RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 MTUS2Q5JR59 1369 aa16.25■□□□□ 0.19
HNRNPC-208ENST00000553753 VPS8Q8N3P4 1428 aa16.23■□□□□ 0.19
HNRNPC-208ENST00000553753 CDC42BPBQ9Y5S2 1711 aa16.22■□□□□ 0.19
HNRNPC-208ENST00000553753 PREX2Q70Z35 1606 aa16.21■□□□□ 0.19
HNRNPC-208ENST00000553753 POGZQ7Z3K3 1410 aa16.21■□□□□ 0.19
HNRNPC-208ENST00000553753 ZMYM4Q5VZL5 1548 aa16.19■□□□□ 0.18
HNRNPC-208ENST00000553753 CDC42BPAQ5VT25 1732 aa16.19■□□□□ 0.18
HNRNPC-208ENST00000553753 MAGI2Q86UL8 1455 aa16.19■□□□□ 0.18
HNRNPC-208ENST00000553753 GPATCH8Q9UKJ3 1502 aaKnown RBP16.18■□□□□ 0.18
HNRNPC-208ENST00000553753 AFAP1Q8N556 730 aa16.18■□□□□ 0.18
HNRNPC-208ENST00000553753 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
HNRNPC-208ENST00000553753 CCNB3Q8WWL7 1395 aa16.17■□□□□ 0.18
HNRNPC-208ENST00000553753 ZNF518AQ6AHZ1 1483 aa16.17■□□□□ 0.18
HNRNPC-208ENST00000553753 ZNF777Q9ULD5 760 aaPredicted RBP16.16■□□□□ 0.18
HNRNPC-208ENST00000553753 ARHGEF40Q8TER5 1519 aa16.16■□□□□ 0.18
HNRNPC-208ENST00000553753 YEATS2Q9ULM3 1422 aa16.16■□□□□ 0.18
HNRNPC-208ENST00000553753 CFDP1Q9UEE9 299 aaPredicted RBP16.15■□□□□ 0.18
HNRNPC-208ENST00000553753 ARID4BQ4LE39 1312 aaPredicted RBP16.15■□□□□ 0.18
HNRNPC-208ENST00000553753 ZFYVE16Q7Z3T8 1539 aa16.15■□□□□ 0.18
HNRNPC-208ENST00000553753 TIAM1Q13009 1591 aa16.14■□□□□ 0.17
HNRNPC-208ENST00000553753 ABCC1P33527 1531 aa16.14■□□□□ 0.17
HNRNPC-208ENST00000553753 ARHGEF12Q9NZN5 1544 aa16.13■□□□□ 0.17
HNRNPC-208ENST00000553753 KDM5CP41229 1560 aa16.12■□□□□ 0.17
HNRNPC-208ENST00000553753 MYT1LQ9UL68 1186 aa16.12■□□□□ 0.17
HNRNPC-208ENST00000553753 TRAPPC8Q9Y2L5 1435 aa16.12■□□□□ 0.17
HNRNPC-208ENST00000553753 SAMD9LQ8IVG5 1584 aa16.1■□□□□ 0.17
HNRNPC-208ENST00000553753 MAP3K1Q13233 1512 aa16.09■□□□□ 0.17
HNRNPC-208ENST00000553753 ATP10AO60312 1499 aa16.09■□□□□ 0.17
HNRNPC-208ENST00000553753 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
HNRNPC-208ENST00000553753 ITSN2Q9NZM3 1697 aa16.09■□□□□ 0.17
HNRNPC-208ENST00000553753 HNRNPMP52272 730 aaKnown RBP eCLIP16.09■□□□□ 0.175e-7■■■■□ 19.9
HNRNPC-208ENST00000553753 NCOA2Q15596 1464 aa16.09■□□□□ 0.17
HNRNPC-208ENST00000553753 MLH3Q9UHC1 1453 aa16.09■□□□□ 0.17
HNRNPC-208ENST00000553753 SUPT6HQ7KZ85 1726 aaKnown RBP16.09■□□□□ 0.17
HNRNPC-208ENST00000553753 KIAA1107Q9UPP5 1409 aa16.08■□□□□ 0.16
HNRNPC-208ENST00000553753 APLP2Q06481 763 aa16.08■□□□□ 0.16
HNRNPC-208ENST00000553753 KANK4Q5T7N3 995 aaPredicted RBP16.08■□□□□ 0.16
HNRNPC-208ENST00000553753 PLEKHH2Q8IVE3 1493 aa16.08■□□□□ 0.16
HNRNPC-208ENST00000553753 HECW2Q9P2P5 1572 aa16.07■□□□□ 0.16
HNRNPC-208ENST00000553753 BCORL1Q5H9F3 1711 aa16.07■□□□□ 0.16
HNRNPC-208ENST00000553753 SYCP2Q9BX26 1530 aa16.07■□□□□ 0.16
HNRNPC-208ENST00000553753 ADAMTSL3P82987 1691 aa16.06■□□□□ 0.16
HNRNPC-208ENST00000553753 ZNF644Q9H582 1327 aaPredicted RBP16.06■□□□□ 0.16
HNRNPC-208ENST00000553753 C9orf84Q5VXU9 1444 aa16.06■□□□□ 0.16
HNRNPC-208ENST00000553753 SIGLEC1Q9BZZ2 1709 aa16.04■□□□□ 0.16
HNRNPC-208ENST00000553753 SPAG9O60271 1321 aaKnown RBP16.04■□□□□ 0.16
HNRNPC-208ENST00000553753 DIP2CQ9Y2E4 1556 aa16.03■□□□□ 0.16
HNRNPC-208ENST00000553753 MLECQ14165 292 aa16.03■□□□□ 0.16
HNRNPC-208ENST00000553753 PTPRMP28827 1452 aa16.02■□□□□ 0.16
HNRNPC-208ENST00000553753 KIDINS220Q9ULH0 1771 aa16.02■□□□□ 0.15
HNRNPC-208ENST00000553753 ABCA6Q8N139 1617 aa16.01■□□□□ 0.15
HNRNPC-208ENST00000553753 MADDQ8WXG6 1647 aa16.01■□□□□ 0.15
HNRNPC-208ENST00000553753 MBD5Q9P267 1494 aa16.01■□□□□ 0.15
HNRNPC-208ENST00000553753 REREQ9P2R6 1566 aa15.99■□□□□ 0.15
HNRNPC-208ENST00000553753 RSPH4AQ5TD94 716 aa15.98■□□□□ 0.15
HNRNPC-208ENST00000553753 CAMSAP2Q08AD1 1489 aa15.98■□□□□ 0.15
HNRNPC-208ENST00000553753 ATP7AQ04656 1500 aa15.97■□□□□ 0.15
HNRNPC-208ENST00000553753 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
HNRNPC-208ENST00000553753 MYOM3Q5VTT5 1437 aa15.95■□□□□ 0.14
HNRNPC-208ENST00000553753 AGLP35573 1532 aa15.95■□□□□ 0.14
HNRNPC-208ENST00000553753 INO80Q9ULG1 1556 aaPredicted RBP15.95■□□□□ 0.14
HNRNPC-208ENST00000553753 MIA2Q96PC5 1412 aa15.95■□□□□ 0.14
HNRNPC-208ENST00000553753 CCDC141Q6ZP82 1450 aa15.93■□□□□ 0.14
HNRNPC-208ENST00000553753 RTEL1-TNFRSF6BF6WH68 1400 aa15.93■□□□□ 0.14
HNRNPC-208ENST00000553753 FER1L4A9Z1Z3 1794 aa15.93■□□□□ 0.14
HNRNPC-208ENST00000553753 TSPY4P0CV99 314 aa15.92■□□□□ 0.14
HNRNPC-208ENST00000553753 TSPY10P0CW01 314 aa15.92■□□□□ 0.14
HNRNPC-208ENST00000553753 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
HNRNPC-208ENST00000553753 A2MP01023 1474 aa15.91■□□□□ 0.14
HNRNPC-208ENST00000553753 ARHGEF5Q12774 1597 aa15.9■□□□□ 0.14
HNRNPC-208ENST00000553753 ESF1Q9H501 851 aaKnown RBP15.9■□□□□ 0.14
HNRNPC-208ENST00000553753 PLXNC1O60486 1568 aa15.88■□□□□ 0.13
HNRNPC-208ENST00000553753 ADGBQ8N7X0 1667 aa15.87■□□□□ 0.13
HNRNPC-208ENST00000553753 CEBPAP49715 358 aaPredicted RBP15.87■□□□□ 0.13
HNRNPC-208ENST00000553753 DHX29Q7Z478 1369 aaKnown RBP15.86■□□□□ 0.13
HNRNPC-208ENST00000553753 GGT6Q6P531 493 aa15.85■□□□□ 0.13
HNRNPC-208ENST00000553753 FGD6Q6ZV73 1430 aa15.84■□□□□ 0.13
HNRNPC-208ENST00000553753 PTPN23Q9H3S7 1636 aa15.84■□□□□ 0.13
HNRNPC-208ENST00000553753 CNTLNQ9NXG0 1405 aa15.84■□□□□ 0.13
HNRNPC-208ENST00000553753 LMTK3Q96Q04 1460 aa15.82■□□□□ 0.12
HNRNPC-208ENST00000553753 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
HNRNPC-208ENST00000553753 MAST1Q9Y2H9 1570 aa15.81■□□□□ 0.12
HNRNPC-208ENST00000553753 KIF3BO15066 747 aa15.81■□□□□ 0.12
HNRNPC-208ENST00000553753 TCOF1Q13428 1488 aaKnown RBP15.8■□□□□ 0.12
HNRNPC-208ENST00000553753 ZMYM3Q14202 1370 aa15.79■□□□□ 0.12
HNRNPC-208ENST00000553753 ABCC5O15440 1437 aa15.79■□□□□ 0.12
HNRNPC-208ENST00000553753 C3P01024 1663 aa15.79■□□□□ 0.12
HNRNPC-208ENST00000553753 SETD1BQ9UPS6 1966 aaKnown RBP15.79■□□□□ 0.12
HNRNPC-208ENST00000553753 DAPK1P53355 1430 aa15.77■□□□□ 0.12
HNRNPC-208ENST00000553753 SHANK2Q9UPX8 1470 aa15.77■□□□□ 0.11
HNRNPC-208ENST00000553753 MROH2AA6NES4 1674 aa15.76■□□□□ 0.11
HNRNPC-208ENST00000553753 HSPA2P54652 639 aa15.76■□□□□ 0.11
HNRNPC-208ENST00000553753 FAM50AQ14320 339 aaKnown RBP15.76■□□□□ 0.11
HNRNPC-208ENST00000553753 DNMT1P26358 1616 aaKnown RBP15.75■□□□□ 0.11
HNRNPC-208ENST00000553753 CLTCQ00610 1675 aaKnown RBP15.75■□□□□ 0.11
HNRNPC-208ENST00000553753 PPARGC1BQ86YN6 1023 aaKnown RBP15.75■□□□□ 0.11
HNRNPC-208ENST00000553753 PREX1Q8TCU6 1659 aa15.74■□□□□ 0.11
HNRNPC-208ENST00000553753 RRP7BPQ9NSQ0 103 aa15.74■□□□□ 0.11
HNRNPC-208ENST00000553753 CROCC2H7BZ55 1655 aa15.74■□□□□ 0.11
HNRNPC-208ENST00000553753 UHRF1BP1Q6BDS2 1440 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms