RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
ATXN3-219ENST00000553488 ASXL2Q76L83 1435 aa12.96□□□□□ -0.33
ATXN3-219ENST00000553488 MAP3K4Q9Y6R4 1608 aa12.96□□□□□ -0.33
ATXN3-219ENST00000553488 PLEKHG5O94827 1062 aa12.96□□□□□ -0.33
ATXN3-219ENST00000553488 TNIKQ9UKE5 1360 aa12.95□□□□□ -0.34
ATXN3-219ENST00000553488 PLB1Q6P1J6 1458 aa12.95□□□□□ -0.34
ATXN3-219ENST00000553488 DISP1Q96F81 1524 aa12.94□□□□□ -0.34
ATXN3-219ENST00000553488 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
ATXN3-219ENST00000553488 ADGRL1O94910 1474 aa12.93□□□□□ -0.34
ATXN3-219ENST00000553488 CARMIL2Q6F5E8 1435 aa12.93□□□□□ -0.34
ATXN3-219ENST00000553488 ZCCHC11Q5TAX3 1644 aaKnown RBP12.92□□□□□ -0.34
ATXN3-219ENST00000553488 KDM5BQ9UGL1 1544 aa12.92□□□□□ -0.34
ATXN3-219ENST00000553488 COL17A1Q9UMD9 1497 aaPredicted RBP12.91□□□□□ -0.34
ATXN3-219ENST00000553488 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
ATXN3-219ENST00000553488 EPRSP07814 1512 aaKnown RBP12.91□□□□□ -0.34
ATXN3-219ENST00000553488 UACAQ9BZF9 1416 aa12.9□□□□□ -0.34
ATXN3-219ENST00000553488 UGGT2Q9NYU1 1516 aa12.9□□□□□ -0.34
ATXN3-219ENST00000553488 KIAA0556O60303 1618 aa12.9□□□□□ -0.34
ATXN3-219ENST00000553488 NUBP1P53384 320 aa12.88□□□□□ -0.35
ATXN3-219ENST00000553488 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
ATXN3-219ENST00000553488 TTBK1Q5TCY1 1321 aaPredicted RBP12.86□□□□□ -0.35
ATXN3-219ENST00000553488 HECW2Q9P2P5 1572 aa12.86□□□□□ -0.35
ATXN3-219ENST00000553488 TEX14Q8IWB6 1497 aa12.85□□□□□ -0.35
ATXN3-219ENST00000553488 RASEFQ8IZ41 740 aa12.85□□□□□ -0.35
ATXN3-219ENST00000553488 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
ATXN3-219ENST00000553488 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
ATXN3-219ENST00000553488 CTTNBP2Q8WZ74 1663 aa12.85□□□□□ -0.35
ATXN3-219ENST00000553488 ILDR1Q86SU0 546 aaPredicted RBP12.84□□□□□ -0.35
ATXN3-219ENST00000553488 RAPGEF2Q9Y4G8 1499 aa12.83□□□□□ -0.36
ATXN3-219ENST00000553488 WDR7Q9Y4E6 1490 aa12.82□□□□□ -0.36
ATXN3-219ENST00000553488 CFAP43Q8NDM7 1665 aa12.82□□□□□ -0.36
ATXN3-219ENST00000553488 GABBR2O75899 941 aa12.8□□□□□ -0.36
ATXN3-219ENST00000553488 CCDC61Q9Y6R9 512 aa12.79□□□□□ -0.36
ATXN3-219ENST00000553488 ABCA8O94911 1581 aa12.78□□□□□ -0.36
ATXN3-219ENST00000553488 PAK3O75914 559 aaPredicted RBP12.78□□□□□ -0.36
ATXN3-219ENST00000553488 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
ATXN3-219ENST00000553488 CLCN6P51797 869 aa12.77□□□□□ -0.37
ATXN3-219ENST00000553488 KIF21BO75037 1637 aa12.77□□□□□ -0.37
ATXN3-219ENST00000553488 TSPYL2Q9H2G4 693 aaPredicted RBP12.75□□□□□ -0.37
ATXN3-219ENST00000553488 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
ATXN3-219ENST00000553488 PHF12Q96QT6 1004 aa12.72□□□□□ -0.37
ATXN3-219ENST00000553488 GOLGA3Q08378 1498 aa12.72□□□□□ -0.37
ATXN3-219ENST00000553488 CD109Q6YHK3 1445 aa12.71□□□□□ -0.37
ATXN3-219ENST00000553488 SPOCK2Q92563 424 aa12.69□□□□□ -0.38
ATXN3-219ENST00000553488 ARAP3Q8WWN8 1544 aa12.68□□□□□ -0.38
ATXN3-219ENST00000553488 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
ATXN3-219ENST00000553488 ADAMTSL3P82987 1691 aa12.67□□□□□ -0.38
ATXN3-219ENST00000553488 PRXQ9BXM0 1461 aa12.67□□□□□ -0.38
ATXN3-219ENST00000553488 ABCA9Q8IUA7 1624 aa12.67□□□□□ -0.38
ATXN3-219ENST00000553488 KIF12Q96FN5 646 aa12.66□□□□□ -0.38
ATXN3-219ENST00000553488 FRMPD1Q5SYB0 1578 aa12.64□□□□□ -0.39
ATXN3-219ENST00000553488 GALR2O43603 387 aaPredicted RBP12.64□□□□□ -0.39
ATXN3-219ENST00000553488 SAMD9Q5K651 1589 aa12.64□□□□□ -0.39
ATXN3-219ENST00000553488 BCORL1Q5H9F3 1711 aa12.62□□□□□ -0.39
ATXN3-219ENST00000553488 ATP10BO94823 1461 aa12.61□□□□□ -0.39
ATXN3-219ENST00000553488 KCNH8Q96L42 1107 aa12.61□□□□□ -0.39
ATXN3-219ENST00000553488 PTPRMP28827 1452 aa12.6□□□□□ -0.39
ATXN3-219ENST00000553488 RAPGEF6Q8TEU7 1601 aa12.6□□□□□ -0.39
ATXN3-219ENST00000553488 DCAF8Q5TAQ9 597 aa12.6□□□□□ -0.39
ATXN3-219ENST00000553488 MADDQ8WXG6 1647 aa12.59□□□□□ -0.39
ATXN3-219ENST00000553488 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
ATXN3-219ENST00000553488 GSE1Q14687 1217 aa12.59□□□□□ -0.39
ATXN3-219ENST00000553488 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
ATXN3-219ENST00000553488 MAP3K13O43283 966 aa12.58□□□□□ -0.4
ATXN3-219ENST00000553488 NEO1Q92859 1461 aa12.58□□□□□ -0.4
ATXN3-219ENST00000553488 ARHGEF40Q8TER5 1519 aa12.57□□□□□ -0.4
ATXN3-219ENST00000553488 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
ATXN3-219ENST00000553488 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
ATXN3-219ENST00000553488 PHLDB1Q86UU1 1377 aa12.56□□□□□ -0.4
ATXN3-219ENST00000553488 PCF11O94913 1555 aaKnown RBP12.56□□□□□ -0.4
ATXN3-219ENST00000553488 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
ATXN3-219ENST00000553488 RIMS1Q86UR5 1692 aaKnown RBP12.54□□□□□ -0.4
ATXN3-219ENST00000553488 SIGLEC1Q9BZZ2 1709 aa12.54□□□□□ -0.4
ATXN3-219ENST00000553488 NUP153P49790 1475 aaKnown RBP12.53□□□□□ -0.4
ATXN3-219ENST00000553488 ARID3CA6NKF2 412 aa12.53□□□□□ -0.4
ATXN3-219ENST00000553488 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
ATXN3-219ENST00000553488 FBXO41Q8TF61 875 aa12.52□□□□□ -0.41
ATXN3-219ENST00000553488 PYGBP11216 843 aa12.51□□□□□ -0.41
ATXN3-219ENST00000553488 RAPGEF3O95398 923 aa12.5□□□□□ -0.41
ATXN3-219ENST00000553488 ZMYM4Q5VZL5 1548 aa12.5□□□□□ -0.41
ATXN3-219ENST00000553488 CFAP74Q9C0B2 1584 aa12.5□□□□□ -0.41
ATXN3-219ENST00000553488 TTC37Q6PGP7 1564 aa12.49□□□□□ -0.41
ATXN3-219ENST00000553488 P3H3Q8IVL6 736 aa12.48□□□□□ -0.41
ATXN3-219ENST00000553488 TRPC6Q9Y210 931 aa12.48□□□□□ -0.41
ATXN3-219ENST00000553488 PCDHB13Q9Y5F0 798 aa12.48□□□□□ -0.41
ATXN3-219ENST00000553488 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
ATXN3-219ENST00000553488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.47□□□□□ -0.41
ATXN3-219ENST00000553488 FHOD3Q2V2M9 1422 aa12.46□□□□□ -0.41
ATXN3-219ENST00000553488 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
ATXN3-219ENST00000553488 DENND4BO75064 1496 aaPredicted RBP12.46□□□□□ -0.42
ATXN3-219ENST00000553488 FER1L4A9Z1Z3 1794 aa12.46□□□□□ -0.42
ATXN3-219ENST00000553488 ASTLQ6HA08 431 aaPredicted RBP12.45□□□□□ -0.42
ATXN3-219ENST00000553488 DCBLD2Q96PD2 775 aa12.45□□□□□ -0.42
ATXN3-219ENST00000553488 ZFYVE16Q7Z3T8 1539 aa12.44□□□□□ -0.42
ATXN3-219ENST00000553488 FANCAO15360 1455 aa12.44□□□□□ -0.42
ATXN3-219ENST00000553488 AKNAQ7Z591 1439 aa12.44□□□□□ -0.42
ATXN3-219ENST00000553488 EFCAB5A4FU69 1503 aa12.43□□□□□ -0.42
ATXN3-219ENST00000553488 HECW1Q76N89 1606 aa12.42□□□□□ -0.42
ATXN3-219ENST00000553488 ATMINO43313 823 aaPredicted RBP12.42□□□□□ -0.42
ATXN3-219ENST00000553488 TIE1P35590 1138 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms