RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 PCF11O94913 1555 aaKnown RBP17.23■□□□□ 0.35
DDX23-217ENST00000553065 POGZQ7Z3K3 1410 aa17.22■□□□□ 0.35
DDX23-217ENST00000553065 BCORL1Q5H9F3 1711 aa17.22■□□□□ 0.35
DDX23-217ENST00000553065 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.34
DDX23-217ENST00000553065 CFAP74Q9C0B2 1584 aa17.2■□□□□ 0.34
DDX23-217ENST00000553065 ARHGEF12Q9NZN5 1544 aa17.2■□□□□ 0.34
DDX23-217ENST00000553065 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
DDX23-217ENST00000553065 CDC42BPBQ9Y5S2 1711 aa17.18■□□□□ 0.34
DDX23-217ENST00000553065 MADDQ8WXG6 1647 aa17.18■□□□□ 0.34
DDX23-217ENST00000553065 ZFYVE16Q7Z3T8 1539 aa17.17■□□□□ 0.34
DDX23-217ENST00000553065 MYO5CQ9NQX4 1742 aa17.17■□□□□ 0.34
DDX23-217ENST00000553065 TRAPPC8Q9Y2L5 1435 aa17.15■□□□□ 0.34
DDX23-217ENST00000553065 LOC105371045A0A1W2PR82 267 aa17.15■□□□□ 0.34
DDX23-217ENST00000553065 MLECQ14165 292 aa17.15■□□□□ 0.34
DDX23-217ENST00000553065 ATP10AO60312 1499 aa17.15■□□□□ 0.34
DDX23-217ENST00000553065 CCDC18Q5T9S5 1454 aa17.15■□□□□ 0.34
DDX23-217ENST00000553065 FYCO1Q9BQS8 1478 aa17.15■□□□□ 0.34
DDX23-217ENST00000553065 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
DDX23-217ENST00000553065 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
DDX23-217ENST00000553065 KDM5CP41229 1560 aa17.11■□□□□ 0.33
DDX23-217ENST00000553065 ILDR1Q86SU0 546 aaPredicted RBP17.11■□□□□ 0.33
DDX23-217ENST00000553065 ZNF518AQ6AHZ1 1483 aa17.1■□□□□ 0.33
DDX23-217ENST00000553065 CDC42BPAQ5VT25 1732 aa17.08■□□□□ 0.32
DDX23-217ENST00000553065 RIMS1Q86UR5 1692 aaKnown RBP17.08■□□□□ 0.32
DDX23-217ENST00000553065 PREX2Q70Z35 1606 aa17.08■□□□□ 0.32
DDX23-217ENST00000553065 MLH3Q9UHC1 1453 aa17.08■□□□□ 0.32
DDX23-217ENST00000553065 CEBPAP49715 358 aaPredicted RBP17.08■□□□□ 0.32
DDX23-217ENST00000553065 HNRNPMP52272 730 aaKnown RBP eCLIP17.08■□□□□ 0.32
DDX23-217ENST00000553065 LMTK3Q96Q04 1460 aa17.07■□□□□ 0.32
DDX23-217ENST00000553065 C9orf84Q5VXU9 1444 aa17.07■□□□□ 0.32
DDX23-217ENST00000553065 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
DDX23-217ENST00000553065 ABCC1P33527 1531 aa17.06■□□□□ 0.32
DDX23-217ENST00000553065 CEP162Q5TB80 1403 aa17.06■□□□□ 0.32
DDX23-217ENST00000553065 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
DDX23-217ENST00000553065 HSPA2P54652 639 aa17.05■□□□□ 0.32
DDX23-217ENST00000553065 DIP2CQ9Y2E4 1556 aa17.05■□□□□ 0.32
DDX23-217ENST00000553065 ZNF644Q9H582 1327 aaPredicted RBP17.04■□□□□ 0.32
DDX23-217ENST00000553065 SAMD9LQ8IVG5 1584 aa17.03■□□□□ 0.32
DDX23-217ENST00000553065 ABCA6Q8N139 1617 aa17.02■□□□□ 0.31
DDX23-217ENST00000553065 ITSN2Q9NZM3 1697 aa17.01■□□□□ 0.31
DDX23-217ENST00000553065 CFDP1Q9UEE9 299 aaPredicted RBP17.01■□□□□ 0.31
DDX23-217ENST00000553065 KIDINS220Q9ULH0 1771 aa17.01■□□□□ 0.31
DDX23-217ENST00000553065 MYT1LQ9UL68 1186 aa17■□□□□ 0.31
DDX23-217ENST00000553065 REREQ9P2R6 1566 aa16.99■□□□□ 0.31
DDX23-217ENST00000553065 MTUS2Q5JR59 1369 aa16.99■□□□□ 0.31
DDX23-217ENST00000553065 KIAA1107Q9UPP5 1409 aa16.98■□□□□ 0.31
DDX23-217ENST00000553065 CCNB3Q8WWL7 1395 aa16.98■□□□□ 0.31
DDX23-217ENST00000553065 FER1L4A9Z1Z3 1794 aa16.97■□□□□ 0.31
DDX23-217ENST00000553065 AGLP35573 1532 aa16.96■□□□□ 0.31
DDX23-217ENST00000553065 SYCP2Q9BX26 1530 aa16.96■□□□□ 0.31
DDX23-217ENST00000553065 MBD5Q9P267 1494 aa16.96■□□□□ 0.31
DDX23-217ENST00000553065 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.3
DDX23-217ENST00000553065 TIAM1Q13009 1591 aa16.94■□□□□ 0.3
DDX23-217ENST00000553065 KANK4Q5T7N3 995 aaPredicted RBP16.93■□□□□ 0.3
DDX23-217ENST00000553065 EHBP1L1Q8N3D4 1523 aa16.9■□□□□ 0.3
DDX23-217ENST00000553065 NCOA2Q15596 1464 aa16.89■□□□□ 0.29
DDX23-217ENST00000553065 PLEKHH2Q8IVE3 1493 aa16.88■□□□□ 0.29
DDX23-217ENST00000553065 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
DDX23-217ENST00000553065 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
DDX23-217ENST00000553065 INO80Q9ULG1 1556 aaPredicted RBP16.86■□□□□ 0.29
DDX23-217ENST00000553065 SETD1BQ9UPS6 1966 aaKnown RBP16.86■□□□□ 0.29
DDX23-217ENST00000553065 C3P01024 1663 aa16.85■□□□□ 0.29
DDX23-217ENST00000553065 ZMYM3Q14202 1370 aa16.85■□□□□ 0.29
DDX23-217ENST00000553065 A2MP01023 1474 aa16.85■□□□□ 0.29
DDX23-217ENST00000553065 PLXNC1O60486 1568 aa16.85■□□□□ 0.29
DDX23-217ENST00000553065 LRRC9Q6ZRR7 1453 aa16.84■□□□□ 0.29
DDX23-217ENST00000553065 RTEL1-TNFRSF6BF6WH68 1400 aa16.83■□□□□ 0.28
DDX23-217ENST00000553065 SUPT6HQ7KZ85 1726 aaKnown RBP16.83■□□□□ 0.28
DDX23-217ENST00000553065 FBXO41Q8TF61 875 aa16.83■□□□□ 0.28
DDX23-217ENST00000553065 GGT6Q6P531 493 aa16.82■□□□□ 0.28
DDX23-217ENST00000553065 STRCQ7RTU9 1775 aa16.82■□□□□ 0.28
DDX23-217ENST00000553065 PREX1Q8TCU6 1659 aa16.81■□□□□ 0.28
DDX23-217ENST00000553065 DHX29Q7Z478 1369 aaKnown RBP16.81■□□□□ 0.28
DDX23-217ENST00000553065 CNTLNQ9NXG0 1405 aa16.79■□□□□ 0.28
DDX23-217ENST00000553065 ESF1Q9H501 851 aaKnown RBP16.79■□□□□ 0.28
DDX23-217ENST00000553065 CAMSAP2Q08AD1 1489 aa16.79■□□□□ 0.28
DDX23-217ENST00000553065 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
DDX23-217ENST00000553065 RSPH4AQ5TD94 716 aa16.78■□□□□ 0.28
DDX23-217ENST00000553065 MAP3K1Q13233 1512 aa16.77■□□□□ 0.28
DDX23-217ENST00000553065 CERKQ8TCT0 537 aa16.76■□□□□ 0.27
DDX23-217ENST00000553065 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
DDX23-217ENST00000553065 PTPRKQ15262 1439 aa16.76■□□□□ 0.27
DDX23-217ENST00000553065 CCDC141Q6ZP82 1450 aa16.75■□□□□ 0.27
DDX23-217ENST00000553065 KIF3BO15066 747 aa16.75■□□□□ 0.27
DDX23-217ENST00000553065 NPATQ14207 1427 aa16.74■□□□□ 0.27
DDX23-217ENST00000553065 FBXO31Q5XUX0 539 aaPredicted RBP16.74■□□□□ 0.27
DDX23-217ENST00000553065 MROH2AA6NES4 1674 aa16.73■□□□□ 0.27
DDX23-217ENST00000553065 CLTCQ00610 1675 aaKnown RBP16.73■□□□□ 0.27
DDX23-217ENST00000553065 ADGBQ8N7X0 1667 aa16.73■□□□□ 0.27
DDX23-217ENST00000553065 ARHGEF5Q12774 1597 aa16.72■□□□□ 0.27
DDX23-217ENST00000553065 TSPY4P0CV99 314 aa16.7■□□□□ 0.26
DDX23-217ENST00000553065 TSPY10P0CW01 314 aa16.7■□□□□ 0.26
DDX23-217ENST00000553065 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
DDX23-217ENST00000553065 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
DDX23-217ENST00000553065 NCKAP5LQ9HCH0 1330 aa16.7■□□□□ 0.26
DDX23-217ENST00000553065 PTPRTO14522 1441 aa16.69■□□□□ 0.26
DDX23-217ENST00000553065 MYOM3Q5VTT5 1437 aa16.69■□□□□ 0.26
DDX23-217ENST00000553065 MIA2Q96PC5 1412 aa16.68■□□□□ 0.26
DDX23-217ENST00000553065 CAMSAP1Q5T5Y3 1602 aa16.65■□□□□ 0.26
DDX23-217ENST00000553065 ABCC5O15440 1437 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms