RNA–Protein interactions for RNA: ENST00000552231.5

CNOT2-236, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 1,545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-236ENST00000552231 ARID4BQ4LE39 1312 aaPredicted RBP28.05■■■□□ 2.08
CNOT2-236ENST00000552231 MYO5CQ9NQX4 1742 aa28.05■■■□□ 2.08
CNOT2-236ENST00000552231 ADAMTSL3P82987 1691 aa28.02■■■□□ 2.08
CNOT2-236ENST00000552231 YEATS2Q9ULM3 1422 aa28.01■■■□□ 2.07
CNOT2-236ENST00000552231 ARHGAP5Q13017 1502 aa28■■■□□ 2.07
CNOT2-236ENST00000552231 ZFYVE16Q7Z3T8 1539 aa28■■■□□ 2.07
CNOT2-236ENST00000552231 BCORL1Q5H9F3 1711 aa27.98■■■□□ 2.07
CNOT2-236ENST00000552231 PTPRMP28827 1452 aa27.97■■■□□ 2.07
CNOT2-236ENST00000552231 ZNF518AQ6AHZ1 1483 aa27.95■■■□□ 2.06
CNOT2-236ENST00000552231 HECW2Q9P2P5 1572 aa27.93■■■□□ 2.06
CNOT2-236ENST00000552231 AFAP1Q8N556 730 aa27.92■■■□□ 2.06
CNOT2-236ENST00000552231 ATP10AO60312 1499 aa27.9■■■□□ 2.06
CNOT2-236ENST00000552231 CEP162Q5TB80 1403 aa27.9■■■□□ 2.06
CNOT2-236ENST00000552231 CDC42BPBQ9Y5S2 1711 aa27.89■■■□□ 2.06
CNOT2-236ENST00000552231 PREX2Q70Z35 1606 aa27.89■■■□□ 2.05
CNOT2-236ENST00000552231 MADDQ8WXG6 1647 aa27.88■■■□□ 2.05
CNOT2-236ENST00000552231 KDM5CP41229 1560 aa27.88■■■□□ 2.05
CNOT2-236ENST00000552231 C9orf84Q5VXU9 1444 aa27.86■■■□□ 2.05
CNOT2-236ENST00000552231 ABCC1P33527 1531 aa27.83■■■□□ 2.05
CNOT2-236ENST00000552231 MLH3Q9UHC1 1453 aa27.82■■■□□ 2.04
CNOT2-236ENST00000552231 SIGLEC1Q9BZZ2 1709 aa27.82■■■□□ 2.04
CNOT2-236ENST00000552231 ARHGEF12Q9NZN5 1544 aa27.82■■■□□ 2.04
CNOT2-236ENST00000552231 GPATCH8Q9UKJ3 1502 aaKnown RBP27.82■■■□□ 2.04
CNOT2-236ENST00000552231 TRAPPC8Q9Y2L5 1435 aa27.81■■■□□ 2.04
CNOT2-236ENST00000552231 MTUS2Q5JR59 1369 aa27.81■■■□□ 2.04
CNOT2-236ENST00000552231 MLECQ14165 292 aa27.79■■■□□ 2.04
CNOT2-236ENST00000552231 CDC42BPAQ5VT25 1732 aa27.79■■■□□ 2.04
CNOT2-236ENST00000552231 MYT1LQ9UL68 1186 aa27.78■■■□□ 2.04
CNOT2-236ENST00000552231 LOC105371045A0A1W2PR82 267 aa27.76■■■□□ 2.03
CNOT2-236ENST00000552231 ZNF777Q9ULD5 760 aaPredicted RBP27.76■■■□□ 2.03
CNOT2-236ENST00000552231 CCNB3Q8WWL7 1395 aa27.75■■■□□ 2.03
CNOT2-236ENST00000552231 RIMS1Q86UR5 1692 aaKnown RBP27.75■■■□□ 2.03
CNOT2-236ENST00000552231 CFDP1Q9UEE9 299 aaPredicted RBP27.75■■■□□ 2.03
CNOT2-236ENST00000552231 DIP2CQ9Y2E4 1556 aa27.73■■■□□ 2.03
CNOT2-236ENST00000552231 ITSN2Q9NZM3 1697 aa27.73■■■□□ 2.03
CNOT2-236ENST00000552231 REREQ9P2R6 1566 aa27.72■■■□□ 2.03
CNOT2-236ENST00000552231 KIAA1107Q9UPP5 1409 aa27.72■■■□□ 2.03
CNOT2-236ENST00000552231 SAMD9LQ8IVG5 1584 aa27.7■■■□□ 2.03
CNOT2-236ENST00000552231 EHBP1L1Q8N3D4 1523 aa27.69■■■□□ 2.02
CNOT2-236ENST00000552231 PLEKHH2Q8IVE3 1493 aa27.69■■■□□ 2.02
CNOT2-236ENST00000552231 HNRNPMP52272 730 aaKnown RBP eCLIP27.69■■■□□ 2.021e-8■■■■□ 24.2
CNOT2-236ENST00000552231 ABCA6Q8N139 1617 aa27.66■■■□□ 2.02
CNOT2-236ENST00000552231 SYCP2Q9BX26 1530 aa27.66■■■□□ 2.02
CNOT2-236ENST00000552231 LMTK3Q96Q04 1460 aa27.66■■■□□ 2.02
CNOT2-236ENST00000552231 AGLP35573 1532 aa27.65■■■□□ 2.02
CNOT2-236ENST00000552231 SPAG9O60271 1321 aaKnown RBP27.64■■■□□ 2.02
CNOT2-236ENST00000552231 FER1L4A9Z1Z3 1794 aa27.64■■■□□ 2.01
CNOT2-236ENST00000552231 KIDINS220Q9ULH0 1771 aa27.63■■■□□ 2.01
CNOT2-236ENST00000552231 PLPPR3Q6T4P5 718 aa27.62■■■□□ 2.01
CNOT2-236ENST00000552231 VPS8Q8N3P4 1428 aa27.61■■■□□ 2.01
CNOT2-236ENST00000552231 TIAM1Q13009 1591 aa27.61■■■□□ 2.01
CNOT2-236ENST00000552231 ZNF644Q9H582 1327 aaPredicted RBP27.57■■■□□ 2
CNOT2-236ENST00000552231 CEBPAP49715 358 aaPredicted RBP27.56■■■□□ 2
CNOT2-236ENST00000552231 NCOA2Q15596 1464 aa27.54■■■□□ 2
CNOT2-236ENST00000552231 MBD5Q9P267 1494 aa27.53■■■□□ 2
CNOT2-236ENST00000552231 ATP7AQ04656 1500 aa27.53■■■□□ 2
CNOT2-236ENST00000552231 ESF1Q9H501 851 aaKnown RBP27.52■■■□□ 2
CNOT2-236ENST00000552231 HSPA2P54652 639 aa27.51■■□□□ 1.99
CNOT2-236ENST00000552231 SUPT6HQ7KZ85 1726 aaKnown RBP27.49■■□□□ 1.99
CNOT2-236ENST00000552231 INO80Q9ULG1 1556 aaPredicted RBP27.49■■□□□ 1.99
CNOT2-236ENST00000552231 LRRC9Q6ZRR7 1453 aa27.48■■□□□ 1.99
CNOT2-236ENST00000552231 ILDR1Q86SU0 546 aaPredicted RBP27.48■■□□□ 1.99
CNOT2-236ENST00000552231 CNTLNQ9NXG0 1405 aa27.48■■□□□ 1.99
CNOT2-236ENST00000552231 MAP3K1Q13233 1512 aa27.47■■□□□ 1.99
CNOT2-236ENST00000552231 A2MP01023 1474 aa27.47■■□□□ 1.99
CNOT2-236ENST00000552231 RTEL1-TNFRSF6BF6WH68 1400 aa27.47■■□□□ 1.99
CNOT2-236ENST00000552231 RSPH4AQ5TD94 716 aa27.46■■□□□ 1.99
CNOT2-236ENST00000552231 PLXNC1O60486 1568 aa27.44■■□□□ 1.98
CNOT2-236ENST00000552231 KANK4Q5T7N3 995 aaPredicted RBP27.41■■□□□ 1.98
CNOT2-236ENST00000552231 CAMSAP2Q08AD1 1489 aa27.4■■□□□ 1.98
CNOT2-236ENST00000552231 UHRF1BP1Q6BDS2 1440 aa27.4■■□□□ 1.98
CNOT2-236ENST00000552231 PREX1Q8TCU6 1659 aa27.4■■□□□ 1.98
CNOT2-236ENST00000552231 CCDC141Q6ZP82 1450 aa27.39■■□□□ 1.98
CNOT2-236ENST00000552231 PPP6R1Q9UPN7 881 aa27.38■■□□□ 1.97
CNOT2-236ENST00000552231 SETD1BQ9UPS6 1966 aaKnown RBP27.38■■□□□ 1.97
CNOT2-236ENST00000552231 C3P01024 1663 aa27.37■■□□□ 1.97
CNOT2-236ENST00000552231 DHX29Q7Z478 1369 aaKnown RBP27.37■■□□□ 1.97
CNOT2-236ENST00000552231 ZMYM3Q14202 1370 aa27.36■■□□□ 1.97
CNOT2-236ENST00000552231 GGT6Q6P531 493 aa27.35■■□□□ 1.97
CNOT2-236ENST00000552231 ADGBQ8N7X0 1667 aa27.34■■□□□ 1.97
CNOT2-236ENST00000552231 NPATQ14207 1427 aa27.32■■□□□ 1.96
CNOT2-236ENST00000552231 ARHGEF5Q12774 1597 aa27.32■■□□□ 1.96
CNOT2-236ENST00000552231 TSPY4P0CV99 314 aa27.31■■□□□ 1.96
CNOT2-236ENST00000552231 TSPY10P0CW01 314 aa27.31■■□□□ 1.96
CNOT2-236ENST00000552231 MROH2AA6NES4 1674 aa27.31■■□□□ 1.96
CNOT2-236ENST00000552231 MIA2Q96PC5 1412 aa27.3■■□□□ 1.96
CNOT2-236ENST00000552231 APLP2Q06481 763 aa27.29■■□□□ 1.96
CNOT2-236ENST00000552231 MYOM3Q5VTT5 1437 aa27.28■■□□□ 1.96
CNOT2-236ENST00000552231 FBXO41Q8TF61 875 aa27.26■■□□□ 1.96
CNOT2-236ENST00000552231 DMRT2Q9Y5R5 561 aa27.26■■□□□ 1.96
CNOT2-236ENST00000552231 KIF3BO15066 747 aa27.24■■□□□ 1.95
CNOT2-236ENST00000552231 CLTCQ00610 1675 aaKnown RBP27.21■■□□□ 1.95
CNOT2-236ENST00000552231 PTPRKQ15262 1439 aa27.21■■□□□ 1.95
CNOT2-236ENST00000552231 MAST1Q9Y2H9 1570 aa27.17■■□□□ 1.94
CNOT2-236ENST00000552231 FAM135AQ9P2D6 1515 aa27.16■■□□□ 1.94
CNOT2-236ENST00000552231 STRCQ7RTU9 1775 aa27.16■■□□□ 1.94
CNOT2-236ENST00000552231 PTPRTO14522 1441 aa27.15■■□□□ 1.94
CNOT2-236ENST00000552231 NCOA1Q15788 1441 aa27.13■■□□□ 1.93
CNOT2-236ENST00000552231 CERKQ8TCT0 537 aa27.12■■□□□ 1.93
CNOT2-236ENST00000552231 WASHC2CQ9Y4E1 1318 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms