RNA–Protein interactions for RNA: ENST00000552268.5

APAF1-211, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-211ENST00000552268 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
APAF1-211ENST00000552268 SMARCA2P51531 1590 aa11.96□□□□□ -0.49
APAF1-211ENST00000552268 NLRP6P59044 892 aa11.95□□□□□ -0.5
APAF1-211ENST00000552268 LCE2DQ5TA82 110 aaPredicted RBP11.94□□□□□ -0.5
APAF1-211ENST00000552268 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
APAF1-211ENST00000552268 TMEM121BQ9BXQ6 578 aaPredicted RBP11.94□□□□□ -0.5
APAF1-211ENST00000552268 WIZO95785 1651 aa11.94□□□□□ -0.5
APAF1-211ENST00000552268 POTEMA6NI47 508 aa11.93□□□□□ -0.5
APAF1-211ENST00000552268 SNPHO15079 494 aa11.93□□□□□ -0.5
APAF1-211ENST00000552268 POTEGQ6S5H5 508 aa11.92□□□□□ -0.5
APAF1-211ENST00000552268 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
APAF1-211ENST00000552268 HMGXB3Q12766 1538 aa11.91□□□□□ -0.5
APAF1-211ENST00000552268 MICALL2Q8IY33 904 aa11.9□□□□□ -0.5
APAF1-211ENST00000552268 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
APAF1-211ENST00000552268 BAZ1BQ9UIG0 1483 aaKnown RBP11.89□□□□□ -0.51
APAF1-211ENST00000552268 ST18O60284 1047 aa11.86□□□□□ -0.51
APAF1-211ENST00000552268 HS6ST3Q8IZP7 471 aa11.86□□□□□ -0.51
APAF1-211ENST00000552268 TOP2AP11388 1531 aaKnown RBP11.82□□□□□ -0.52
APAF1-211ENST00000552268 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
APAF1-211ENST00000552268 CHGAP10645 457 aaKnown RBP11.8□□□□□ -0.52
APAF1-211ENST00000552268 PCDH10Q9P2E7 1040 aa11.78□□□□□ -0.52
APAF1-211ENST00000552268 TMEM92Q6UXU6 159 aa11.76□□□□□ -0.53
APAF1-211ENST00000552268 DNAJC5Q9H3Z4 198 aa11.74□□□□□ -0.53
APAF1-211ENST00000552268 CCDC88BA6NC98 1476 aa11.73□□□□□ -0.53
APAF1-211ENST00000552268 HOXB3P14651 431 aaPredicted RBP11.72□□□□□ -0.53
APAF1-211ENST00000552268 DOK7Q18PE1 504 aa11.72□□□□□ -0.53
APAF1-211ENST00000552268 PPP1R37O75864 691 aa11.69□□□□□ -0.54
APAF1-211ENST00000552268 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
APAF1-211ENST00000552268 MARVELD3Q96A59 401 aa11.68□□□□□ -0.54
APAF1-211ENST00000552268 RIMBP2O15034 1052 aa11.67□□□□□ -0.54
APAF1-211ENST00000552268 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
APAF1-211ENST00000552268 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
APAF1-211ENST00000552268 RYDENQ9NUL5 291 aaKnown RBP11.66□□□□□ -0.54
APAF1-211ENST00000552268 NESP48681 1621 aa11.66□□□□□ -0.54
APAF1-211ENST00000552268 EMP3P54852 163 aa11.65□□□□□ -0.54
APAF1-211ENST00000552268 KIF3CO14782 793 aa11.64□□□□□ -0.55
APAF1-211ENST00000552268 CDAN1Q8IWY9 1227 aa11.64□□□□□ -0.55
APAF1-211ENST00000552268 CFTRP13569 1480 aa11.63□□□□□ -0.55
APAF1-211ENST00000552268 HOXB1P14653 301 aaPredicted RBP11.63□□□□□ -0.55
APAF1-211ENST00000552268 C2orf72A6NCS6 295 aa11.62□□□□□ -0.55
APAF1-211ENST00000552268 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
APAF1-211ENST00000552268 TMC2Q8TDI7 906 aa11.61□□□□□ -0.55
APAF1-211ENST00000552268 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
APAF1-211ENST00000552268 PLSCR2Q9NRY7 297 aa11.6□□□□□ -0.55
APAF1-211ENST00000552268 LAMC3Q9Y6N6 1575 aa11.59□□□□□ -0.55
APAF1-211ENST00000552268 FAM205CA6NFA0 338 aa11.57□□□□□ -0.56
APAF1-211ENST00000552268 GPR153Q6NV75 609 aa11.55□□□□□ -0.56
APAF1-211ENST00000552268 HS3ST6Q96QI5 342 aa11.55□□□□□ -0.56
APAF1-211ENST00000552268 PDS5BQ9NTI5 1447 aa11.53□□□□□ -0.56
APAF1-211ENST00000552268 GTPBP6O43824 516 aaPredicted RBP11.52□□□□□ -0.57
APAF1-211ENST00000552268 ERBB3P21860 1342 aa11.51□□□□□ -0.57
APAF1-211ENST00000552268 POTEB3A0JP26 581 aa11.5□□□□□ -0.57
APAF1-211ENST00000552268 POTEBQ6S5H4 581 aa11.5□□□□□ -0.57
APAF1-211ENST00000552268 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
APAF1-211ENST00000552268 FANCD2Q9BXW9 1451 aa11.5□□□□□ -0.57
APAF1-211ENST00000552268 SLC34A2O95436 690 aa11.49□□□□□ -0.57
APAF1-211ENST00000552268 ARSIQ5FYB1 569 aa11.49□□□□□ -0.57
APAF1-211ENST00000552268 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
APAF1-211ENST00000552268 FOXK1P85037 733 aa11.48□□□□□ -0.57
APAF1-211ENST00000552268 ERCC6Q03468 1493 aa11.45□□□□□ -0.58
APAF1-211ENST00000552268 KIF21AQ7Z4S6 1674 aa11.44□□□□□ -0.58
APAF1-211ENST00000552268 VARS2Q5ST30 1063 aaKnown RBP11.44□□□□□ -0.58
APAF1-211ENST00000552268 PLPP6Q8IY26 295 aa11.44□□□□□ -0.58
APAF1-211ENST00000552268 DSG2Q14126 1118 aa11.43□□□□□ -0.58
APAF1-211ENST00000552268 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.589e-8■■■□□ 18.1
APAF1-211ENST00000552268 PCDHGA4Q9Y5G9 962 aa11.43□□□□□ -0.58
APAF1-211ENST00000552268 CEP164Q9UPV0 1460 aa11.43□□□□□ -0.58
APAF1-211ENST00000552268 BBXQ8WY36 941 aaPredicted RBP11.42□□□□□ -0.58
APAF1-211ENST00000552268 CRISPLD2Q9H0B8 497 aa11.42□□□□□ -0.58
APAF1-211ENST00000552268 KRTAP3-3Q9BYR6 98 aa11.41□□□□□ -0.58
APAF1-211ENST00000552268 KRTAP3-2Q9BYR7 98 aa11.41□□□□□ -0.58
APAF1-211ENST00000552268 PRDM2Q13029 1718 aa11.4□□□□□ -0.58
APAF1-211ENST00000552268 MRC2Q9UBG0 1479 aa11.4□□□□□ -0.58
APAF1-211ENST00000552268 ZNF316A6NFI3 1004 aaPredicted RBP11.4□□□□□ -0.58
APAF1-211ENST00000552268 THOC2Q8NI27 1593 aaKnown RBP11.4□□□□□ -0.58
APAF1-211ENST00000552268 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.59
APAF1-211ENST00000552268 NUDT7P0C024 238 aa11.39□□□□□ -0.59
APAF1-211ENST00000552268 PDE4AP27815 886 aa11.39□□□□□ -0.59
APAF1-211ENST00000552268 PTCD2Q8WV60 388 aaKnown RBP11.39□□□□□ -0.59
APAF1-211ENST00000552268 ZNF687Q8N1G0 1237 aa11.38□□□□□ -0.59
APAF1-211ENST00000552268 WDR62O43379 1518 aa11.37□□□□□ -0.59
APAF1-211ENST00000552268 NCKAP5LQ9HCH0 1330 aa11.36□□□□□ -0.59
APAF1-211ENST00000552268 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
APAF1-211ENST00000552268 PPP1R15BQ5SWA1 713 aa11.35□□□□□ -0.59
APAF1-211ENST00000552268 TOPBP1Q92547 1522 aa11.35□□□□□ -0.59
APAF1-211ENST00000552268 TBC1D12O60347 775 aa11.33□□□□□ -0.6
APAF1-211ENST00000552268 LHX6Q9UPM6 363 aa11.33□□□□□ -0.6
APAF1-211ENST00000552268 CUX1P39880 1505 aa11.33□□□□□ -0.6
APAF1-211ENST00000552268 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
APAF1-211ENST00000552268 CUX2O14529 1486 aa11.32□□□□□ -0.6
APAF1-211ENST00000552268 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.31□□□□□ -0.6
APAF1-211ENST00000552268 WRNQ14191 1432 aaPredicted RBP eCLIP11.31□□□□□ -0.6
APAF1-211ENST00000552268 DNMBPQ6XZF7 1577 aa11.31□□□□□ -0.6
APAF1-211ENST00000552268 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
APAF1-211ENST00000552268 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
APAF1-211ENST00000552268 LARP6Q9BRS8 491 aaKnown RBP11.3□□□□□ -0.6
APAF1-211ENST00000552268 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
APAF1-211ENST00000552268 MMRN1Q13201 1228 aa11.29□□□□□ -0.6
APAF1-211ENST00000552268 MFSD10Q14728 455 aa11.29□□□□□ -0.6
APAF1-211ENST00000552268 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms