RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 ADGRL1O94910 1474 aa29.23■■■□□ 2.27
CPSF2-202ENST00000553427 CDC42BPBQ9Y5S2 1711 aa29.23■■■□□ 2.27
CPSF2-202ENST00000553427 CDC42BPAQ5VT25 1732 aa29.22■■■□□ 2.27
CPSF2-202ENST00000553427 RICTORQ6R327 1708 aa29.21■■■□□ 2.27
CPSF2-202ENST00000553427 GPATCH8Q9UKJ3 1502 aaKnown RBP29.2■■■□□ 2.27
CPSF2-202ENST00000553427 RAPGEF3O95398 923 aa29.19■■■□□ 2.26
CPSF2-202ENST00000553427 ZMYM4Q5VZL5 1548 aa29.18■■■□□ 2.26
CPSF2-202ENST00000553427 POGZQ7Z3K3 1410 aa29.18■■■□□ 2.26
CPSF2-202ENST00000553427 SCAPERQ9BY12 1400 aa29.18■■■□□ 2.26
CPSF2-202ENST00000553427 LRRC9Q6ZRR7 1453 aa29.17■■■□□ 2.26
CPSF2-202ENST00000553427 CCNB3Q8WWL7 1395 aa29.15■■■□□ 2.26
CPSF2-202ENST00000553427 SUPT6HQ7KZ85 1726 aaKnown RBP29.14■■■□□ 2.25
CPSF2-202ENST00000553427 ABCC1P33527 1531 aa29.13■■■□□ 2.25
CPSF2-202ENST00000553427 NCOA2Q15596 1464 aa29.11■■■□□ 2.25
CPSF2-202ENST00000553427 MAGI2Q86UL8 1455 aa29.1■■■□□ 2.25
CPSF2-202ENST00000553427 ZNF518AQ6AHZ1 1483 aa29.1■■■□□ 2.25
CPSF2-202ENST00000553427 ITSN2Q9NZM3 1697 aa29.09■■■□□ 2.25
CPSF2-202ENST00000553427 ARHGEF40Q8TER5 1519 aa29.09■■■□□ 2.25
CPSF2-202ENST00000553427 KDM5CP41229 1560 aa29.06■■■□□ 2.24
CPSF2-202ENST00000553427 SAMD9LQ8IVG5 1584 aa29.06■■■□□ 2.24
CPSF2-202ENST00000553427 PLEKHH2Q8IVE3 1493 aa29.05■■■□□ 2.24
CPSF2-202ENST00000553427 CFDP1Q9UEE9 299 aaPredicted RBP29.05■■■□□ 2.24
CPSF2-202ENST00000553427 ARHGEF12Q9NZN5 1544 aa29.04■■■□□ 2.24
CPSF2-202ENST00000553427 KIAA1107Q9UPP5 1409 aa29.03■■■□□ 2.24
CPSF2-202ENST00000553427 APLP2Q06481 763 aa29.02■■■□□ 2.24
CPSF2-202ENST00000553427 KANK4Q5T7N3 995 aaPredicted RBP29.02■■■□□ 2.24
CPSF2-202ENST00000553427 ZFYVE16Q7Z3T8 1539 aa29.02■■■□□ 2.24
CPSF2-202ENST00000553427 TRAPPC8Q9Y2L5 1435 aa28.98■■■□□ 2.23
CPSF2-202ENST00000553427 SYCP2Q9BX26 1530 aa28.98■■■□□ 2.23
CPSF2-202ENST00000553427 YEATS2Q9ULM3 1422 aa28.96■■■□□ 2.23
CPSF2-202ENST00000553427 MLH3Q9UHC1 1453 aa28.96■■■□□ 2.23
CPSF2-202ENST00000553427 HECW2Q9P2P5 1572 aa28.96■■■□□ 2.23
CPSF2-202ENST00000553427 AFAP1Q8N556 730 aa28.95■■■□□ 2.22
CPSF2-202ENST00000553427 ZNF777Q9ULD5 760 aaPredicted RBP28.95■■■□□ 2.22
CPSF2-202ENST00000553427 KDM4FA0A1W2PPD8 638 aa28.93■■■□□ 2.22
CPSF2-202ENST00000553427 MYOM3Q5VTT5 1437 aa28.89■■■□□ 2.22
CPSF2-202ENST00000553427 MBD5Q9P267 1494 aa28.89■■■□□ 2.22
CPSF2-202ENST00000553427 MIA2Q96PC5 1412 aa28.88■■■□□ 2.21
CPSF2-202ENST00000553427 ATP10AO60312 1499 aa28.88■■■□□ 2.21
CPSF2-202ENST00000553427 CAMSAP2Q08AD1 1489 aa28.88■■■□□ 2.21
CPSF2-202ENST00000553427 ZNF644Q9H582 1327 aaPredicted RBP28.87■■■□□ 2.21
CPSF2-202ENST00000553427 C9orf84Q5VXU9 1444 aa28.86■■■□□ 2.21
CPSF2-202ENST00000553427 HNRNPMP52272 730 aaKnown RBP eCLIP28.86■■■□□ 2.21
CPSF2-202ENST00000553427 REREQ9P2R6 1566 aa28.85■■■□□ 2.21
CPSF2-202ENST00000553427 DIP2CQ9Y2E4 1556 aa28.85■■■□□ 2.21
CPSF2-202ENST00000553427 ABCA6Q8N139 1617 aa28.83■■■□□ 2.21
CPSF2-202ENST00000553427 KIDINS220Q9ULH0 1771 aa28.83■■■□□ 2.21
CPSF2-202ENST00000553427 INO80Q9ULG1 1556 aaPredicted RBP28.81■■■□□ 2.2
CPSF2-202ENST00000553427 SPAG9O60271 1321 aaKnown RBP28.8■■■□□ 2.2
CPSF2-202ENST00000553427 AEBP2Q6ZN18 517 aaPredicted RBP28.8■■■□□ 2.2
CPSF2-202ENST00000553427 BCORL1Q5H9F3 1711 aa28.8■■■□□ 2.2
CPSF2-202ENST00000553427 ARHGEF5Q12774 1597 aa28.79■■■□□ 2.2
CPSF2-202ENST00000553427 SIGLEC1Q9BZZ2 1709 aa28.79■■■□□ 2.2
CPSF2-202ENST00000553427 ATP7AQ04656 1500 aa28.79■■■□□ 2.2
CPSF2-202ENST00000553427 CCDC141Q6ZP82 1450 aa28.78■■■□□ 2.2
CPSF2-202ENST00000553427 ADAMTSL3P82987 1691 aa28.78■■■□□ 2.2
CPSF2-202ENST00000553427 RSPH4AQ5TD94 716 aa28.78■■■□□ 2.2
CPSF2-202ENST00000553427 ARID4BQ4LE39 1312 aaPredicted RBP28.75■■■□□ 2.19
CPSF2-202ENST00000553427 RTEL1-TNFRSF6BF6WH68 1400 aa28.75■■■□□ 2.19
CPSF2-202ENST00000553427 MYT1LQ9UL68 1186 aa28.74■■■□□ 2.19
CPSF2-202ENST00000553427 AGLP35573 1532 aa28.74■■■□□ 2.19
CPSF2-202ENST00000553427 FGD6Q6ZV73 1430 aa28.72■■■□□ 2.19
CPSF2-202ENST00000553427 TCOF1Q13428 1488 aaKnown RBP28.69■■■□□ 2.18
CPSF2-202ENST00000553427 PTPN23Q9H3S7 1636 aa28.69■■■□□ 2.18
CPSF2-202ENST00000553427 PLXNC1O60486 1568 aa28.67■■■□□ 2.18
CPSF2-202ENST00000553427 MADDQ8WXG6 1647 aa28.66■■■□□ 2.18
CPSF2-202ENST00000553427 MAST1Q9Y2H9 1570 aa28.65■■■□□ 2.18
CPSF2-202ENST00000553427 ADGBQ8N7X0 1667 aa28.64■■■□□ 2.17
CPSF2-202ENST00000553427 A2MP01023 1474 aa28.63■■■□□ 2.17
CPSF2-202ENST00000553427 PTPRMP28827 1452 aa28.6■■■□□ 2.17
CPSF2-202ENST00000553427 TSPY4P0CV99 314 aa28.6■■■□□ 2.17
CPSF2-202ENST00000553427 TSPY10P0CW01 314 aa28.6■■■□□ 2.17
CPSF2-202ENST00000553427 SHANK2Q9UPX8 1470 aa28.59■■■□□ 2.17
CPSF2-202ENST00000553427 DNMT1P26358 1616 aaKnown RBP28.56■■■□□ 2.16
CPSF2-202ENST00000553427 FER1L4A9Z1Z3 1794 aa28.55■■■□□ 2.16
CPSF2-202ENST00000553427 ABCC5O15440 1437 aa28.55■■■□□ 2.16
CPSF2-202ENST00000553427 CROCC2H7BZ55 1655 aa28.54■■■□□ 2.16
CPSF2-202ENST00000553427 RIMS1Q86UR5 1692 aaKnown RBP28.54■■■□□ 2.16
CPSF2-202ENST00000553427 DHX29Q7Z478 1369 aaKnown RBP28.54■■■□□ 2.16
CPSF2-202ENST00000553427 MLECQ14165 292 aa28.54■■■□□ 2.16
CPSF2-202ENST00000553427 DAPK1P53355 1430 aa28.53■■■□□ 2.16
CPSF2-202ENST00000553427 CNTLNQ9NXG0 1405 aa28.45■■■□□ 2.15
CPSF2-202ENST00000553427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.43■■■□□ 2.14
CPSF2-202ENST00000553427 PPP6R1Q9UPN7 881 aa28.41■■■□□ 2.14
CPSF2-202ENST00000553427 DUOX2Q9NRD8 1548 aa28.41■■■□□ 2.14
CPSF2-202ENST00000553427 FAM135AQ9P2D6 1515 aa28.4■■■□□ 2.14
CPSF2-202ENST00000553427 FAM50AQ14320 339 aaKnown RBP28.4■■■□□ 2.14
CPSF2-202ENST00000553427 PPARGC1BQ86YN6 1023 aaKnown RBP28.4■■■□□ 2.14
CPSF2-202ENST00000553427 ADGRL2O95490 1459 aa28.4■■■□□ 2.14
CPSF2-202ENST00000553427 EIF2AK4Q9P2K8 1649 aaKnown RBP28.4■■■□□ 2.14
CPSF2-202ENST00000553427 KIF15Q9NS87 1388 aa28.39■■■□□ 2.14
CPSF2-202ENST00000553427 MROH2AA6NES4 1674 aa28.38■■■□□ 2.13
CPSF2-202ENST00000553427 ANKRD30AQ9BXX3 1397 aa28.37■■■□□ 2.13
CPSF2-202ENST00000553427 ESF1Q9H501 851 aaKnown RBP28.36■■■□□ 2.13
CPSF2-202ENST00000553427 RNF17Q9BXT8 1623 aaKnown RBP28.36■■■□□ 2.13
CPSF2-202ENST00000553427 ERBINQ96RT1 1412 aa28.35■■■□□ 2.13
CPSF2-202ENST00000553427 RRBP1Q9P2E9 1410 aaKnown RBP28.35■■■□□ 2.13
CPSF2-202ENST00000553427 NCOA1Q15788 1441 aa28.35■■■□□ 2.13
CPSF2-202ENST00000553427 KIF3BO15066 747 aa28.34■■■□□ 2.13
CPSF2-202ENST00000553427 GGT6Q6P531 493 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms