RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 POGZQ7Z3K3 1410 aa30.55■■■□□ 2.48
CPSF2-203ENST00000554290 CASKIN1Q8WXD9 1431 aa30.54■■■□□ 2.48
CPSF2-203ENST00000554290 MYO5CQ9NQX4 1742 aa30.53■■■□□ 2.48
CPSF2-203ENST00000554290 YEATS2Q9ULM3 1422 aa30.53■■■□□ 2.48
CPSF2-203ENST00000554290 MADDQ8WXG6 1647 aa30.5■■■□□ 2.47
CPSF2-203ENST00000554290 CCDC18Q5T9S5 1454 aa30.5■■■□□ 2.47
CPSF2-203ENST00000554290 ARHGAP5Q13017 1502 aa30.47■■■□□ 2.47
CPSF2-203ENST00000554290 PCF11O94913 1555 aaKnown RBP30.46■■■□□ 2.47
CPSF2-203ENST00000554290 LRRIQ1Q96JM4 1722 aa30.46■■■□□ 2.47
CPSF2-203ENST00000554290 ZNF518AQ6AHZ1 1483 aa30.42■■■□□ 2.46
CPSF2-203ENST00000554290 ATP10AO60312 1499 aa30.41■■■□□ 2.46
CPSF2-203ENST00000554290 FYCO1Q9BQS8 1478 aa30.41■■■□□ 2.46
CPSF2-203ENST00000554290 MLECQ14165 292 aa30.39■■■□□ 2.46
CPSF2-203ENST00000554290 AFAP1Q8N556 730 aa30.39■■■□□ 2.46
CPSF2-203ENST00000554290 ILDR1Q86SU0 546 aaPredicted RBP30.38■■■□□ 2.45
CPSF2-203ENST00000554290 RIMS1Q86UR5 1692 aaKnown RBP30.38■■■□□ 2.45
CPSF2-203ENST00000554290 MYT1LQ9UL68 1186 aa30.36■■■□□ 2.45
CPSF2-203ENST00000554290 C9orf84Q5VXU9 1444 aa30.36■■■□□ 2.45
CPSF2-203ENST00000554290 SIGLEC1Q9BZZ2 1709 aa30.34■■■□□ 2.45
CPSF2-203ENST00000554290 CDC42BPBQ9Y5S2 1711 aa30.31■■■□□ 2.44
CPSF2-203ENST00000554290 PLPPR3Q6T4P5 718 aa30.31■■■□□ 2.44
CPSF2-203ENST00000554290 KDM5CP41229 1560 aa30.31■■■□□ 2.44
CPSF2-203ENST00000554290 PREX2Q70Z35 1606 aa30.29■■■□□ 2.44
CPSF2-203ENST00000554290 LMTK3Q96Q04 1460 aa30.28■■■□□ 2.44
CPSF2-203ENST00000554290 MLH3Q9UHC1 1453 aa30.25■■■□□ 2.43
CPSF2-203ENST00000554290 ARHGEF12Q9NZN5 1544 aa30.24■■■□□ 2.43
CPSF2-203ENST00000554290 ABCC1P33527 1531 aa30.23■■■□□ 2.43
CPSF2-203ENST00000554290 FER1L4A9Z1Z3 1794 aa30.23■■■□□ 2.43
CPSF2-203ENST00000554290 TRAPPC8Q9Y2L5 1435 aa30.22■■■□□ 2.43
CPSF2-203ENST00000554290 ZNF777Q9ULD5 760 aaPredicted RBP30.2■■■□□ 2.43
CPSF2-203ENST00000554290 DIP2CQ9Y2E4 1556 aa30.19■■■□□ 2.42
CPSF2-203ENST00000554290 CDC42BPAQ5VT25 1732 aa30.19■■■□□ 2.42
CPSF2-203ENST00000554290 REREQ9P2R6 1566 aa30.16■■■□□ 2.42
CPSF2-203ENST00000554290 ITSN2Q9NZM3 1697 aa30.16■■■□□ 2.42
CPSF2-203ENST00000554290 GPATCH8Q9UKJ3 1502 aaKnown RBP30.16■■■□□ 2.42
CPSF2-203ENST00000554290 MTUS2Q5JR59 1369 aa30.15■■■□□ 2.42
CPSF2-203ENST00000554290 HSPA2P54652 639 aa30.15■■■□□ 2.42
CPSF2-203ENST00000554290 CFDP1Q9UEE9 299 aaPredicted RBP30.13■■■□□ 2.41
CPSF2-203ENST00000554290 ABCA6Q8N139 1617 aa30.13■■■□□ 2.41
CPSF2-203ENST00000554290 CCNB3Q8WWL7 1395 aa30.13■■■□□ 2.41
CPSF2-203ENST00000554290 CEBPAP49715 358 aaPredicted RBP30.11■■■□□ 2.41
CPSF2-203ENST00000554290 CEP162Q5TB80 1403 aa30.1■■■□□ 2.41
CPSF2-203ENST00000554290 AGLP35573 1532 aa30.09■■■□□ 2.41
CPSF2-203ENST00000554290 HNRNPMP52272 730 aaKnown RBP eCLIP30.09■■■□□ 2.41
CPSF2-203ENST00000554290 ESF1Q9H501 851 aaKnown RBP30.09■■■□□ 2.41
CPSF2-203ENST00000554290 SAMD9LQ8IVG5 1584 aa30.08■■■□□ 2.41
CPSF2-203ENST00000554290 SPAG9O60271 1321 aaKnown RBP30.07■■■□□ 2.4
CPSF2-203ENST00000554290 PLEKHH2Q8IVE3 1493 aa30.06■■■□□ 2.4
CPSF2-203ENST00000554290 SYCP2Q9BX26 1530 aa30.06■■■□□ 2.4
CPSF2-203ENST00000554290 KIAA1107Q9UPP5 1409 aa30.05■■■□□ 2.4
CPSF2-203ENST00000554290 KIDINS220Q9ULH0 1771 aa30.05■■■□□ 2.4
CPSF2-203ENST00000554290 FBXO41Q8TF61 875 aa30.03■■■□□ 2.4
CPSF2-203ENST00000554290 EHBP1L1Q8N3D4 1523 aa29.99■■■□□ 2.39
CPSF2-203ENST00000554290 PREX1Q8TCU6 1659 aa29.98■■■□□ 2.39
CPSF2-203ENST00000554290 UHRF1BP1Q6BDS2 1440 aa29.96■■■□□ 2.39
CPSF2-203ENST00000554290 CNTLNQ9NXG0 1405 aa29.96■■■□□ 2.39
CPSF2-203ENST00000554290 ATP7AQ04656 1500 aa29.94■■■□□ 2.38
CPSF2-203ENST00000554290 TIAM1Q13009 1591 aa29.91■■■□□ 2.38
CPSF2-203ENST00000554290 ZNF644Q9H582 1327 aaPredicted RBP29.91■■■□□ 2.38
CPSF2-203ENST00000554290 SETD1BQ9UPS6 1966 aaKnown RBP29.9■■■□□ 2.38
CPSF2-203ENST00000554290 C3P01024 1663 aa29.88■■■□□ 2.37
CPSF2-203ENST00000554290 DMRT2Q9Y5R5 561 aa29.88■■■□□ 2.37
CPSF2-203ENST00000554290 INO80Q9ULG1 1556 aaPredicted RBP29.88■■■□□ 2.37
CPSF2-203ENST00000554290 A2MP01023 1474 aa29.87■■■□□ 2.37
CPSF2-203ENST00000554290 LOC105371045A0A1W2PR82 267 aa29.86■■■□□ 2.37
CPSF2-203ENST00000554290 SUPT6HQ7KZ85 1726 aaKnown RBP29.83■■■□□ 2.37
CPSF2-203ENST00000554290 MBD5Q9P267 1494 aa29.83■■■□□ 2.37
CPSF2-203ENST00000554290 PLXNC1O60486 1568 aa29.81■■■□□ 2.36
CPSF2-203ENST00000554290 NCOA2Q15596 1464 aa29.81■■■□□ 2.36
CPSF2-203ENST00000554290 ZMYM3Q14202 1370 aa29.81■■■□□ 2.36
CPSF2-203ENST00000554290 GGT6Q6P531 493 aa29.8■■■□□ 2.36
CPSF2-203ENST00000554290 RTEL1-TNFRSF6BF6WH68 1400 aa29.79■■■□□ 2.36
CPSF2-203ENST00000554290 VPS8Q8N3P4 1428 aa29.79■■■□□ 2.36
CPSF2-203ENST00000554290 CERKQ8TCT0 537 aa29.79■■■□□ 2.36
CPSF2-203ENST00000554290 RSPH4AQ5TD94 716 aa29.78■■■□□ 2.36
CPSF2-203ENST00000554290 PPP6R1Q9UPN7 881 aa29.78■■■□□ 2.36
CPSF2-203ENST00000554290 MROH2AA6NES4 1674 aa29.78■■■□□ 2.36
CPSF2-203ENST00000554290 NPATQ14207 1427 aa29.78■■■□□ 2.36
CPSF2-203ENST00000554290 ADGBQ8N7X0 1667 aa29.76■■■□□ 2.35
CPSF2-203ENST00000554290 STRCQ7RTU9 1775 aa29.73■■■□□ 2.35
CPSF2-203ENST00000554290 DHX29Q7Z478 1369 aaKnown RBP29.72■■■□□ 2.35
CPSF2-203ENST00000554290 CAMSAP2Q08AD1 1489 aa29.72■■■□□ 2.35
CPSF2-203ENST00000554290 CCDC141Q6ZP82 1450 aa29.72■■■□□ 2.35
CPSF2-203ENST00000554290 LRRC9Q6ZRR7 1453 aa29.69■■■□□ 2.34
CPSF2-203ENST00000554290 PTPRTO14522 1441 aa29.69■■■□□ 2.34
CPSF2-203ENST00000554290 CLTCQ00610 1675 aaKnown RBP29.69■■■□□ 2.34
CPSF2-203ENST00000554290 TSPY4P0CV99 314 aa29.66■■■□□ 2.34
CPSF2-203ENST00000554290 TSPY10P0CW01 314 aa29.66■■■□□ 2.34
CPSF2-203ENST00000554290 KIF3BO15066 747 aa29.64■■■□□ 2.34
CPSF2-203ENST00000554290 PTPRKQ15262 1439 aa29.63■■■□□ 2.33
CPSF2-203ENST00000554290 NCOA1Q15788 1441 aa29.63■■■□□ 2.33
CPSF2-203ENST00000554290 MAP3K1Q13233 1512 aa29.63■■■□□ 2.33
CPSF2-203ENST00000554290 ARHGEF5Q12774 1597 aa29.6■■■□□ 2.33
CPSF2-203ENST00000554290 KANK4Q5T7N3 995 aaPredicted RBP29.6■■■□□ 2.33
CPSF2-203ENST00000554290 CAMSAP1Q5T5Y3 1602 aa29.57■■■□□ 2.32
CPSF2-203ENST00000554290 MYO3AQ8NEV4 1616 aa29.53■■■□□ 2.32
CPSF2-203ENST00000554290 WASHC2CQ9Y4E1 1318 aa29.53■■■□□ 2.32
CPSF2-203ENST00000554290 APLP2Q06481 763 aa29.53■■■□□ 2.32
CPSF2-203ENST00000554290 MYOM3Q5VTT5 1437 aa29.53■■■□□ 2.32
CPSF2-203ENST00000554290 MIA2Q96PC5 1412 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms