RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SAMD1Q6SPF0 538 aaPredicted RBP11.6□□□□□ -0.55
GTF2A1-203ENST00000553612 UPF2Q9HAU5 1272 aaKnown RBP11.59□□□□□ -0.55
GTF2A1-203ENST00000553612 KIAA1211Q6ZU35 1233 aa11.58□□□□□ -0.56
GTF2A1-203ENST00000553612 GPATCH11Q8N954 259 aa11.58□□□□□ -0.56
GTF2A1-203ENST00000553612 SIN3AQ96ST3 1273 aa11.58□□□□□ -0.56
GTF2A1-203ENST00000553612 CALRP27797 417 aaKnown RBP11.57□□□□□ -0.56
GTF2A1-203ENST00000553612 BECN1Q14457 450 aa11.57□□□□□ -0.56
GTF2A1-203ENST00000553612 CBX1P83916 185 aa11.57□□□□□ -0.56
GTF2A1-203ENST00000553612 HDAC5Q9UQL6 1122 aa11.56□□□□□ -0.56
GTF2A1-203ENST00000553612 ZBTB9Q96C00 473 aa11.55□□□□□ -0.56
GTF2A1-203ENST00000553612 MAP7D2Q96T17 732 aa11.54□□□□□ -0.56
GTF2A1-203ENST00000553612 FRAT2O75474 233 aaPredicted RBP11.53□□□□□ -0.56
GTF2A1-203ENST00000553612 KCNJ4P48050 445 aa11.53□□□□□ -0.56
GTF2A1-203ENST00000553612 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.52□□□□□ -0.56
GTF2A1-203ENST00000553612 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.56
GTF2A1-203ENST00000553612 STAC3Q96MF2 364 aa11.52□□□□□ -0.56
GTF2A1-203ENST00000553612 GTF2E1P29083 439 aaPredicted RBP11.52□□□□□ -0.57
GTF2A1-203ENST00000553612 RRAGDQ9NQL2 400 aaPredicted RBP11.51□□□□□ -0.57
GTF2A1-203ENST00000553612 IGSF3O75054 1194 aa11.5□□□□□ -0.57
GTF2A1-203ENST00000553612 RSPH4AQ5TD94 716 aa11.49□□□□□ -0.57
GTF2A1-203ENST00000553612 TMC1Q8TDI8 760 aa11.49□□□□□ -0.57
GTF2A1-203ENST00000553612 ERICH4A6NGS2 130 aa11.49□□□□□ -0.57
GTF2A1-203ENST00000553612 BCCIPQ9P287 314 aaKnown RBP eCLIP11.49□□□□□ -0.57
GTF2A1-203ENST00000553612 PLCD4Q9BRC7 762 aa11.48□□□□□ -0.57
GTF2A1-203ENST00000553612 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.48□□□□□ -0.57
GTF2A1-203ENST00000553612 UQCRHLA0A096LP55 91 aa11.48□□□□□ -0.57
GTF2A1-203ENST00000553612 UQCRHP07919 91 aa11.48□□□□□ -0.57
GTF2A1-203ENST00000553612 CHAF1AQ13111 956 aaPredicted RBP11.46□□□□□ -0.57
GTF2A1-203ENST00000553612 CLGNO14967 610 aa11.46□□□□□ -0.57
GTF2A1-203ENST00000553612 TEX2Q8IWB9 1127 aa11.45□□□□□ -0.58
GTF2A1-203ENST00000553612 CHMP4CQ96CF2 233 aa11.45□□□□□ -0.58
GTF2A1-203ENST00000553612 ZBTB12Q9Y330 459 aaPredicted RBP11.44□□□□□ -0.58
GTF2A1-203ENST00000553612 PDE4AP27815 886 aa11.44□□□□□ -0.58
GTF2A1-203ENST00000553612 ZNF592Q92610 1267 aa11.44□□□□□ -0.58
GTF2A1-203ENST00000553612 TRIM6-TRIM34B2RNG4 842 aa11.43□□□□□ -0.58
GTF2A1-203ENST00000553612 TRIM34Q9BYJ4 488 aa11.43□□□□□ -0.58
GTF2A1-203ENST00000553612 ZNF830Q96NB3 372 aaPredicted RBP11.43□□□□□ -0.58
GTF2A1-203ENST00000553612 CCDC66A2RUB6 948 aa11.43□□□□□ -0.58
GTF2A1-203ENST00000553612 TAF3Q5VWG9 929 aa11.42□□□□□ -0.58
GTF2A1-203ENST00000553612 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
GTF2A1-203ENST00000553612 MTERF4Q7Z6M4 381 aaKnown RBP11.42□□□□□ -0.58
GTF2A1-203ENST00000553612 ESPNB1AK53 854 aa11.41□□□□□ -0.58
GTF2A1-203ENST00000553612 MYCNP04198 464 aaPredicted RBP11.41□□□□□ -0.58
GTF2A1-203ENST00000553612 LMOD3Q0VAK6 560 aa11.41□□□□□ -0.58
GTF2A1-203ENST00000553612 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
GTF2A1-203ENST00000553612 TAOK2Q9UL54 1235 aa11.41□□□□□ -0.58
GTF2A1-203ENST00000553612 GOLGA6L6A8MZA4 724 aa11.4□□□□□ -0.59
GTF2A1-203ENST00000553612 POGKQ9P215 609 aa11.4□□□□□ -0.59
GTF2A1-203ENST00000553612 DNAJC2Q99543 621 aaKnown RBP11.39□□□□□ -0.59
GTF2A1-203ENST00000553612 TOMM22Q9NS69 142 aa11.39□□□□□ -0.59
GTF2A1-203ENST00000553612 SMAP1Q8IYB5 467 aaPredicted RBP11.39□□□□□ -0.59
GTF2A1-203ENST00000553612 BANK1Q8NDB2 785 aa11.39□□□□□ -0.59
GTF2A1-203ENST00000553612 GOLGA6L22H0YM25 854 aa11.39□□□□□ -0.59
GTF2A1-203ENST00000553612 ZBTB22O15209 634 aa11.39□□□□□ -0.59
GTF2A1-203ENST00000553612 GTF2A1P52655 376 aaPredicted RBP11.37□□□□□ -0.59
GTF2A1-203ENST00000553612 DCAF11Q8TEB1 546 aa11.36□□□□□ -0.59
GTF2A1-203ENST00000553612 MPNDQ8N594 471 aa11.36□□□□□ -0.59
GTF2A1-203ENST00000553612 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
GTF2A1-203ENST00000553612 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
GTF2A1-203ENST00000553612 TMX1Q9H3N1 280 aa11.36□□□□□ -0.59
GTF2A1-203ENST00000553612 PSMD1Q99460 953 aa11.35□□□□□ -0.59
GTF2A1-203ENST00000553612 PIK3R5Q8WYR1 880 aa11.35□□□□□ -0.59
GTF2A1-203ENST00000553612 GOLGA6L1Q8N7Z2 621 aa11.35□□□□□ -0.59
GTF2A1-203ENST00000553612 KIAA2012Q0VF49 1180 aa11.34□□□□□ -0.59
GTF2A1-203ENST00000553612 WASHC2AQ641Q2 1341 aa11.34□□□□□ -0.59
GTF2A1-203ENST00000553612 GOLIM4O00461 696 aa11.33□□□□□ -0.59
GTF2A1-203ENST00000553612 WASHC2CQ9Y4E1 1318 aa11.33□□□□□ -0.6
GTF2A1-203ENST00000553612 CLCN1P35523 988 aa11.33□□□□□ -0.6
GTF2A1-203ENST00000553612 TMED8Q6PL24 325 aaPredicted RBP11.33□□□□□ -0.6
GTF2A1-203ENST00000553612 AXDND1Q5T1B0 1012 aaPredicted RBP11.32□□□□□ -0.6
GTF2A1-203ENST00000553612 LETM1O95202 739 aaPredicted RBP11.32□□□□□ -0.6
GTF2A1-203ENST00000553612 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
GTF2A1-203ENST00000553612 HSP90AB1P08238 724 aaKnown RBP11.31□□□□□ -0.6
GTF2A1-203ENST00000553612 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
GTF2A1-203ENST00000553612 FOXD1Q16676 465 aa11.31□□□□□ -0.6
GTF2A1-203ENST00000553612 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.3□□□□□ -0.6
GTF2A1-203ENST00000553612 ZNF622Q969S3 477 aaKnown RBP eCLIP11.29□□□□□ -0.65e-8■■■■■ 31
GTF2A1-203ENST00000553612 MEX3CQ5U5Q3 659 aaKnown RBP11.29□□□□□ -0.6
GTF2A1-203ENST00000553612 TDO2P48775 406 aa11.29□□□□□ -0.6
GTF2A1-203ENST00000553612 PANK2Q9BZ23 570 aa11.29□□□□□ -0.6
GTF2A1-203ENST00000553612 MRE11P49959 708 aa11.29□□□□□ -0.6
GTF2A1-203ENST00000553612 FOXD4L5Q5VV16 416 aaPredicted RBP11.27□□□□□ -0.61
GTF2A1-203ENST00000553612 FOXD4L4Q8WXT5 416 aaPredicted RBP11.27□□□□□ -0.61
GTF2A1-203ENST00000553612 TIGD1Q96MW7 591 aa11.27□□□□□ -0.61
GTF2A1-203ENST00000553612 XPCQ01831 940 aaPredicted RBP11.26□□□□□ -0.61
GTF2A1-203ENST00000553612 MPHOSPH10O00566 681 aaKnown RBP11.26□□□□□ -0.61
GTF2A1-203ENST00000553612 SRPK2P78362 688 aaKnown RBP11.26□□□□□ -0.61
GTF2A1-203ENST00000553612 CSPP1Q1MSJ5 1256 aa11.26□□□□□ -0.61
GTF2A1-203ENST00000553612 HSP90AB3PQ58FF7 597 aa11.25□□□□□ -0.61
GTF2A1-203ENST00000553612 CNKSR2Q8WXI2 1034 aa11.25□□□□□ -0.61
GTF2A1-203ENST00000553612 GTPBP4Q9BZE4 634 aaKnown RBP11.25□□□□□ -0.61
GTF2A1-203ENST00000553612 PLIN1O60240 522 aa11.24□□□□□ -0.61
GTF2A1-203ENST00000553612 SETQ01105 290 aaPredicted RBP11.24□□□□□ -0.61
GTF2A1-203ENST00000553612 DEF6Q9H4E7 631 aa11.24□□□□□ -0.61
GTF2A1-203ENST00000553612 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.612e-10■□□□□ 9.2
GTF2A1-203ENST00000553612 DRC7Q8IY82 874 aa11.23□□□□□ -0.61
GTF2A1-203ENST00000553612 IBSPP21815 317 aaPredicted RBP11.23□□□□□ -0.61
GTF2A1-203ENST00000553612 SKAP1Q86WV1 359 aa11.23□□□□□ -0.61
GTF2A1-203ENST00000553612 CLSTN1O94985 981 aa11.23□□□□□ -0.61
GTF2A1-203ENST00000553612 GRPEL1Q9HAV7 217 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms