RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
TMEM116-215ENST00000552374 CFAP74Q9C0B2 1584 aa17.36■□□□□ 0.37
TMEM116-215ENST00000552374 FRMPD1Q5SYB0 1578 aa17.35■□□□□ 0.37
TMEM116-215ENST00000552374 POGZQ7Z3K3 1410 aa17.32■□□□□ 0.36
TMEM116-215ENST00000552374 YEATS2Q9ULM3 1422 aa17.32■□□□□ 0.36
TMEM116-215ENST00000552374 MLECQ14165 292 aa17.32■□□□□ 0.36
TMEM116-215ENST00000552374 CFDP1Q9UEE9 299 aaPredicted RBP17.32■□□□□ 0.36
TMEM116-215ENST00000552374 MYO5CQ9NQX4 1742 aa17.31■□□□□ 0.36
TMEM116-215ENST00000552374 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
TMEM116-215ENST00000552374 HNRNPMP52272 730 aaKnown RBP eCLIP17.3■□□□□ 0.36
TMEM116-215ENST00000552374 RICTORQ6R327 1708 aa17.29■□□□□ 0.36
TMEM116-215ENST00000552374 MAGI2Q86UL8 1455 aa17.29■□□□□ 0.36
TMEM116-215ENST00000552374 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
TMEM116-215ENST00000552374 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.36
TMEM116-215ENST00000552374 GPATCH8Q9UKJ3 1502 aaKnown RBP17.27■□□□□ 0.36
TMEM116-215ENST00000552374 ZNF518AQ6AHZ1 1483 aa17.26■□□□□ 0.35
TMEM116-215ENST00000552374 TRAPPC8Q9Y2L5 1435 aa17.26■□□□□ 0.35
TMEM116-215ENST00000552374 ZMYM4Q5VZL5 1548 aa17.26■□□□□ 0.35
TMEM116-215ENST00000552374 ATP10AO60312 1499 aa17.25■□□□□ 0.35
TMEM116-215ENST00000552374 ARHGEF40Q8TER5 1519 aa17.24■□□□□ 0.35
TMEM116-215ENST00000552374 VPS8Q8N3P4 1428 aa17.24■□□□□ 0.35
TMEM116-215ENST00000552374 ARHGEF12Q9NZN5 1544 aa17.24■□□□□ 0.35
TMEM116-215ENST00000552374 ZNF644Q9H582 1327 aaPredicted RBP17.23■□□□□ 0.35
TMEM116-215ENST00000552374 CDC42BPBQ9Y5S2 1711 aa17.23■□□□□ 0.35
TMEM116-215ENST00000552374 PREX2Q70Z35 1606 aa17.21■□□□□ 0.35
TMEM116-215ENST00000552374 SPAG9O60271 1321 aaKnown RBP17.2■□□□□ 0.34
TMEM116-215ENST00000552374 PTPRMP28827 1452 aa17.2■□□□□ 0.34
TMEM116-215ENST00000552374 APLP2Q06481 763 aa17.2■□□□□ 0.34
TMEM116-215ENST00000552374 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
TMEM116-215ENST00000552374 C9orf84Q5VXU9 1444 aa17.2■□□□□ 0.34
TMEM116-215ENST00000552374 ABCC1P33527 1531 aa17.18■□□□□ 0.34
TMEM116-215ENST00000552374 MLH3Q9UHC1 1453 aa17.17■□□□□ 0.34
TMEM116-215ENST00000552374 ADAMTSL3P82987 1691 aa17.17■□□□□ 0.34
TMEM116-215ENST00000552374 CDC42BPAQ5VT25 1732 aa17.17■□□□□ 0.34
TMEM116-215ENST00000552374 EHBP1L1Q8N3D4 1523 aa17.17■□□□□ 0.34
TMEM116-215ENST00000552374 KIAA1107Q9UPP5 1409 aa17.16■□□□□ 0.34
TMEM116-215ENST00000552374 BCORL1Q5H9F3 1711 aa17.16■□□□□ 0.34
TMEM116-215ENST00000552374 KDM5CP41229 1560 aa17.16■□□□□ 0.34
TMEM116-215ENST00000552374 NCOA2Q15596 1464 aa17.15■□□□□ 0.34
TMEM116-215ENST00000552374 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
TMEM116-215ENST00000552374 SYCP2Q9BX26 1530 aa17.14■□□□□ 0.33
TMEM116-215ENST00000552374 SAMD9LQ8IVG5 1584 aa17.14■□□□□ 0.33
TMEM116-215ENST00000552374 CEBPAP49715 358 aaPredicted RBP17.13■□□□□ 0.33
TMEM116-215ENST00000552374 ESF1Q9H501 851 aaKnown RBP17.13■□□□□ 0.33
TMEM116-215ENST00000552374 MADDQ8WXG6 1647 aa17.13■□□□□ 0.33
TMEM116-215ENST00000552374 LRRC9Q6ZRR7 1453 aa17.12■□□□□ 0.33
TMEM116-215ENST00000552374 HECW2Q9P2P5 1572 aa17.12■□□□□ 0.33
TMEM116-215ENST00000552374 TIAM1Q13009 1591 aa17.12■□□□□ 0.33
TMEM116-215ENST00000552374 SIGLEC1Q9BZZ2 1709 aa17.1■□□□□ 0.33
TMEM116-215ENST00000552374 ITSN2Q9NZM3 1697 aa17.09■□□□□ 0.33
TMEM116-215ENST00000552374 RSPH4AQ5TD94 716 aa17.09■□□□□ 0.33
TMEM116-215ENST00000552374 DIP2CQ9Y2E4 1556 aa17.09■□□□□ 0.33
TMEM116-215ENST00000552374 TSPY4P0CV99 314 aa17.07■□□□□ 0.32
TMEM116-215ENST00000552374 TSPY10P0CW01 314 aa17.07■□□□□ 0.32
TMEM116-215ENST00000552374 MBD5Q9P267 1494 aa17.07■□□□□ 0.32
TMEM116-215ENST00000552374 RIMS1Q86UR5 1692 aaKnown RBP17.07■□□□□ 0.32
TMEM116-215ENST00000552374 GGT6Q6P531 493 aa17.06■□□□□ 0.32
TMEM116-215ENST00000552374 ABCA6Q8N139 1617 aa17.06■□□□□ 0.32
TMEM116-215ENST00000552374 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
TMEM116-215ENST00000552374 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
TMEM116-215ENST00000552374 HSPA2P54652 639 aa17.04■□□□□ 0.32
TMEM116-215ENST00000552374 KIDINS220Q9ULH0 1771 aa17.04■□□□□ 0.32
TMEM116-215ENST00000552374 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
TMEM116-215ENST00000552374 AGLP35573 1532 aa17.02■□□□□ 0.31
TMEM116-215ENST00000552374 A2MP01023 1474 aa17.02■□□□□ 0.31
TMEM116-215ENST00000552374 CAMSAP2Q08AD1 1489 aa17.02■□□□□ 0.31
TMEM116-215ENST00000552374 REREQ9P2R6 1566 aa17.01■□□□□ 0.31
TMEM116-215ENST00000552374 RTEL1-TNFRSF6BF6WH68 1400 aa17■□□□□ 0.31
TMEM116-215ENST00000552374 CCDC141Q6ZP82 1450 aa16.99■□□□□ 0.31
TMEM116-215ENST00000552374 KIF3BO15066 747 aa16.99■□□□□ 0.31
TMEM116-215ENST00000552374 DHX29Q7Z478 1369 aaKnown RBP16.98■□□□□ 0.31
TMEM116-215ENST00000552374 MYOM3Q5VTT5 1437 aa16.98■□□□□ 0.31
TMEM116-215ENST00000552374 FER1L4A9Z1Z3 1794 aa16.97■□□□□ 0.31
TMEM116-215ENST00000552374 LMTK3Q96Q04 1460 aa16.97■□□□□ 0.31
TMEM116-215ENST00000552374 MIA2Q96PC5 1412 aa16.96■□□□□ 0.31
TMEM116-215ENST00000552374 ZMYM3Q14202 1370 aa16.96■□□□□ 0.31
TMEM116-215ENST00000552374 INO80Q9ULG1 1556 aaPredicted RBP16.95■□□□□ 0.3
TMEM116-215ENST00000552374 CNTLNQ9NXG0 1405 aa16.95■□□□□ 0.3
TMEM116-215ENST00000552374 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
TMEM116-215ENST00000552374 PPARGC1BQ86YN6 1023 aaKnown RBP16.91■□□□□ 0.3
TMEM116-215ENST00000552374 FAM50AQ14320 339 aaKnown RBP16.9■□□□□ 0.3
TMEM116-215ENST00000552374 RRP7BPQ9NSQ0 103 aa16.9■□□□□ 0.3
TMEM116-215ENST00000552374 WASHC2CQ9Y4E1 1318 aa16.9■□□□□ 0.3
TMEM116-215ENST00000552374 UHRF1BP1Q6BDS2 1440 aa16.9■□□□□ 0.3
TMEM116-215ENST00000552374 CHIC2Q9UKJ5 165 aa16.89■□□□□ 0.29
TMEM116-215ENST00000552374 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.29
TMEM116-215ENST00000552374 PLXNC1O60486 1568 aa16.88■□□□□ 0.29
TMEM116-215ENST00000552374 FGD6Q6ZV73 1430 aa16.87■□□□□ 0.29
TMEM116-215ENST00000552374 ABCC5O15440 1437 aa16.86■□□□□ 0.29
TMEM116-215ENST00000552374 ADGBQ8N7X0 1667 aa16.86■□□□□ 0.29
TMEM116-215ENST00000552374 FBXO31Q5XUX0 539 aaPredicted RBP16.85■□□□□ 0.29
TMEM116-215ENST00000552374 ILDR1Q86SU0 546 aaPredicted RBP16.84■□□□□ 0.29
TMEM116-215ENST00000552374 C3P01024 1663 aa16.84■□□□□ 0.29
TMEM116-215ENST00000552374 SETD1BQ9UPS6 1966 aaKnown RBP16.83■□□□□ 0.29
TMEM116-215ENST00000552374 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
TMEM116-215ENST00000552374 PTPN23Q9H3S7 1636 aa16.82■□□□□ 0.28
TMEM116-215ENST00000552374 NPATQ14207 1427 aa16.82■□□□□ 0.28
TMEM116-215ENST00000552374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.28
TMEM116-215ENST00000552374 KIF15Q9NS87 1388 aa16.81■□□□□ 0.28
TMEM116-215ENST00000552374 DAPK1P53355 1430 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms