478 aa12.22□□□□□ -0.45
LINC00640-201ENST00000554409 KIF14Q15058 1648 aa12.21□□□□□ -0.46
LINC00640-201ENST00000554409 MYO5CQ9NQX4 1742 aa12.2□□□□□ -0.46
LINC00640-201ENST00000554409 TROQ12816 1431 aaPredicted RBP12.2□□□□□ -0.46
LINC00640-201ENST00000554409 CDK11AQ9UQ88 783 aaPredicted RBP12.19□□□□□ -0.46
LINC00640-201ENST00000554409 FRMPD1Q5SYB0 1578 aa12.18□□□□□ -0.46
LINC00640-201ENST00000554409 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
LINC00640-201ENST00000554409 FANCAO15360 1455 aa12.18□□□□□ -0.46
LINC00640-201ENST00000554409 CEP162Q5TB80 1403 aa12.18□□□□□ -0.46
LINC00640-201ENST00000554409 RICTORQ6R327 1708 aa12.17□□□□□ -0.46
LINC00640-201ENST00000554409 PLCH2O75038 1416 aa12.17□□□□□ -0.46
LINC00640-201ENST00000554409 AKNAQ7Z591 1439 aa12.15□□□□□ -0.46
LINC00640-201ENST00000554409 ZMYM4Q5VZL5 1548 aa12.13□□□□□ -0.47
LINC00640-201ENST00000554409 PREX2Q70Z35 1606 aa12.13□□□□□ -0.47
LINC00640-201ENST00000554409 CDC42BPBQ9Y5S2 1711 aa12.13□□□□□ -0.47
LINC00640-201ENST00000554409 DENND4BO75064 1496 aaPredicted RBP12.13□□□□□ -0.47
LINC00640-201ENST00000554409 KDM4FA0A1W2PPD8 638 aa12.12□□□□□ -0.47
LINC00640-201ENST00000554409 ADGRL1O94910 1474 aa12.12□□□□□ -0.47
LINC00640-201ENST00000554409 CDC42BPAQ5VT25 1732 aa12.11□□□□□ -0.47
LINC00640-201ENST00000554409 ARHGEF40Q8TER5 1519 aa12.11□□□□□ -0.47
LINC00640-201ENST00000554409 RAPGEF3O95398 923 aa12.1□□□□□ -0.47
LINC00640-201ENST00000554409 ARHGAP5Q13017 1502 aa12.1□□□□□ -0.47
LINC00640-201ENST00000554409 POGZQ7Z3K3 1410 aa12.09□□□□□ -0.47
LINC00640-201ENST00000554409 EFCAB2Q5VUJ9 269 aa12.08□□□□□ -0.48
LINC00640-201ENST00000554409 MAGI2Q86UL8 1455 aa12.08□□□□□ -0.48
LINC00640-201ENST00000554409 EHBP1L1Q8N3D4 1523 aa12.07□□□□□ -0.48
LINC00640-201ENST00000554409 LOC105371045A0A1W2PR82 267 aa12.07□□□□□ -0.48
LINC00640-201ENST00000554409 SCAPERQ9BY12 1400 aa12.07□□□□□ -0.48
LINC00640-201ENST00000554409 KDM5CP41229 1560 aa12.06□□□□□ -0.48
LINC00640-201ENST00000554409 ITSN2Q9NZM3 1697 aa12.06□□□□□ -0.48
LINC00640-201ENST00000554409 ABCC1P33527 1531 aa12.06□□□□□ -0.48
LINC00640-201ENST00000554409 ZFYVE16Q7Z3T8 1539 aa12.06□□□□□ -0.48
LINC00640-201ENST00000554409 VPS8Q8N3P4 1428 aa12.05□□□□□ -0.48
LINC00640-201ENST00000554409 ZNF518AQ6AHZ1 1483 aa12.05□□□□□ -0.48
LINC00640-201ENST00000554409 ADAMTSL3P82987 1691 aa12.04□□□□□ -0.48
LINC00640-201ENST00000554409 BCORL1Q5H9F3 1711 aa12.04□□□□□ -0.48
LINC00640-201ENST00000554409 TIAM1Q13009 1591 aa12.04□□□□□ -0.48
LINC00640-201ENST00000554409 MTUS2Q5JR59 1369 aa12.04□□□□□ -0.48
LINC00640-201ENST00000554409 GPATCH8Q9UKJ3 1502 aaKnown RBP12.03□□□□□ -0.48
LINC00640-201ENST00000554409 SAMD9LQ8IVG5 1584 aa12.02□□□□□ -0.49
LINC00640-201ENST00000554409 HECW2Q9P2P5 1572 aa12.02□□□□□ -0.49
LINC00640-201ENST00000554409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC00640-201ENST00000554409 SIGLEC1Q9BZZ2 1709 aa12.02□□□□□ -0.49
LINC00640-201ENST00000554409 YEATS2Q9ULM3 1422 aa12.02□□□□□ -0.49
LINC00640-201ENST00000554409 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
LINC00640-201ENST00000554409 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
LINC00640-201ENST00000554409 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
LINC00640-201ENST00000554409 SUPT6HQ7KZ85 1726 aaKnown RBP12□□□□□ -0.49
LINC00640-201ENST00000554409 CCNB3Q8WWL7 1395 aa11.99□□□□□ -0.49
LINC00640-201ENST00000554409 MLH3Q9UHC1 1453 aa11.99□□□□□ -0.49
LINC00640-201ENST00000554409 REREQ9P2R6 1566 aa11.99□□□□□ -0.49
LINC00640-201ENST00000554409 DIP2CQ9Y2E4 1556 aa11.98□□□□□ -0.49
LINC00640-201ENST00000554409 SYCP2Q9BX26 1530 aa11.98□□□□□ -0.49
LINC00640-201ENST00000554409 ATP10AO60312 1499 aa11.98□□□□□ -0.49
LINC00640-201ENST00000554409 PLEKHH2Q8IVE3 1493 aa11.98□□□□□ -0.49
LINC00640-201ENST00000554409 C9orf84Q5VXU9 1444 aa11.98□□□□□ -0.49
LINC00640-201ENST00000554409 TRAPPC8Q9Y2L5 1435 aa11.98□□□□□ -0.49
LINC00640-201ENST00000554409 ABCA6Q8N139 1617 aa11.97□□□□□ -0.49
LINC00640-201ENST00000554409 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
LINC00640-201ENST00000554409 KIAA1107Q9UPP5 1409 aa11.97□□□□□ -0.49
LINC00640-201ENST00000554409 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
LINC00640-201ENST00000554409 LRRC9Q6ZRR7 1453 aa11.96□□□□□ -0.49
LINC00640-201ENST00000554409 NCOA2Q15596 1464 aa11.95□□□□□ -0.5
LINC00640-201ENST00000554409 AFAP1Q8N556 730 aa11.95□□□□□ -0.5
LINC00640-201ENST00000554409 PTPRMP28827 1452 aa11.95□□□□□ -0.5
LINC00640-201ENST00000554409 RIMS1Q86UR5 1692 aaKnown RBP11.94□□□□□ -0.5
LINC00640-201ENST00000554409 ARID4BQ4LE39 1312 aaPredicted RBP11.94□□□□□ -0.5
LINC00640-201ENST00000554409 INO80Q9ULG1 1556 aaPredicted RBP11.94□□□□□ -0.5
LINC00640-201ENST00000554409 CFDP1Q9UEE9 299 aaPredicted RBP11.94□□□□□ -0.5
LINC00640-201ENST00000554409 FER1L4A9Z1Z3 1794 aa11.94□□□□□ -0.5
LINC00640-201ENST00000554409 AGLP35573 1532 aa11.92□□□□□ -0.5
LINC00640-201ENST00000554409 ATP7AQ04656 1500 aa11.92□□□□□ -0.5
LINC00640-201ENST00000554409 ZNF777Q9ULD5 760 aaPredicted RBP11.92□□□□□ -0.5
LINC00640-201ENST00000554409 MBD5Q9P267 1494 aa11.91□□□□□ -0.5
LINC00640-201ENST00000554409 CAMSAP2Q08AD1 1489 aa11.9□□□□□ -0.5
LINC00640-201ENST00000554409 HNRNPMP52272 730 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC00640-201ENST00000554409 ADGBQ8N7X0 1667 aa11.89□□□□□ -0.51
LINC00640-201ENST00000554409 PLXNC1O60486 1568 aa11.88□□□□□ -0.51
LINC00640-201ENST00000554409 ARHGEF5Q12774 1597 aa11.88□□□□□ -0.51
LINC00640-201ENST00000554409 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
LINC00640-201ENST00000554409 MYT1LQ9UL68 1186 aa11.88□□□□□ -0.51
LINC00640-201ENST00000554409 SPAG9O60271 1321 aaKnown RBP11.87□□□□□ -0.51
LINC00640-201ENST00000554409 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
LINC00640-201ENST00000554409 CCDC141Q6ZP82 1450 aa11.87□□□□□ -0.51
LINC00640-201ENST00000554409 ZNF644Q9H582 1327 aaPredicted RBP11.86□□□□□ -0.51
LINC00640-201ENST00000554409 RTEL1-TNFRSF6BF6WH68 1400 aa11.86□□□□□ -0.51
LINC00640-201ENST00000554409 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
LINC00640-201ENST00000554409 MIA2Q96PC5 1412 aa11.86□□□□□ -0.51
LINC00640-201ENST00000554409 APLP2Q06481 763 aa11.84□□□□□ -0.51
LINC00640-201ENST00000554409 RSPH4AQ5TD94 716 aa11.84□□□□□ -0.51
LINC00640-201ENST00000554409 A2MP01023 1474 aa11.83□□□□□ -0.52
LINC00640-201ENST00000554409 MLECQ14165 292 aa11.83□□□□□ -0.52
LINC00640-201ENST00000554409 MROH2AA6NES4 1674 aa11.83□□□□□ -0.52
LINC00640-201ENST00000554409 MAST1Q9Y2H9 1570 aa11.83□□□□□ -0.52
LINC00640-201ENST00000554409 LMTK3Q96Q04 1460 aa11.82□□□□□ -0.52
LINC00640-201ENST00000554409 C3P01024 1663 aa11.81□□□□□ -0.52
LINC00640-201ENST00000554409 CROCC2H7BZ55 1655 aa11.81□□□□□ -0.52
LINC00640-201ENST00000554409 PREX1Q8TCU6 1659 aa11.81□□□□□ -0.52
LINC00640-201ENST00000554409 CNTLNQ9NXG0 1405 aa11.8□□□□□ -0.52
LINC00640-201ENST00000554409 PTPN23Q9H3S7 1636 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms