RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 ZNF777Q9ULD5 760 aaPredicted RBP15.79■□□□□ 0.12
TMEM55B-205ENST00000554028 GPATCH8Q9UKJ3 1502 aaKnown RBP15.78■□□□□ 0.12
TMEM55B-205ENST00000554028 ABCC10Q5T3U5 1492 aa15.78■□□□□ 0.12
TMEM55B-205ENST00000554028 MAPKBP1O60336 1514 aa15.77■□□□□ 0.11
TMEM55B-205ENST00000554028 ITGAEP38570 1179 aa15.76■□□□□ 0.11
TMEM55B-205ENST00000554028 EFCAB2Q5VUJ9 269 aa15.76■□□□□ 0.11
TMEM55B-205ENST00000554028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.11
TMEM55B-205ENST00000554028 ITSN2Q9NZM3 1697 aa15.74■□□□□ 0.11
TMEM55B-205ENST00000554028 PLCH2O75038 1416 aa15.74■□□□□ 0.11
TMEM55B-205ENST00000554028 PTPN23Q9H3S7 1636 aa15.72■□□□□ 0.11
TMEM55B-205ENST00000554028 TCOF1Q13428 1488 aaKnown RBP15.71■□□□□ 0.11
TMEM55B-205ENST00000554028 FAM69CQ0P6D2 419 aa15.71■□□□□ 0.11
TMEM55B-205ENST00000554028 RSPH4AQ5TD94 716 aa15.71■□□□□ 0.11
TMEM55B-205ENST00000554028 ARHGAP5Q13017 1502 aa15.71■□□□□ 0.11
TMEM55B-205ENST00000554028 CD109Q6YHK3 1445 aa15.7■□□□□ 0.1
TMEM55B-205ENST00000554028 TTC37Q6PGP7 1564 aa15.7■□□□□ 0.1
TMEM55B-205ENST00000554028 ZNF644Q9H582 1327 aaPredicted RBP15.69■□□□□ 0.1
TMEM55B-205ENST00000554028 SCAF1Q9H7N4 1312 aaKnown RBP15.69■□□□□ 0.1
TMEM55B-205ENST00000554028 ABCA9Q8IUA7 1624 aa15.68■□□□□ 0.1
TMEM55B-205ENST00000554028 PLEKHH2Q8IVE3 1493 aa15.68■□□□□ 0.1
TMEM55B-205ENST00000554028 CAMSAP2Q08AD1 1489 aa15.67■□□□□ 0.1
TMEM55B-205ENST00000554028 TSPY4P0CV99 314 aa15.67■□□□□ 0.1
TMEM55B-205ENST00000554028 TSPY10P0CW01 314 aa15.67■□□□□ 0.1
TMEM55B-205ENST00000554028 ARAP3Q8WWN8 1544 aa15.67■□□□□ 0.1
TMEM55B-205ENST00000554028 MYO5CQ9NQX4 1742 aa15.66■□□□□ 0.1
TMEM55B-205ENST00000554028 PREX2Q70Z35 1606 aa15.66■□□□□ 0.1
TMEM55B-205ENST00000554028 CDC42BPAQ5VT25 1732 aa15.65■□□□□ 0.1
TMEM55B-205ENST00000554028 HNRNPMP52272 730 aaKnown RBP eCLIP15.65■□□□□ 0.1
TMEM55B-205ENST00000554028 GLI2P10070 1586 aa15.64■□□□□ 0.09
TMEM55B-205ENST00000554028 FANCAO15360 1455 aa15.64■□□□□ 0.09
TMEM55B-205ENST00000554028 KIAA1107Q9UPP5 1409 aa15.63■□□□□ 0.09
TMEM55B-205ENST00000554028 CHIC2Q9UKJ5 165 aa15.62■□□□□ 0.09
TMEM55B-205ENST00000554028 DAPK1P53355 1430 aa15.61■□□□□ 0.09
TMEM55B-205ENST00000554028 CDC42BPBQ9Y5S2 1711 aa15.61■□□□□ 0.09
TMEM55B-205ENST00000554028 ABCC5O15440 1437 aa15.6■□□□□ 0.09
TMEM55B-205ENST00000554028 DIP2BQ9P265 1576 aa15.59■□□□□ 0.09
TMEM55B-205ENST00000554028 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
TMEM55B-205ENST00000554028 AKNAQ7Z591 1439 aa15.59■□□□□ 0.09
TMEM55B-205ENST00000554028 SAMD9LQ8IVG5 1584 aa15.58■□□□□ 0.09
TMEM55B-205ENST00000554028 ANKRD30AQ9BXX3 1397 aa15.57■□□□□ 0.08
TMEM55B-205ENST00000554028 SCAPERQ9BY12 1400 aa15.57■□□□□ 0.08
TMEM55B-205ENST00000554028 ADGRL1O94910 1474 aa15.57■□□□□ 0.08
TMEM55B-205ENST00000554028 CCDC141Q6ZP82 1450 aa15.57■□□□□ 0.08
TMEM55B-205ENST00000554028 TEX14Q8IWB6 1497 aa15.57■□□□□ 0.08
TMEM55B-205ENST00000554028 NEO1Q92859 1461 aa15.57■□□□□ 0.08
TMEM55B-205ENST00000554028 MBD5Q9P267 1494 aa15.57■□□□□ 0.08
TMEM55B-205ENST00000554028 CFAP74Q9C0B2 1584 aa15.57■□□□□ 0.08
TMEM55B-205ENST00000554028 MYT1LQ9UL68 1186 aa15.56■□□□□ 0.08
TMEM55B-205ENST00000554028 ROCK1Q13464 1354 aa15.56■□□□□ 0.08
TMEM55B-205ENST00000554028 PTPRKQ15262 1439 aa15.56■□□□□ 0.08
TMEM55B-205ENST00000554028 ARHGEF5Q12774 1597 aa15.56■□□□□ 0.08
TMEM55B-205ENST00000554028 DNMT1P26358 1616 aaKnown RBP15.56■□□□□ 0.08
TMEM55B-205ENST00000554028 SYCP2Q9BX26 1530 aa15.55■□□□□ 0.08
TMEM55B-205ENST00000554028 SETD5Q9C0A6 1442 aa15.55■□□□□ 0.08
TMEM55B-205ENST00000554028 ACIN1Q9UKV3 1341 aaKnown RBP15.55■□□□□ 0.08
TMEM55B-205ENST00000554028 RRP7BPQ9NSQ0 103 aa15.55■□□□□ 0.08
TMEM55B-205ENST00000554028 MAP3K4Q9Y6R4 1608 aa15.54■□□□□ 0.08
TMEM55B-205ENST00000554028 HRCP23327 699 aa15.54■□□□□ 0.08
TMEM55B-205ENST00000554028 ABCC1P33527 1531 aa15.53■□□□□ 0.08
TMEM55B-205ENST00000554028 SHANK2Q9UPX8 1470 aa15.53■□□□□ 0.08
TMEM55B-205ENST00000554028 C9orf84Q5VXU9 1444 aa15.53■□□□□ 0.08
TMEM55B-205ENST00000554028 SPAG9O60271 1321 aaKnown RBP15.53■□□□□ 0.08
TMEM55B-205ENST00000554028 HFM1A2PYH4 1435 aa15.52■□□□□ 0.08
TMEM55B-205ENST00000554028 AFAP1Q8N556 730 aa15.52■□□□□ 0.08
TMEM55B-205ENST00000554028 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
TMEM55B-205ENST00000554028 ARHGEF12Q9NZN5 1544 aa15.5■□□□□ 0.07
TMEM55B-205ENST00000554028 DENND4BO75064 1496 aaPredicted RBP15.5■□□□□ 0.07
TMEM55B-205ENST00000554028 NCOA1Q15788 1441 aa15.5■□□□□ 0.07
TMEM55B-205ENST00000554028 RAB3GAP2Q9H2M9 1393 aa15.49■□□□□ 0.07
TMEM55B-205ENST00000554028 NAIPQ13075 1403 aa15.49■□□□□ 0.07
TMEM55B-205ENST00000554028 ADGRL2O95490 1459 aa15.48■□□□□ 0.07
TMEM55B-205ENST00000554028 ZNF518AQ6AHZ1 1483 aa15.48■□□□□ 0.07
TMEM55B-205ENST00000554028 RTEL1-TNFRSF6BF6WH68 1400 aa15.48■□□□□ 0.07
TMEM55B-205ENST00000554028 CCER1Q8TC90 406 aaPredicted RBP15.47■□□□□ 0.07
TMEM55B-205ENST00000554028 KIF15Q9NS87 1388 aa15.46■□□□□ 0.07
TMEM55B-205ENST00000554028 POGZQ7Z3K3 1410 aa15.45■□□□□ 0.06
TMEM55B-205ENST00000554028 RAPGEF3O95398 923 aa15.45■□□□□ 0.06
TMEM55B-205ENST00000554028 MAST1Q9Y2H9 1570 aa15.45■□□□□ 0.06
TMEM55B-205ENST00000554028 CROCC2H7BZ55 1655 aa15.44■□□□□ 0.06
TMEM55B-205ENST00000554028 TRIM52Q96A61 297 aa15.44■□□□□ 0.06
TMEM55B-205ENST00000554028 KIF13AQ9H1H9 1805 aa15.44■□□□□ 0.06
TMEM55B-205ENST00000554028 ANKRD50Q9ULJ7 1429 aa15.43■□□□□ 0.06
TMEM55B-205ENST00000554028 TSPOAP1O95153 1857 aa15.42■□□□□ 0.06
TMEM55B-205ENST00000554028 ADGBQ8N7X0 1667 aa15.42■□□□□ 0.06
TMEM55B-205ENST00000554028 MLH3Q9UHC1 1453 aa15.4■□□□□ 0.06
TMEM55B-205ENST00000554028 ATP7AQ04656 1500 aa15.39■□□□□ 0.05
TMEM55B-205ENST00000554028 GCC2Q8IWJ2 1684 aa15.38■□□□□ 0.05
TMEM55B-205ENST00000554028 PPRC1Q5VV67 1664 aaKnown RBP15.38■□□□□ 0.05
TMEM55B-205ENST00000554028 DUOX2Q9NRD8 1548 aa15.38■□□□□ 0.05
TMEM55B-205ENST00000554028 PLXNC1O60486 1568 aa15.37■□□□□ 0.05
TMEM55B-205ENST00000554028 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
TMEM55B-205ENST00000554028 ZFYVE16Q7Z3T8 1539 aa15.37■□□□□ 0.05
TMEM55B-205ENST00000554028 KDM5CP41229 1560 aa15.36■□□□□ 0.05
TMEM55B-205ENST00000554028 MAGI2Q86UL8 1455 aa15.36■□□□□ 0.05
TMEM55B-205ENST00000554028 DHX29Q7Z478 1369 aaKnown RBP15.36■□□□□ 0.05
TMEM55B-205ENST00000554028 ERBINQ96RT1 1412 aa15.35■□□□□ 0.05
TMEM55B-205ENST00000554028 HECW2Q9P2P5 1572 aa15.34■□□□□ 0.05
TMEM55B-205ENST00000554028 INO80Q9ULG1 1556 aaPredicted RBP15.34■□□□□ 0.05
TMEM55B-205ENST00000554028 ZEB1P37275 1124 aaPredicted RBP15.34■□□□□ 0.05
TMEM55B-205ENST00000554028 CLSPNQ9HAW4 1339 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms