RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 TSPOAP1O95153 1857 aa14.35□□□□□ -0.11
CFAP54-204ENST00000553778 MAP3K4Q9Y6R4 1608 aa14.34□□□□□ -0.11
CFAP54-204ENST00000553778 CFAP43Q8NDM7 1665 aa14.34□□□□□ -0.11
CFAP54-204ENST00000553778 ABCA9Q8IUA7 1624 aa14.33□□□□□ -0.11
CFAP54-204ENST00000553778 TEX14Q8IWB6 1497 aa14.33□□□□□ -0.12
CFAP54-204ENST00000553778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.33□□□□□ -0.12
CFAP54-204ENST00000553778 MAGI3Q5TCQ9 1506 aa14.32□□□□□ -0.12
CFAP54-204ENST00000553778 KIF14Q15058 1648 aa14.31□□□□□ -0.12
CFAP54-204ENST00000553778 MAP3K1Q13233 1512 aa14.31□□□□□ -0.12
CFAP54-204ENST00000553778 TIAM1Q13009 1591 aa14.3□□□□□ -0.12
CFAP54-204ENST00000553778 KANK4Q5T7N3 995 aaPredicted RBP14.29□□□□□ -0.12
CFAP54-204ENST00000553778 RBM19Q9Y4C8 960 aaKnown RBP14.29□□□□□ -0.12
CFAP54-204ENST00000553778 PLCH2O75038 1416 aa14.28□□□□□ -0.12
CFAP54-204ENST00000553778 EHBP1L1Q8N3D4 1523 aa14.28□□□□□ -0.12
CFAP54-204ENST00000553778 LRRC9Q6ZRR7 1453 aa14.27□□□□□ -0.12
CFAP54-204ENST00000553778 TTC37Q6PGP7 1564 aa14.27□□□□□ -0.12
CFAP54-204ENST00000553778 PPRC1Q5VV67 1664 aaKnown RBP14.27□□□□□ -0.12
CFAP54-204ENST00000553778 EFCAB2Q5VUJ9 269 aa14.27□□□□□ -0.13
CFAP54-204ENST00000553778 PHLDB1Q86UU1 1377 aa14.27□□□□□ -0.13
CFAP54-204ENST00000553778 CCNB3Q8WWL7 1395 aa14.25□□□□□ -0.13
CFAP54-204ENST00000553778 FANCAO15360 1455 aa14.24□□□□□ -0.13
CFAP54-204ENST00000553778 FANCIQ9NVI1 1328 aa14.24□□□□□ -0.13
CFAP54-204ENST00000553778 NEO1Q92859 1461 aa14.24□□□□□ -0.13
CFAP54-204ENST00000553778 CFDP1Q9UEE9 299 aaPredicted RBP14.23□□□□□ -0.13
CFAP54-204ENST00000553778 MYO5CQ9NQX4 1742 aa14.22□□□□□ -0.13
CFAP54-204ENST00000553778 AKNAQ7Z591 1439 aa14.22□□□□□ -0.13
CFAP54-204ENST00000553778 ARHGAP5Q13017 1502 aa14.22□□□□□ -0.13
CFAP54-204ENST00000553778 ZNF777Q9ULD5 760 aaPredicted RBP14.22□□□□□ -0.13
CFAP54-204ENST00000553778 SUPT6HQ7KZ85 1726 aaKnown RBP14.21□□□□□ -0.13
CFAP54-204ENST00000553778 KDM6BO15054 1643 aa14.21□□□□□ -0.13
CFAP54-204ENST00000553778 ARAP3Q8WWN8 1544 aa14.21□□□□□ -0.13
CFAP54-204ENST00000553778 GPATCH8Q9UKJ3 1502 aaKnown RBP14.21□□□□□ -0.13
CFAP54-204ENST00000553778 NCOA2Q15596 1464 aa14.21□□□□□ -0.14
CFAP54-204ENST00000553778 CFAP74Q9C0B2 1584 aa14.2□□□□□ -0.14
CFAP54-204ENST00000553778 ERICH6BQ5W0A0 696 aa14.19□□□□□ -0.14
CFAP54-204ENST00000553778 COL17A1Q9UMD9 1497 aaPredicted RBP14.19□□□□□ -0.14
CFAP54-204ENST00000553778 RAPGEF3O95398 923 aa14.18□□□□□ -0.14
CFAP54-204ENST00000553778 CDC42BPBQ9Y5S2 1711 aa14.17□□□□□ -0.14
CFAP54-204ENST00000553778 SCAPERQ9BY12 1400 aa14.17□□□□□ -0.14
CFAP54-204ENST00000553778 ADGRL1O94910 1474 aa14.17□□□□□ -0.14
CFAP54-204ENST00000553778 PREX2Q70Z35 1606 aa14.17□□□□□ -0.14
CFAP54-204ENST00000553778 CDC42BPAQ5VT25 1732 aa14.17□□□□□ -0.14
CFAP54-204ENST00000553778 DENND4BO75064 1496 aaPredicted RBP14.16□□□□□ -0.14
CFAP54-204ENST00000553778 MSH5O43196 834 aa14.14□□□□□ -0.15
CFAP54-204ENST00000553778 ITSN2Q9NZM3 1697 aa14.13□□□□□ -0.15
CFAP54-204ENST00000553778 HNRNPMP52272 730 aaKnown RBP eCLIP14.13□□□□□ -0.15
CFAP54-204ENST00000553778 ZNF644Q9H582 1327 aaPredicted RBP14.12□□□□□ -0.15
CFAP54-204ENST00000553778 AFAP1Q8N556 730 aa14.12□□□□□ -0.15
CFAP54-204ENST00000553778 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
CFAP54-204ENST00000553778 MYOM3Q5VTT5 1437 aa14.12□□□□□ -0.15
CFAP54-204ENST00000553778 PLEKHH2Q8IVE3 1493 aa14.11□□□□□ -0.15
CFAP54-204ENST00000553778 MIA2Q96PC5 1412 aa14.11□□□□□ -0.15
CFAP54-204ENST00000553778 KIAA1107Q9UPP5 1409 aa14.1□□□□□ -0.15
CFAP54-204ENST00000553778 RSPH4AQ5TD94 716 aa14.1□□□□□ -0.15
CFAP54-204ENST00000553778 SAMD9LQ8IVG5 1584 aa14.09□□□□□ -0.15
CFAP54-204ENST00000553778 POGZQ7Z3K3 1410 aa14.09□□□□□ -0.15
CFAP54-204ENST00000553778 ZNF518AQ6AHZ1 1483 aa14.08□□□□□ -0.15
CFAP54-204ENST00000553778 ABCC1P33527 1531 aa14.08□□□□□ -0.16
CFAP54-204ENST00000553778 FKBP8Q14318 412 aa14.08□□□□□ -0.16
CFAP54-204ENST00000553778 ARHGEF12Q9NZN5 1544 aa14.08□□□□□ -0.16
CFAP54-204ENST00000553778 NEFLP07196 543 aa14.07□□□□□ -0.16
CFAP54-204ENST00000553778 TRAPPC8Q9Y2L5 1435 aa14.07□□□□□ -0.16
CFAP54-204ENST00000553778 RICTORQ6R327 1708 aa14.06□□□□□ -0.16
CFAP54-204ENST00000553778 CAMSAP2Q08AD1 1489 aa14.06□□□□□ -0.16
CFAP54-204ENST00000553778 SYCP2Q9BX26 1530 aa14.05□□□□□ -0.16
CFAP54-204ENST00000553778 TSPY4P0CV99 314 aa14.05□□□□□ -0.16
CFAP54-204ENST00000553778 TSPY10P0CW01 314 aa14.05□□□□□ -0.16
CFAP54-204ENST00000553778 FGD6Q6ZV73 1430 aa14.05□□□□□ -0.16
CFAP54-204ENST00000553778 MAGI2Q86UL8 1455 aa14.05□□□□□ -0.16
CFAP54-204ENST00000553778 FRMPD1Q5SYB0 1578 aa14.04□□□□□ -0.16
CFAP54-204ENST00000553778 SPAG9O60271 1321 aaKnown RBP14.04□□□□□ -0.16
CFAP54-204ENST00000553778 DEKP35659 375 aaKnown RBP14.03□□□□□ -0.16
CFAP54-204ENST00000553778 FAM50AQ14320 339 aaKnown RBP14.03□□□□□ -0.16
CFAP54-204ENST00000553778 MBD5Q9P267 1494 aa14.03□□□□□ -0.16
CFAP54-204ENST00000553778 ZMYM4Q5VZL5 1548 aa14.02□□□□□ -0.17
CFAP54-204ENST00000553778 MLH3Q9UHC1 1453 aa14.01□□□□□ -0.17
CFAP54-204ENST00000553778 KDM5CP41229 1560 aa14.01□□□□□ -0.17
CFAP54-204ENST00000553778 PTPN23Q9H3S7 1636 aa14.01□□□□□ -0.17
CFAP54-204ENST00000553778 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
CFAP54-204ENST00000553778 YEATS2Q9ULM3 1422 aa14□□□□□ -0.17
CFAP54-204ENST00000553778 CCDC141Q6ZP82 1450 aa14□□□□□ -0.17
CFAP54-204ENST00000553778 ZFYVE16Q7Z3T8 1539 aa14□□□□□ -0.17
CFAP54-204ENST00000553778 TCOF1Q13428 1488 aaKnown RBP13.99□□□□□ -0.17
CFAP54-204ENST00000553778 BCANQ96GW7 911 aa13.99□□□□□ -0.17
CFAP54-204ENST00000553778 ARID4BQ4LE39 1312 aaPredicted RBP13.98□□□□□ -0.17
CFAP54-204ENST00000553778 ANO8Q9HCE9 1232 aaPredicted RBP13.98□□□□□ -0.17
CFAP54-204ENST00000553778 ARHGEF5Q12774 1597 aa13.98□□□□□ -0.17
CFAP54-204ENST00000553778 HECW2Q9P2P5 1572 aa13.98□□□□□ -0.17
CFAP54-204ENST00000553778 DHX57Q6P158 1386 aaKnown RBP13.98□□□□□ -0.17
CFAP54-204ENST00000553778 ATP10AO60312 1499 aa13.97□□□□□ -0.17
CFAP54-204ENST00000553778 RTEL1-TNFRSF6BF6WH68 1400 aa13.97□□□□□ -0.17
CFAP54-204ENST00000553778 ATP7AQ04656 1500 aa13.95□□□□□ -0.18
CFAP54-204ENST00000553778 ARHGEF40Q8TER5 1519 aa13.95□□□□□ -0.18
CFAP54-204ENST00000553778 ABCC5O15440 1437 aa13.94□□□□□ -0.18
CFAP54-204ENST00000553778 KIDINS220Q9ULH0 1771 aa13.94□□□□□ -0.18
CFAP54-204ENST00000553778 DAPK1P53355 1430 aa13.94□□□□□ -0.18
CFAP54-204ENST00000553778 C9orf84Q5VXU9 1444 aa13.94□□□□□ -0.18
CFAP54-204ENST00000553778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.94□□□□□ -0.18
CFAP54-204ENST00000553778 CHIC2Q9UKJ5 165 aa13.93□□□□□ -0.18
CFAP54-204ENST00000553778 ITGAEP38570 1179 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms