RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 AKT1S1Q96B36 256 aa14.93□□□□□ -0.02
UBE2N-206ENST00000552442 WDR7Q9Y4E6 1490 aa14.93□□□□□ -0.02
UBE2N-206ENST00000552442 KDM6BO15054 1643 aa14.92□□□□□ -0.02
UBE2N-206ENST00000552442 FHOD3Q2V2M9 1422 aa14.92□□□□□ -0.02
UBE2N-206ENST00000552442 UBTFP17480 764 aaKnown RBP14.9□□□□□ -0.02
UBE2N-206ENST00000552442 CFAP43Q8NDM7 1665 aa14.89□□□□□ -0.03
UBE2N-206ENST00000552442 ATP10BO94823 1461 aa14.87□□□□□ -0.03
UBE2N-206ENST00000552442 ARID3CA6NKF2 412 aa14.85□□□□□ -0.03
UBE2N-206ENST00000552442 NUP153P49790 1475 aaKnown RBP14.84□□□□□ -0.03
UBE2N-206ENST00000552442 PROM2Q8N271 834 aa14.84□□□□□ -0.03
UBE2N-206ENST00000552442 TEX14Q8IWB6 1497 aa14.83□□□□□ -0.03
UBE2N-206ENST00000552442 ARHGAP35Q9NRY4 1499 aa14.82□□□□□ -0.04
UBE2N-206ENST00000552442 KCNH8Q96L42 1107 aa14.81□□□□□ -0.04
UBE2N-206ENST00000552442 ABCA9Q8IUA7 1624 aa14.8□□□□□ -0.04
UBE2N-206ENST00000552442 HECW1Q76N89 1606 aa14.79□□□□□ -0.04
UBE2N-206ENST00000552442 MAGI3Q5TCQ9 1506 aa14.78□□□□□ -0.04
UBE2N-206ENST00000552442 FMN1Q68DA7 1419 aa14.78□□□□□ -0.04
UBE2N-206ENST00000552442 CD109Q6YHK3 1445 aa14.78□□□□□ -0.04
UBE2N-206ENST00000552442 CDK13Q14004 1512 aaKnown RBP14.75□□□□□ -0.05
UBE2N-206ENST00000552442 LRRIQ1Q96JM4 1722 aa14.75□□□□□ -0.05
UBE2N-206ENST00000552442 REM2Q8IYK8 340 aaPredicted RBP14.74□□□□□ -0.05
UBE2N-206ENST00000552442 COL17A1Q9UMD9 1497 aaPredicted RBP14.72□□□□□ -0.05
UBE2N-206ENST00000552442 PCF11O94913 1555 aaKnown RBP14.71□□□□□ -0.05
UBE2N-206ENST00000552442 PLEKHD1A6NEE1 506 aa14.7□□□□□ -0.06
UBE2N-206ENST00000552442 SPDYE1Q8NFV5 336 aaPredicted RBP14.69□□□□□ -0.06
UBE2N-206ENST00000552442 ATP1B4Q9UN42 357 aaPredicted RBP14.69□□□□□ -0.06
UBE2N-206ENST00000552442 TTC37Q6PGP7 1564 aa14.68□□□□□ -0.06
UBE2N-206ENST00000552442 CLIP1P30622 1438 aa14.68□□□□□ -0.06
UBE2N-206ENST00000552442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■■□□□ 12.3
UBE2N-206ENST00000552442 CFAP74Q9C0B2 1584 aa14.67□□□□□ -0.06
UBE2N-206ENST00000552442 STAG3Q9UJ98 1225 aa14.66□□□□□ -0.06
UBE2N-206ENST00000552442 MYO5CQ9NQX4 1742 aa14.66□□□□□ -0.06
UBE2N-206ENST00000552442 ARAP3Q8WWN8 1544 aa14.66□□□□□ -0.06
UBE2N-206ENST00000552442 NEO1Q92859 1461 aa14.65□□□□□ -0.06
UBE2N-206ENST00000552442 FBXO3Q9UK99 471 aa14.65□□□□□ -0.06
UBE2N-206ENST00000552442 CASKIN1Q8WXD9 1431 aa14.65□□□□□ -0.06
UBE2N-206ENST00000552442 KIF14Q15058 1648 aa14.64□□□□□ -0.07
UBE2N-206ENST00000552442 CCDC18Q5T9S5 1454 aa14.63□□□□□ -0.07
UBE2N-206ENST00000552442 FYCO1Q9BQS8 1478 aa14.63□□□□□ -0.07
UBE2N-206ENST00000552442 PHLDB1Q86UU1 1377 aa14.63□□□□□ -0.07
UBE2N-206ENST00000552442 CDK11AQ9UQ88 783 aaPredicted RBP14.61□□□□□ -0.07
UBE2N-206ENST00000552442 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
UBE2N-206ENST00000552442 TROQ12816 1431 aaPredicted RBP14.6□□□□□ -0.07
UBE2N-206ENST00000552442 RICTORQ6R327 1708 aa14.6□□□□□ -0.07
UBE2N-206ENST00000552442 FANCAO15360 1455 aa14.59□□□□□ -0.07
UBE2N-206ENST00000552442 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
UBE2N-206ENST00000552442 FRMPD1Q5SYB0 1578 aa14.59□□□□□ -0.07
UBE2N-206ENST00000552442 CEP162Q5TB80 1403 aa14.58□□□□□ -0.07
UBE2N-206ENST00000552442 AKNAQ7Z591 1439 aa14.56□□□□□ -0.08
UBE2N-206ENST00000552442 ADGRL1O94910 1474 aa14.56□□□□□ -0.08
UBE2N-206ENST00000552442 CDC42BPBQ9Y5S2 1711 aa14.55□□□□□ -0.08
UBE2N-206ENST00000552442 PLCH2O75038 1416 aa14.55□□□□□ -0.08
UBE2N-206ENST00000552442 DENND4BO75064 1496 aaPredicted RBP14.54□□□□□ -0.08
UBE2N-206ENST00000552442 PREX2Q70Z35 1606 aa14.54□□□□□ -0.08
UBE2N-206ENST00000552442 CDC42BPAQ5VT25 1732 aa14.54□□□□□ -0.08
UBE2N-206ENST00000552442 KDM4FA0A1W2PPD8 638 aa14.53□□□□□ -0.08
UBE2N-206ENST00000552442 RAPGEF3O95398 923 aa14.53□□□□□ -0.08
UBE2N-206ENST00000552442 ARHGAP5Q13017 1502 aa14.52□□□□□ -0.08
UBE2N-206ENST00000552442 ARHGEF40Q8TER5 1519 aa14.51□□□□□ -0.09
UBE2N-206ENST00000552442 ZMYM4Q5VZL5 1548 aa14.51□□□□□ -0.09
UBE2N-206ENST00000552442 LOC105371045A0A1W2PR82 267 aa14.49□□□□□ -0.09
UBE2N-206ENST00000552442 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
UBE2N-206ENST00000552442 EFCAB2Q5VUJ9 269 aa14.48□□□□□ -0.09
UBE2N-206ENST00000552442 SCAPERQ9BY12 1400 aa14.48□□□□□ -0.09
UBE2N-206ENST00000552442 ITSN2Q9NZM3 1697 aa14.47□□□□□ -0.09
UBE2N-206ENST00000552442 POGZQ7Z3K3 1410 aa14.47□□□□□ -0.09
UBE2N-206ENST00000552442 ZFYVE16Q7Z3T8 1539 aa14.46□□□□□ -0.09
UBE2N-206ENST00000552442 CHRDL2Q6WN34 429 aa14.46□□□□□ -0.09
UBE2N-206ENST00000552442 EHBP1L1Q8N3D4 1523 aa14.46□□□□□ -0.1
UBE2N-206ENST00000552442 BCORL1Q5H9F3 1711 aa14.44□□□□□ -0.1
UBE2N-206ENST00000552442 ABCC1P33527 1531 aa14.44□□□□□ -0.1
UBE2N-206ENST00000552442 MTUS2Q5JR59 1369 aa14.44□□□□□ -0.1
UBE2N-206ENST00000552442 MAGI2Q86UL8 1455 aa14.44□□□□□ -0.1
UBE2N-206ENST00000552442 ADAMTSL3P82987 1691 aa14.43□□□□□ -0.1
UBE2N-206ENST00000552442 ZNF518AQ6AHZ1 1483 aa14.43□□□□□ -0.1
UBE2N-206ENST00000552442 KDM5CP41229 1560 aa14.43□□□□□ -0.1
UBE2N-206ENST00000552442 VPS8Q8N3P4 1428 aa14.42□□□□□ -0.1
UBE2N-206ENST00000552442 SIGLEC1Q9BZZ2 1709 aa14.41□□□□□ -0.1
UBE2N-206ENST00000552442 VASPP50552 380 aaPredicted RBP14.41□□□□□ -0.1
UBE2N-206ENST00000552442 TIAM1Q13009 1591 aa14.41□□□□□ -0.1
UBE2N-206ENST00000552442 SAMD9LQ8IVG5 1584 aa14.41□□□□□ -0.1
UBE2N-206ENST00000552442 HECW2Q9P2P5 1572 aa14.41□□□□□ -0.1
UBE2N-206ENST00000552442 SUPT6HQ7KZ85 1726 aaKnown RBP14.41□□□□□ -0.1
UBE2N-206ENST00000552442 YEATS2Q9ULM3 1422 aa14.41□□□□□ -0.1
UBE2N-206ENST00000552442 GPATCH8Q9UKJ3 1502 aaKnown RBP14.4□□□□□ -0.1
UBE2N-206ENST00000552442 MADDQ8WXG6 1647 aa14.39□□□□□ -0.11
UBE2N-206ENST00000552442 ARID4BQ4LE39 1312 aaPredicted RBP14.38□□□□□ -0.11
UBE2N-206ENST00000552442 CCNB3Q8WWL7 1395 aa14.37□□□□□ -0.11
UBE2N-206ENST00000552442 SYCP2Q9BX26 1530 aa14.37□□□□□ -0.11
UBE2N-206ENST00000552442 ARHGEF12Q9NZN5 1544 aa14.37□□□□□ -0.11
UBE2N-206ENST00000552442 RIMS1Q86UR5 1692 aaKnown RBP14.37□□□□□ -0.11
UBE2N-206ENST00000552442 ABCA6Q8N139 1617 aa14.37□□□□□ -0.11
UBE2N-206ENST00000552442 DIP2CQ9Y2E4 1556 aa14.36□□□□□ -0.11
UBE2N-206ENST00000552442 FER1L4A9Z1Z3 1794 aa14.36□□□□□ -0.11
UBE2N-206ENST00000552442 KIDINS220Q9ULH0 1771 aa14.35□□□□□ -0.11
UBE2N-206ENST00000552442 C9orf84Q5VXU9 1444 aa14.35□□□□□ -0.11
UBE2N-206ENST00000552442 TRAPPC8Q9Y2L5 1435 aa14.35□□□□□ -0.11
UBE2N-206ENST00000552442 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
UBE2N-206ENST00000552442 ATP10AO60312 1499 aa14.35□□□□□ -0.11
UBE2N-206ENST00000552442 PLEKHH2Q8IVE3 1493 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms