RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 TMEM92Q6UXU6 159 aa12.3□□□□□ -0.44
ATXN3-226ENST00000554350 FBXO22Q8NEZ5 403 aa12.3□□□□□ -0.44
ATXN3-226ENST00000554350 MARVELD3Q96A59 401 aa12.3□□□□□ -0.44
ATXN3-226ENST00000554350 G3V3G9 751 aa12.29□□□□□ -0.44
ATXN3-226ENST00000554350 STK24Q9Y6E0 443 aa12.27□□□□□ -0.45
ATXN3-226ENST00000554350 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
ATXN3-226ENST00000554350 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
ATXN3-226ENST00000554350 STK25O00506 426 aa12.24□□□□□ -0.45
ATXN3-226ENST00000554350 MYO15BQ96JP2 1530 aa12.24□□□□□ -0.45
ATXN3-226ENST00000554350 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
ATXN3-226ENST00000554350 POTEB3A0JP26 581 aa12.22□□□□□ -0.45
ATXN3-226ENST00000554350 NLRP6P59044 892 aa12.22□□□□□ -0.45
ATXN3-226ENST00000554350 POTEBQ6S5H4 581 aa12.22□□□□□ -0.45
ATXN3-226ENST00000554350 EMP3P54852 163 aa12.18□□□□□ -0.46
ATXN3-226ENST00000554350 SCRIBQ14160 1630 aa12.15□□□□□ -0.46
ATXN3-226ENST00000554350 HOXB1P14653 301 aaPredicted RBP12.13□□□□□ -0.47
ATXN3-226ENST00000554350 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
ATXN3-226ENST00000554350 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
ATXN3-226ENST00000554350 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
ATXN3-226ENST00000554350 KRTAP3-3Q9BYR6 98 aa12.09□□□□□ -0.47
ATXN3-226ENST00000554350 KRTAP3-2Q9BYR7 98 aa12.09□□□□□ -0.47
ATXN3-226ENST00000554350 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
ATXN3-226ENST00000554350 KIF3CO14782 793 aa12.07□□□□□ -0.48
ATXN3-226ENST00000554350 PPP1R37O75864 691 aa12.06□□□□□ -0.48
ATXN3-226ENST00000554350 GPR153Q6NV75 609 aa12.05□□□□□ -0.48
ATXN3-226ENST00000554350 SPNS2Q8IVW8 549 aa12.05□□□□□ -0.48
ATXN3-226ENST00000554350 HS6ST3Q8IZP7 471 aa12.05□□□□□ -0.48
ATXN3-226ENST00000554350 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
ATXN3-226ENST00000554350 C2orf72A6NCS6 295 aa12.01□□□□□ -0.49
ATXN3-226ENST00000554350 RIMBP2O15034 1052 aa12.01□□□□□ -0.49
ATXN3-226ENST00000554350 MMRN1Q13201 1228 aa11.98□□□□□ -0.49
ATXN3-226ENST00000554350 ERBB3P21860 1342 aa11.97□□□□□ -0.49
ATXN3-226ENST00000554350 ARSIQ5FYB1 569 aa11.96□□□□□ -0.49
ATXN3-226ENST00000554350 NKX1-1Q15270 411 aaPredicted RBP11.95□□□□□ -0.5
ATXN3-226ENST00000554350 VARS2Q5ST30 1063 aaKnown RBP11.95□□□□□ -0.5
ATXN3-226ENST00000554350 KHSRPQ92945 711 aaKnown RBP eCLIP11.95□□□□□ -0.5
ATXN3-226ENST00000554350 CHGAP10645 457 aaKnown RBP11.94□□□□□ -0.5
ATXN3-226ENST00000554350 SLC34A2O95436 690 aa11.88□□□□□ -0.51
ATXN3-226ENST00000554350 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
ATXN3-226ENST00000554350 NESP48681 1621 aa11.86□□□□□ -0.51
ATXN3-226ENST00000554350 ZNF687Q8N1G0 1237 aa11.86□□□□□ -0.51
ATXN3-226ENST00000554350 ZNF316A6NFI3 1004 aaPredicted RBP11.85□□□□□ -0.51
ATXN3-226ENST00000554350 PCDHGA4Q9Y5G9 962 aa11.84□□□□□ -0.51
ATXN3-226ENST00000554350 DCAF1Q9Y4B6 1507 aa11.84□□□□□ -0.51
ATXN3-226ENST00000554350 ZCCHC6Q5VYS8 1495 aaKnown RBP11.83□□□□□ -0.52
ATXN3-226ENST00000554350 NUDT7P0C024 238 aa11.82□□□□□ -0.52
ATXN3-226ENST00000554350 THOC2Q8NI27 1593 aaKnown RBP11.82□□□□□ -0.52
ATXN3-226ENST00000554350 FOXK1P85037 733 aa11.8□□□□□ -0.52
ATXN3-226ENST00000554350 GPHNQ9NQX3 736 aaPredicted RBP11.8□□□□□ -0.52
ATXN3-226ENST00000554350 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
ATXN3-226ENST00000554350 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
ATXN3-226ENST00000554350 DSG2Q14126 1118 aa11.77□□□□□ -0.53
ATXN3-226ENST00000554350 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
ATXN3-226ENST00000554350 PLPP6Q8IY26 295 aa11.76□□□□□ -0.53
ATXN3-226ENST00000554350 PTCD2Q8WV60 388 aaKnown RBP11.76□□□□□ -0.53
ATXN3-226ENST00000554350 POTEEQ6S8J3 1075 aa11.75□□□□□ -0.53
ATXN3-226ENST00000554350 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
ATXN3-226ENST00000554350 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
ATXN3-226ENST00000554350 CRISPLD2Q9H0B8 497 aa11.72□□□□□ -0.53
ATXN3-226ENST00000554350 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
ATXN3-226ENST00000554350 BAZ1AQ9NRL2 1556 aaPredicted RBP11.7□□□□□ -0.54
ATXN3-226ENST00000554350 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
ATXN3-226ENST00000554350 LSM11P83369 360 aaKnown RBP eCLIP11.67□□□□□ -0.54
ATXN3-226ENST00000554350 KIF21AQ7Z4S6 1674 aa11.65□□□□□ -0.54
ATXN3-226ENST00000554350 AXIN2Q9Y2T1 843 aa11.65□□□□□ -0.54
ATXN3-226ENST00000554350 PBX2P40425 430 aa11.64□□□□□ -0.55
ATXN3-226ENST00000554350 ANKRD13DQ6ZTN6 518 aa11.64□□□□□ -0.55
ATXN3-226ENST00000554350 OXER1Q8TDS5 423 aa11.64□□□□□ -0.55
ATXN3-226ENST00000554350 RNF166Q96A37 237 aaPredicted RBP11.64□□□□□ -0.55
ATXN3-226ENST00000554350 MYT1LQ9UL68 1186 aa11.64□□□□□ -0.55
ATXN3-226ENST00000554350 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
ATXN3-226ENST00000554350 RIMBP3CA6NJZ7 1639 aa11.62□□□□□ -0.55
ATXN3-226ENST00000554350 RIMBP3BA6NNM3 1639 aa11.62□□□□□ -0.55
ATXN3-226ENST00000554350 RIMBP3Q9UFD9 1639 aa11.62□□□□□ -0.55
ATXN3-226ENST00000554350 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
ATXN3-226ENST00000554350 PDS5BQ9NTI5 1447 aa11.61□□□□□ -0.55
ATXN3-226ENST00000554350 LAMC3Q9Y6N6 1575 aa11.61□□□□□ -0.55
ATXN3-226ENST00000554350 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
ATXN3-226ENST00000554350 PSDA5PKW4 1024 aaPredicted RBP11.58□□□□□ -0.56
ATXN3-226ENST00000554350 PTGER2P43116 358 aa11.58□□□□□ -0.56
ATXN3-226ENST00000554350 PDE4AP27815 886 aa11.57□□□□□ -0.56
ATXN3-226ENST00000554350 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
ATXN3-226ENST00000554350 ARHGAP33O14559 1287 aa11.56□□□□□ -0.56
ATXN3-226ENST00000554350 TBC1D12O60347 775 aa11.56□□□□□ -0.56
ATXN3-226ENST00000554350 CADPS2Q86UW7 1296 aa11.56□□□□□ -0.56
ATXN3-226ENST00000554350 MFSD10Q14728 455 aa11.55□□□□□ -0.56
ATXN3-226ENST00000554350 MRC2Q9UBG0 1479 aa11.55□□□□□ -0.56
ATXN3-226ENST00000554350 DMRTA1Q5VZB9 504 aa11.54□□□□□ -0.56
ATXN3-226ENST00000554350 CYB5RLQ6IPT4 315 aa11.54□□□□□ -0.56
ATXN3-226ENST00000554350 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
ATXN3-226ENST00000554350 PSEN2P49810 448 aa11.53□□□□□ -0.56
ATXN3-226ENST00000554350 LARP6Q9BRS8 491 aaKnown RBP11.53□□□□□ -0.56
ATXN3-226ENST00000554350 PPP4R3BQ5MIZ7 849 aa11.51□□□□□ -0.57
ATXN3-226ENST00000554350 ADGRD1Q6QNK2 874 aa11.51□□□□□ -0.57
ATXN3-226ENST00000554350 DDX27Q96GQ7 796 aaKnown RBP11.51□□□□□ -0.57
ATXN3-226ENST00000554350 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
ATXN3-226ENST00000554350 WDR62O43379 1518 aa11.5□□□□□ -0.57
ATXN3-226ENST00000554350 ANO8Q9HCE9 1232 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-226ENST00000554350 HRO43593 1189 aa11.48□□□□□ -0.57
ATXN3-226ENST00000554350 EMILIN3Q9NT22 766 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms