RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 TTC37Q6PGP7 1564 aa17.87■□□□□ 0.45
NEK9-202ENST00000553823 PTPN23Q9H3S7 1636 aa17.87■□□□□ 0.45
NEK9-202ENST00000553823 FAM50AQ14320 339 aaKnown RBP17.86■□□□□ 0.45
NEK9-202ENST00000553823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.86■□□□□ 0.45
NEK9-202ENST00000553823 MYO5CQ9NQX4 1742 aa17.84■□□□□ 0.45
NEK9-202ENST00000553823 CFDP1Q9UEE9 299 aaPredicted RBP17.84■□□□□ 0.45
NEK9-202ENST00000553823 PREX2Q70Z35 1606 aa17.83■□□□□ 0.45
NEK9-202ENST00000553823 TCOF1Q13428 1488 aaKnown RBP17.83■□□□□ 0.45
NEK9-202ENST00000553823 ABCA9Q8IUA7 1624 aa17.83■□□□□ 0.44
NEK9-202ENST00000553823 CDC42BPBQ9Y5S2 1711 aa17.82■□□□□ 0.44
NEK9-202ENST00000553823 PLCH2O75038 1416 aa17.79■□□□□ 0.44
NEK9-202ENST00000553823 ARHGAP5Q13017 1502 aa17.77■□□□□ 0.44
NEK9-202ENST00000553823 CAMSAP2Q08AD1 1489 aa17.77■□□□□ 0.44
NEK9-202ENST00000553823 ZNF777Q9ULD5 760 aaPredicted RBP17.77■□□□□ 0.44
NEK9-202ENST00000553823 ARAP3Q8WWN8 1544 aa17.77■□□□□ 0.43
NEK9-202ENST00000553823 ZNF644Q9H582 1327 aaPredicted RBP17.76■□□□□ 0.43
NEK9-202ENST00000553823 ITGAEP38570 1179 aa17.76■□□□□ 0.43
NEK9-202ENST00000553823 GLI2P10070 1586 aa17.74■□□□□ 0.43
NEK9-202ENST00000553823 EFCAB2Q5VUJ9 269 aa17.73■□□□□ 0.43
NEK9-202ENST00000553823 SAMD9LQ8IVG5 1584 aa17.73■□□□□ 0.43
NEK9-202ENST00000553823 DIP2BQ9P265 1576 aa17.72■□□□□ 0.43
NEK9-202ENST00000553823 CD109Q6YHK3 1445 aa17.72■□□□□ 0.43
NEK9-202ENST00000553823 DNMT1P26358 1616 aaKnown RBP17.71■□□□□ 0.43
NEK9-202ENST00000553823 PLEKHH2Q8IVE3 1493 aa17.7■□□□□ 0.42
NEK9-202ENST00000553823 MAP3K4Q9Y6R4 1608 aa17.69■□□□□ 0.42
NEK9-202ENST00000553823 FANCAO15360 1455 aa17.69■□□□□ 0.42
NEK9-202ENST00000553823 ABCC5O15440 1437 aa17.68■□□□□ 0.42
NEK9-202ENST00000553823 DAPK1P53355 1430 aa17.68■□□□□ 0.42
NEK9-202ENST00000553823 FAM69CQ0P6D2 419 aa17.68■□□□□ 0.42
NEK9-202ENST00000553823 PTPRKQ15262 1439 aa17.68■□□□□ 0.42
NEK9-202ENST00000553823 KIAA1107Q9UPP5 1409 aa17.67■□□□□ 0.42
NEK9-202ENST00000553823 ARHGEF5Q12774 1597 aa17.66■□□□□ 0.42
NEK9-202ENST00000553823 CFAP74Q9C0B2 1584 aa17.66■□□□□ 0.42
NEK9-202ENST00000553823 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
NEK9-202ENST00000553823 MBD5Q9P267 1494 aa17.65■□□□□ 0.42
NEK9-202ENST00000553823 HNRNPMP52272 730 aaKnown RBP eCLIP17.65■□□□□ 0.42
NEK9-202ENST00000553823 RSPH4AQ5TD94 716 aa17.65■□□□□ 0.42
NEK9-202ENST00000553823 ABCC1P33527 1531 aa17.65■□□□□ 0.42
NEK9-202ENST00000553823 SYCP2Q9BX26 1530 aa17.65■□□□□ 0.42
NEK9-202ENST00000553823 CROCC2H7BZ55 1655 aa17.64■□□□□ 0.42
NEK9-202ENST00000553823 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
NEK9-202ENST00000553823 CHIC2Q9UKJ5 165 aa17.62■□□□□ 0.41
NEK9-202ENST00000553823 AKNAQ7Z591 1439 aa17.62■□□□□ 0.41
NEK9-202ENST00000553823 ARHGEF12Q9NZN5 1544 aa17.62■□□□□ 0.41
NEK9-202ENST00000553823 TSPOAP1O95153 1857 aa17.61■□□□□ 0.41
NEK9-202ENST00000553823 NEO1Q92859 1461 aa17.61■□□□□ 0.41
NEK9-202ENST00000553823 SHANK2Q9UPX8 1470 aa17.61■□□□□ 0.41
NEK9-202ENST00000553823 TSPY4P0CV99 314 aa17.6■□□□□ 0.41
NEK9-202ENST00000553823 TSPY10P0CW01 314 aa17.6■□□□□ 0.41
NEK9-202ENST00000553823 ADGRL1O94910 1474 aa17.6■□□□□ 0.41
NEK9-202ENST00000553823 ADGBQ8N7X0 1667 aa17.6■□□□□ 0.41
NEK9-202ENST00000553823 ROCK1Q13464 1354 aa17.59■□□□□ 0.41
NEK9-202ENST00000553823 HFM1A2PYH4 1435 aa17.58■□□□□ 0.41
NEK9-202ENST00000553823 C9orf84Q5VXU9 1444 aa17.58■□□□□ 0.41
NEK9-202ENST00000553823 SCAPERQ9BY12 1400 aa17.58■□□□□ 0.41
NEK9-202ENST00000553823 SETD5Q9C0A6 1442 aa17.58■□□□□ 0.41
NEK9-202ENST00000553823 ADGRL2O95490 1459 aa17.57■□□□□ 0.4
NEK9-202ENST00000553823 PPRC1Q5VV67 1664 aaKnown RBP17.57■□□□□ 0.4
NEK9-202ENST00000553823 TRAPPC8Q9Y2L5 1435 aa17.56■□□□□ 0.4
NEK9-202ENST00000553823 RRP7BPQ9NSQ0 103 aa17.56■□□□□ 0.4
NEK9-202ENST00000553823 MAST1Q9Y2H9 1570 aa17.56■□□□□ 0.4
NEK9-202ENST00000553823 TEX14Q8IWB6 1497 aa17.56■□□□□ 0.4
NEK9-202ENST00000553823 NAIPQ13075 1403 aa17.55■□□□□ 0.4
NEK9-202ENST00000553823 ANKRD30AQ9BXX3 1397 aa17.55■□□□□ 0.4
NEK9-202ENST00000553823 NCOA1Q15788 1441 aa17.55■□□□□ 0.4
NEK9-202ENST00000553823 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
NEK9-202ENST00000553823 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
NEK9-202ENST00000553823 HRCP23327 699 aa17.52■□□□□ 0.4
NEK9-202ENST00000553823 AFAP1Q8N556 730 aa17.51■□□□□ 0.39
NEK9-202ENST00000553823 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
NEK9-202ENST00000553823 SPAG9O60271 1321 aaKnown RBP17.5■□□□□ 0.39
NEK9-202ENST00000553823 DENND4BO75064 1496 aaPredicted RBP17.5■□□□□ 0.39
NEK9-202ENST00000553823 RTEL1-TNFRSF6BF6WH68 1400 aa17.49■□□□□ 0.39
NEK9-202ENST00000553823 POGZQ7Z3K3 1410 aa17.49■□□□□ 0.39
NEK9-202ENST00000553823 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
NEK9-202ENST00000553823 PLXNC1O60486 1568 aa17.48■□□□□ 0.39
NEK9-202ENST00000553823 KIF15Q9NS87 1388 aa17.47■□□□□ 0.39
NEK9-202ENST00000553823 KDM5CP41229 1560 aa17.47■□□□□ 0.39
NEK9-202ENST00000553823 RICTORQ6R327 1708 aa17.47■□□□□ 0.39
NEK9-202ENST00000553823 ZFYVE16Q7Z3T8 1539 aa17.47■□□□□ 0.39
NEK9-202ENST00000553823 INO80Q9ULG1 1556 aaPredicted RBP17.46■□□□□ 0.39
NEK9-202ENST00000553823 ATP7AQ04656 1500 aa17.46■□□□□ 0.39
NEK9-202ENST00000553823 KDM6BO15054 1643 aa17.44■□□□□ 0.38
NEK9-202ENST00000553823 ANKRD50Q9ULJ7 1429 aa17.44■□□□□ 0.38
NEK9-202ENST00000553823 KIDINS220Q9ULH0 1771 aa17.43■□□□□ 0.38
NEK9-202ENST00000553823 RAPGEF3O95398 923 aa17.43■□□□□ 0.38
NEK9-202ENST00000553823 MYT1LQ9UL68 1186 aa17.43■□□□□ 0.38
NEK9-202ENST00000553823 ACIN1Q9UKV3 1341 aaKnown RBP17.43■□□□□ 0.38
NEK9-202ENST00000553823 MLH3Q9UHC1 1453 aa17.43■□□□□ 0.38
NEK9-202ENST00000553823 HECW2Q9P2P5 1572 aa17.42■□□□□ 0.38
NEK9-202ENST00000553823 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
NEK9-202ENST00000553823 DUOX2Q9NRD8 1548 aa17.42■□□□□ 0.38
NEK9-202ENST00000553823 FRMPD1Q5SYB0 1578 aa17.4■□□□□ 0.38
NEK9-202ENST00000553823 DHX57Q6P158 1386 aaKnown RBP17.39■□□□□ 0.37
NEK9-202ENST00000553823 ZMYM4Q5VZL5 1548 aa17.38■□□□□ 0.37
NEK9-202ENST00000553823 ERBINQ96RT1 1412 aa17.37■□□□□ 0.37
NEK9-202ENST00000553823 TRIM52Q96A61 297 aa17.36■□□□□ 0.37
NEK9-202ENST00000553823 COL17A1Q9UMD9 1497 aaPredicted RBP17.36■□□□□ 0.37
NEK9-202ENST00000553823 MAGI2Q86UL8 1455 aa17.34■□□□□ 0.37
NEK9-202ENST00000553823 ABCA6Q8N139 1617 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms