RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 MS4A4AQ96JQ5 239 aa14.9□□□□□ -0.02
BEST3-211ENST00000552295 FAM205CA6NFA0 338 aa14.89□□□□□ -0.03
BEST3-211ENST00000552295 HS3ST6Q96QI5 342 aa14.88□□□□□ -0.03
BEST3-211ENST00000552295 BCL11BQ9C0K0 894 aaPredicted RBP14.88□□□□□ -0.03
BEST3-211ENST00000552295 ECM2O94769 699 aaPredicted RBP14.85□□□□□ -0.03
BEST3-211ENST00000552295 SPNS2Q8IVW8 549 aa14.85□□□□□ -0.03
BEST3-211ENST00000552295 POTEB3A0JP26 581 aa14.84□□□□□ -0.03
BEST3-211ENST00000552295 NLRP6P59044 892 aa14.84□□□□□ -0.03
BEST3-211ENST00000552295 POTEBQ6S5H4 581 aa14.84□□□□□ -0.03
BEST3-211ENST00000552295 STK24Q9Y6E0 443 aa14.84□□□□□ -0.03
BEST3-211ENST00000552295 HOXB1P14653 301 aaPredicted RBP14.83□□□□□ -0.04
BEST3-211ENST00000552295 RIMBP2O15034 1052 aa14.82□□□□□ -0.04
BEST3-211ENST00000552295 TMEM92Q6UXU6 159 aa14.82□□□□□ -0.04
BEST3-211ENST00000552295 STK25O00506 426 aa14.79□□□□□ -0.04
BEST3-211ENST00000552295 MMRN1Q13201 1228 aa14.79□□□□□ -0.04
BEST3-211ENST00000552295 FBXO22Q8NEZ5 403 aa14.77□□□□□ -0.05
BEST3-211ENST00000552295 KRTAP3-3Q9BYR6 98 aa14.75□□□□□ -0.05
BEST3-211ENST00000552295 KRTAP3-2Q9BYR7 98 aa14.75□□□□□ -0.05
BEST3-211ENST00000552295 ERBB3P21860 1342 aa14.74□□□□□ -0.05
BEST3-211ENST00000552295 PKD2Q13563 968 aa14.74□□□□□ -0.05
BEST3-211ENST00000552295 MFRPQ9BY79 579 aa14.73□□□□□ -0.05
BEST3-211ENST00000552295 ZSWIM6Q9HCJ5 1215 aa14.73□□□□□ -0.05
BEST3-211ENST00000552295 RGL2O15211 777 aa14.71□□□□□ -0.05
BEST3-211ENST00000552295 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
BEST3-211ENST00000552295 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
BEST3-211ENST00000552295 VARS2Q5ST30 1063 aaKnown RBP14.63□□□□□ -0.07
BEST3-211ENST00000552295 ARSIQ5FYB1 569 aa14.58□□□□□ -0.08
BEST3-211ENST00000552295 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
BEST3-211ENST00000552295 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
BEST3-211ENST00000552295 C2orf72A6NCS6 295 aa14.55□□□□□ -0.08
BEST3-211ENST00000552295 KIF3CO14782 793 aa14.54□□□□□ -0.08
BEST3-211ENST00000552295 ZNF687Q8N1G0 1237 aa14.54□□□□□ -0.08
BEST3-211ENST00000552295 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
BEST3-211ENST00000552295 EIF4G1Q04637 1599 aaKnown RBP14.51□□□□□ -0.09
BEST3-211ENST00000552295 TMC2Q8TDI7 906 aa14.49□□□□□ -0.09
BEST3-211ENST00000552295 KHSRPQ92945 711 aaKnown RBP eCLIP14.49□□□□□ -0.09
BEST3-211ENST00000552295 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
BEST3-211ENST00000552295 ZNF316A6NFI3 1004 aaPredicted RBP14.47□□□□□ -0.09
BEST3-211ENST00000552295 PPP1R37O75864 691 aa14.46□□□□□ -0.09
BEST3-211ENST00000552295 HS6ST3Q8IZP7 471 aa14.43□□□□□ -0.1
BEST3-211ENST00000552295 WIZO95785 1651 aa14.42□□□□□ -0.1
BEST3-211ENST00000552295 SLC34A2O95436 690 aa14.41□□□□□ -0.1
BEST3-211ENST00000552295 NUDT7P0C024 238 aa14.4□□□□□ -0.1
BEST3-211ENST00000552295 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
BEST3-211ENST00000552295 RNF166Q96A37 237 aaPredicted RBP14.39□□□□□ -0.11
BEST3-211ENST00000552295 PCDHGA4Q9Y5G9 962 aa14.39□□□□□ -0.11
BEST3-211ENST00000552295 SUPT5HO00267 1087 aaKnown RBP14.37□□□□□ -0.11
BEST3-211ENST00000552295 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
BEST3-211ENST00000552295 CC2D2AQ9P2K1 1620 aa14.36□□□□□ -0.11
BEST3-211ENST00000552295 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
BEST3-211ENST00000552295 CHGAP10645 457 aaKnown RBP14.34□□□□□ -0.11
BEST3-211ENST00000552295 PTGER2P43116 358 aa14.34□□□□□ -0.11
BEST3-211ENST00000552295 ANKRD13DQ6ZTN6 518 aa14.34□□□□□ -0.11
BEST3-211ENST00000552295 ATAD2BQ9ULI0 1458 aa14.33□□□□□ -0.12
BEST3-211ENST00000552295 LHX6Q9UPM6 363 aa14.32□□□□□ -0.12
BEST3-211ENST00000552295 PBX2P40425 430 aa14.29□□□□□ -0.12
BEST3-211ENST00000552295 LSM11P83369 360 aaKnown RBP eCLIP14.29□□□□□ -0.12
BEST3-211ENST00000552295 TOP2AP11388 1531 aaKnown RBP14.26□□□□□ -0.13
BEST3-211ENST00000552295 NCAPD3P42695 1498 aa14.26□□□□□ -0.13
BEST3-211ENST00000552295 FOXK1P85037 733 aa14.26□□□□□ -0.13
BEST3-211ENST00000552295 HMGXB3Q12766 1538 aa14.25□□□□□ -0.13
BEST3-211ENST00000552295 PLPP6Q8IY26 295 aa14.25□□□□□ -0.13
BEST3-211ENST00000552295 GPHNQ9NQX3 736 aaPredicted RBP14.25□□□□□ -0.13
BEST3-211ENST00000552295 PTCD2Q8WV60 388 aaKnown RBP14.24□□□□□ -0.13
BEST3-211ENST00000552295 BAZ1BQ9UIG0 1483 aaKnown RBP14.24□□□□□ -0.13
BEST3-211ENST00000552295 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
BEST3-211ENST00000552295 PSDA5PKW4 1024 aaPredicted RBP14.22□□□□□ -0.13
BEST3-211ENST00000552295 RYDENQ9NUL5 291 aaKnown RBP14.22□□□□□ -0.13
BEST3-211ENST00000552295 AXIN2Q9Y2T1 843 aa14.21□□□□□ -0.13
BEST3-211ENST00000552295 DSG2Q14126 1118 aa14.2□□□□□ -0.14
BEST3-211ENST00000552295 POTEEQ6S8J3 1075 aa14.2□□□□□ -0.14
BEST3-211ENST00000552295 NKX1-1Q15270 411 aaPredicted RBP14.19□□□□□ -0.14
BEST3-211ENST00000552295 KDM4FA0A1W2PPD8 638 aa14.17□□□□□ -0.14
BEST3-211ENST00000552295 TBC1D12O60347 775 aa14.17□□□□□ -0.14
BEST3-211ENST00000552295 ARHGAP33O14559 1287 aa14.13□□□□□ -0.15
BEST3-211ENST00000552295 PPP4R3BQ5MIZ7 849 aa14.09□□□□□ -0.15
BEST3-211ENST00000552295 CCDC88BA6NC98 1476 aa14.08□□□□□ -0.16
BEST3-211ENST00000552295 ADGRD1Q6QNK2 874 aa14.07□□□□□ -0.16
BEST3-211ENST00000552295 CRISPLD2Q9H0B8 497 aa14.07□□□□□ -0.16
BEST3-211ENST00000552295 OXER1Q8TDS5 423 aa14.05□□□□□ -0.16
BEST3-211ENST00000552295 PPP1R15BQ5SWA1 713 aa14.04□□□□□ -0.16
BEST3-211ENST00000552295 UPF1Q92900 1129 aaKnown RBP eCLIP14.04□□□□□ -0.16
BEST3-211ENST00000552295 PSEN2P49810 448 aa14.03□□□□□ -0.16
BEST3-211ENST00000552295 TK2O00142 265 aa14.02□□□□□ -0.17
BEST3-211ENST00000552295 DMRTA1Q5VZB9 504 aa14.02□□□□□ -0.17
BEST3-211ENST00000552295 PDE4AP27815 886 aa14.01□□□□□ -0.17
BEST3-211ENST00000552295 KCNH8Q96L42 1107 aa14□□□□□ -0.17
BEST3-211ENST00000552295 GTPBP6O43824 516 aaPredicted RBP13.99□□□□□ -0.17
BEST3-211ENST00000552295 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
BEST3-211ENST00000552295 KCNK17Q96T54 332 aa13.96□□□□□ -0.17
BEST3-211ENST00000552295 HCSTQ9UBK5 93 aa13.96□□□□□ -0.17
BEST3-211ENST00000552295 HRO43593 1189 aa13.95□□□□□ -0.18
BEST3-211ENST00000552295 ZNF454Q8N9F8 522 aa13.94□□□□□ -0.18
BEST3-211ENST00000552295 STAC3Q96MF2 364 aa13.93□□□□□ -0.18
BEST3-211ENST00000552295 LARP6Q9BRS8 491 aaKnown RBP13.92□□□□□ -0.18
BEST3-211ENST00000552295 DDX27Q96GQ7 796 aaKnown RBP13.9□□□□□ -0.18
BEST3-211ENST00000552295 PRDM2Q13029 1718 aa13.89□□□□□ -0.19
BEST3-211ENST00000552295 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
BEST3-211ENST00000552295 CFTRP13569 1480 aa13.87□□□□□ -0.19
BEST3-211ENST00000552295 FOSBP53539 338 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms