RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 GPATCH8Q9UKJ3 1502 aaKnown RBP16.13■□□□□ 0.17
CALCOCO1-222ENST00000553154 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
CALCOCO1-222ENST00000553154 CDC42BPAQ5VT25 1732 aa16.11■□□□□ 0.17
CALCOCO1-222ENST00000553154 CDC42BPBQ9Y5S2 1711 aa16.11■□□□□ 0.17
CALCOCO1-222ENST00000553154 ZMYM4Q5VZL5 1548 aa16.09■□□□□ 0.17
CALCOCO1-222ENST00000553154 RICTORQ6R327 1708 aa16.09■□□□□ 0.17
CALCOCO1-222ENST00000553154 ARHGAP5Q13017 1502 aa16.09■□□□□ 0.17
CALCOCO1-222ENST00000553154 POGZQ7Z3K3 1410 aa16.08■□□□□ 0.16
CALCOCO1-222ENST00000553154 DENND4BO75064 1496 aaPredicted RBP16.08■□□□□ 0.16
CALCOCO1-222ENST00000553154 ADGRL1O94910 1474 aa16.08■□□□□ 0.16
CALCOCO1-222ENST00000553154 NCOA2Q15596 1464 aa16.08■□□□□ 0.16
CALCOCO1-222ENST00000553154 ABCC1P33527 1531 aa16.08■□□□□ 0.16
CALCOCO1-222ENST00000553154 ARHGEF12Q9NZN5 1544 aa16.07■□□□□ 0.16
CALCOCO1-222ENST00000553154 SAMD9LQ8IVG5 1584 aa16.06■□□□□ 0.16
CALCOCO1-222ENST00000553154 KANK4Q5T7N3 995 aaPredicted RBP16.06■□□□□ 0.16
CALCOCO1-222ENST00000553154 EFCAB2Q5VUJ9 269 aa16.05■□□□□ 0.16
CALCOCO1-222ENST00000553154 SUPT6HQ7KZ85 1726 aaKnown RBP16.05■□□□□ 0.16
CALCOCO1-222ENST00000553154 KDM5CP41229 1560 aa16.04■□□□□ 0.16
CALCOCO1-222ENST00000553154 SCAPERQ9BY12 1400 aa16.04■□□□□ 0.16
CALCOCO1-222ENST00000553154 RAPGEF3O95398 923 aa16.03■□□□□ 0.16
CALCOCO1-222ENST00000553154 CCNB3Q8WWL7 1395 aa16.02■□□□□ 0.16
CALCOCO1-222ENST00000553154 ARHGEF40Q8TER5 1519 aa16.02■□□□□ 0.15
CALCOCO1-222ENST00000553154 ITSN2Q9NZM3 1697 aa16.01■□□□□ 0.15
CALCOCO1-222ENST00000553154 KIAA1107Q9UPP5 1409 aa16.01■□□□□ 0.15
CALCOCO1-222ENST00000553154 TRAPPC8Q9Y2L5 1435 aa16■□□□□ 0.15
CALCOCO1-222ENST00000553154 ZNF518AQ6AHZ1 1483 aa15.99■□□□□ 0.15
CALCOCO1-222ENST00000553154 MAGI2Q86UL8 1455 aa15.99■□□□□ 0.15
CALCOCO1-222ENST00000553154 SYCP2Q9BX26 1530 aa15.99■□□□□ 0.15
CALCOCO1-222ENST00000553154 MBD5Q9P267 1494 aa15.98■□□□□ 0.15
CALCOCO1-222ENST00000553154 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
CALCOCO1-222ENST00000553154 YEATS2Q9ULM3 1422 aa15.97■□□□□ 0.15
CALCOCO1-222ENST00000553154 ZFYVE16Q7Z3T8 1539 aa15.96■□□□□ 0.15
CALCOCO1-222ENST00000553154 MLH3Q9UHC1 1453 aa15.96■□□□□ 0.14
CALCOCO1-222ENST00000553154 MYOM3Q5VTT5 1437 aa15.95■□□□□ 0.14
CALCOCO1-222ENST00000553154 CFDP1Q9UEE9 299 aaPredicted RBP15.95■□□□□ 0.14
CALCOCO1-222ENST00000553154 CAMSAP2Q08AD1 1489 aa15.94■□□□□ 0.14
CALCOCO1-222ENST00000553154 HECW2Q9P2P5 1572 aa15.94■□□□□ 0.14
CALCOCO1-222ENST00000553154 SIGLEC1Q9BZZ2 1709 aa15.94■□□□□ 0.14
CALCOCO1-222ENST00000553154 MIA2Q96PC5 1412 aa15.94■□□□□ 0.14
CALCOCO1-222ENST00000553154 ZNF644Q9H582 1327 aaPredicted RBP15.94■□□□□ 0.14
CALCOCO1-222ENST00000553154 AFAP1Q8N556 730 aa15.93■□□□□ 0.14
CALCOCO1-222ENST00000553154 INO80Q9ULG1 1556 aaPredicted RBP15.92■□□□□ 0.14
CALCOCO1-222ENST00000553154 REREQ9P2R6 1566 aa15.92■□□□□ 0.14
CALCOCO1-222ENST00000553154 DIP2CQ9Y2E4 1556 aa15.92■□□□□ 0.14
CALCOCO1-222ENST00000553154 ABCA6Q8N139 1617 aa15.9■□□□□ 0.14
CALCOCO1-222ENST00000553154 KIDINS220Q9ULH0 1771 aa15.9■□□□□ 0.14
CALCOCO1-222ENST00000553154 ARHGEF5Q12774 1597 aa15.9■□□□□ 0.14
CALCOCO1-222ENST00000553154 TCOF1Q13428 1488 aaKnown RBP15.89■□□□□ 0.13
CALCOCO1-222ENST00000553154 FGD6Q6ZV73 1430 aa15.87■□□□□ 0.13
CALCOCO1-222ENST00000553154 ATP10AO60312 1499 aa15.87■□□□□ 0.13
CALCOCO1-222ENST00000553154 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.13
CALCOCO1-222ENST00000553154 APLP2Q06481 763 aa15.87■□□□□ 0.13
CALCOCO1-222ENST00000553154 FBXO41Q8TF61 875 aa15.87■□□□□ 0.13
CALCOCO1-222ENST00000553154 ZNF777Q9ULD5 760 aaPredicted RBP15.87■□□□□ 0.13
CALCOCO1-222ENST00000553154 C9orf84Q5VXU9 1444 aa15.86■□□□□ 0.13
CALCOCO1-222ENST00000553154 CCDC141Q6ZP82 1450 aa15.86■□□□□ 0.13
CALCOCO1-222ENST00000553154 ATP7AQ04656 1500 aa15.86■□□□□ 0.13
CALCOCO1-222ENST00000553154 AGLP35573 1532 aa15.84■□□□□ 0.13
CALCOCO1-222ENST00000553154 PLXNC1O60486 1568 aa15.84■□□□□ 0.13
CALCOCO1-222ENST00000553154 ADAMTSL3P82987 1691 aa15.84■□□□□ 0.13
CALCOCO1-222ENST00000553154 RTEL1-TNFRSF6BF6WH68 1400 aa15.84■□□□□ 0.13
CALCOCO1-222ENST00000553154 MAST1Q9Y2H9 1570 aa15.83■□□□□ 0.13
CALCOCO1-222ENST00000553154 PTPN23Q9H3S7 1636 aa15.83■□□□□ 0.13
CALCOCO1-222ENST00000553154 BCORL1Q5H9F3 1711 aa15.82■□□□□ 0.12
CALCOCO1-222ENST00000553154 SPAG9O60271 1321 aaKnown RBP15.81■□□□□ 0.12
CALCOCO1-222ENST00000553154 SHANK2Q9UPX8 1470 aa15.79■□□□□ 0.12
CALCOCO1-222ENST00000553154 ABCC5O15440 1437 aa15.79■□□□□ 0.12
CALCOCO1-222ENST00000553154 RSPH4AQ5TD94 716 aa15.79■□□□□ 0.12
CALCOCO1-222ENST00000553154 DNMT1P26358 1616 aaKnown RBP15.79■□□□□ 0.12
CALCOCO1-222ENST00000553154 CROCC2H7BZ55 1655 aa15.77■□□□□ 0.12
CALCOCO1-222ENST00000553154 A2MP01023 1474 aa15.77■□□□□ 0.11
CALCOCO1-222ENST00000553154 ADGBQ8N7X0 1667 aa15.76■□□□□ 0.11
CALCOCO1-222ENST00000553154 DAPK1P53355 1430 aa15.76■□□□□ 0.11
CALCOCO1-222ENST00000553154 MADDQ8WXG6 1647 aa15.76■□□□□ 0.11
CALCOCO1-222ENST00000553154 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.73■□□□□ 0.11
CALCOCO1-222ENST00000553154 RRBP1Q9P2E9 1410 aaKnown RBP15.72■□□□□ 0.11
CALCOCO1-222ENST00000553154 DHX29Q7Z478 1369 aaKnown RBP15.72■□□□□ 0.11
CALCOCO1-222ENST00000553154 ADGRL2O95490 1459 aa15.71■□□□□ 0.1
CALCOCO1-222ENST00000553154 PTPRMP28827 1452 aa15.71■□□□□ 0.1
CALCOCO1-222ENST00000553154 LMTK3Q96Q04 1460 aa15.7■□□□□ 0.1
CALCOCO1-222ENST00000553154 PTPRKQ15262 1439 aa15.69■□□□□ 0.1
CALCOCO1-222ENST00000553154 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
CALCOCO1-222ENST00000553154 ARID4BQ4LE39 1312 aaPredicted RBP15.68■□□□□ 0.1
CALCOCO1-222ENST00000553154 TSPY4P0CV99 314 aa15.66■□□□□ 0.1
CALCOCO1-222ENST00000553154 TSPY10P0CW01 314 aa15.66■□□□□ 0.1
CALCOCO1-222ENST00000553154 FER1L4A9Z1Z3 1794 aa15.66■□□□□ 0.1
CALCOCO1-222ENST00000553154 NCOA1Q15788 1441 aa15.66■□□□□ 0.1
CALCOCO1-222ENST00000553154 RIMS1Q86UR5 1692 aaKnown RBP15.66■□□□□ 0.1
CALCOCO1-222ENST00000553154 MROH1Q8NDA8 1641 aa15.65■□□□□ 0.1
CALCOCO1-222ENST00000553154 RNF17Q9BXT8 1623 aaKnown RBP15.65■□□□□ 0.1
CALCOCO1-222ENST00000553154 EIF2AK4Q9P2K8 1649 aaKnown RBP15.65■□□□□ 0.1
CALCOCO1-222ENST00000553154 DUOX2Q9NRD8 1548 aa15.65■□□□□ 0.1
CALCOCO1-222ENST00000553154 FAM135AQ9P2D6 1515 aa15.64■□□□□ 0.09
CALCOCO1-222ENST00000553154 MYT1LQ9UL68 1186 aa15.64■□□□□ 0.09
CALCOCO1-222ENST00000553154 KIF15Q9NS87 1388 aa15.63■□□□□ 0.09
CALCOCO1-222ENST00000553154 ERBINQ96RT1 1412 aa15.63■□□□□ 0.09
CALCOCO1-222ENST00000553154 CNTLNQ9NXG0 1405 aa15.61■□□□□ 0.09
CALCOCO1-222ENST00000553154 MLECQ14165 292 aa15.61■□□□□ 0.09
CALCOCO1-222ENST00000553154 ROCK1Q13464 1354 aa15.61■□□□□ 0.09
CALCOCO1-222ENST00000553154 MROH2AA6NES4 1674 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms