RNA–Protein interactions for RNA: ENST00000552046.1

AC090502.3-201, humanhuman

TSL 3 BASIC

Gene AC090502.3, Length 529 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090502.3-201ENST00000552046 VARS2Q5ST30 1063 aaKnown RBP12.38□□□□□ -0.43
AC090502.3-201ENST00000552046 MYT1LQ9UL68 1186 aa12.37□□□□□ -0.43
AC090502.3-201ENST00000552046 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
AC090502.3-201ENST00000552046 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
AC090502.3-201ENST00000552046 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
AC090502.3-201ENST00000552046 TMEM92Q6UXU6 159 aa12.27□□□□□ -0.45
AC090502.3-201ENST00000552046 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
AC090502.3-201ENST00000552046 CIZ1Q9ULV3 898 aaPredicted RBP12.24□□□□□ -0.45
AC090502.3-201ENST00000552046 GPR153Q6NV75 609 aa12.23□□□□□ -0.45
AC090502.3-201ENST00000552046 EFCAB3Q8N7B9 438 aa12.23□□□□□ -0.45
AC090502.3-201ENST00000552046 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
AC090502.3-201ENST00000552046 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
AC090502.3-201ENST00000552046 CUX2O14529 1486 aa12.2□□□□□ -0.46
AC090502.3-201ENST00000552046 PTGER2P43116 358 aa12.18□□□□□ -0.46
AC090502.3-201ENST00000552046 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
AC090502.3-201ENST00000552046 NCAPD3P42695 1498 aa12.18□□□□□ -0.46
AC090502.3-201ENST00000552046 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
AC090502.3-201ENST00000552046 SMARCA4P51532 1647 aa12.16□□□□□ -0.46
AC090502.3-201ENST00000552046 ATAD2BQ9ULI0 1458 aa12.15□□□□□ -0.46
AC090502.3-201ENST00000552046 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
AC090502.3-201ENST00000552046 IFNLR1Q8IU57 520 aaPredicted RBP12.15□□□□□ -0.46
AC090502.3-201ENST00000552046 BAZ1BQ9UIG0 1483 aaKnown RBP12.13□□□□□ -0.47
AC090502.3-201ENST00000552046 HMGXB3Q12766 1538 aa12.12□□□□□ -0.47
AC090502.3-201ENST00000552046 ARSIQ5FYB1 569 aa12.12□□□□□ -0.47
AC090502.3-201ENST00000552046 MS4A4AQ96JQ5 239 aa12.1□□□□□ -0.47
AC090502.3-201ENST00000552046 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
AC090502.3-201ENST00000552046 KHSRPQ92945 711 aaKnown RBP eCLIP12.09□□□□□ -0.47
AC090502.3-201ENST00000552046 NESP48681 1621 aa12.08□□□□□ -0.48
AC090502.3-201ENST00000552046 LSM11P83369 360 aaKnown RBP eCLIP12.08□□□□□ -0.48
AC090502.3-201ENST00000552046 ZNF316A6NFI3 1004 aaPredicted RBP12.07□□□□□ -0.48
AC090502.3-201ENST00000552046 SOX12O15370 315 aa12.02□□□□□ -0.49
AC090502.3-201ENST00000552046 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
AC090502.3-201ENST00000552046 LAMC3Q9Y6N6 1575 aa11.99□□□□□ -0.49
AC090502.3-201ENST00000552046 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
AC090502.3-201ENST00000552046 PLA2G2EQ9NZK7 142 aa11.98□□□□□ -0.49
AC090502.3-201ENST00000552046 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
AC090502.3-201ENST00000552046 POTEEQ6S8J3 1075 aa11.96□□□□□ -0.49
AC090502.3-201ENST00000552046 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
AC090502.3-201ENST00000552046 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.5
AC090502.3-201ENST00000552046 PEG3Q9GZU2 1588 aa11.96□□□□□ -0.5
AC090502.3-201ENST00000552046 PDS5BQ9NTI5 1447 aa11.95□□□□□ -0.5
AC090502.3-201ENST00000552046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.94□□□□□ -0.5
AC090502.3-201ENST00000552046 RNF25Q96BH1 459 aaPredicted RBP11.94□□□□□ -0.5
AC090502.3-201ENST00000552046 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
AC090502.3-201ENST00000552046 PBX2P40425 430 aa11.93□□□□□ -0.5
AC090502.3-201ENST00000552046 AXIN2Q9Y2T1 843 aa11.93□□□□□ -0.5
AC090502.3-201ENST00000552046 RIOK3O14730 519 aaKnown RBP11.91□□□□□ -0.5
AC090502.3-201ENST00000552046 NUDT7P0C024 238 aa11.91□□□□□ -0.5
AC090502.3-201ENST00000552046 HCSTQ9UBK5 93 aa11.89□□□□□ -0.51
AC090502.3-201ENST00000552046 LHX6Q9UPM6 363 aa11.88□□□□□ -0.51
AC090502.3-201ENST00000552046 KIF3CO14782 793 aa11.86□□□□□ -0.51
AC090502.3-201ENST00000552046 FBXO22Q8NEZ5 403 aa11.86□□□□□ -0.51
AC090502.3-201ENST00000552046 WIZO95785 1651 aa11.86□□□□□ -0.51
AC090502.3-201ENST00000552046 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
AC090502.3-201ENST00000552046 VGFO15240 615 aaPredicted RBP11.85□□□□□ -0.51
AC090502.3-201ENST00000552046 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
AC090502.3-201ENST00000552046 C2orf72A6NCS6 295 aa11.83□□□□□ -0.52
AC090502.3-201ENST00000552046 NLRP6P59044 892 aa11.83□□□□□ -0.52
AC090502.3-201ENST00000552046 ADGRD1Q6QNK2 874 aa11.81□□□□□ -0.52
AC090502.3-201ENST00000552046 PCDHGA4Q9Y5G9 962 aa11.81□□□□□ -0.52
AC090502.3-201ENST00000552046 CEP164Q9UPV0 1460 aa11.81□□□□□ -0.52
AC090502.3-201ENST00000552046 WDR62O43379 1518 aa11.77□□□□□ -0.52
AC090502.3-201ENST00000552046 SLC34A2O95436 690 aa11.76□□□□□ -0.53
AC090502.3-201ENST00000552046 FANCD2Q9BXW9 1451 aa11.76□□□□□ -0.53
AC090502.3-201ENST00000552046 ARHGAP33O14559 1287 aa11.75□□□□□ -0.53
AC090502.3-201ENST00000552046 MFRPQ9BY79 579 aa11.75□□□□□ -0.53
AC090502.3-201ENST00000552046 BCL11BQ9C0K0 894 aaPredicted RBP11.74□□□□□ -0.53
AC090502.3-201ENST00000552046 HRO43593 1189 aa11.71□□□□□ -0.53
AC090502.3-201ENST00000552046 DMRTA1Q5VZB9 504 aa11.7□□□□□ -0.54
AC090502.3-201ENST00000552046 TOP2AP11388 1531 aaKnown RBP11.69□□□□□ -0.54
AC090502.3-201ENST00000552046 TK2O00142 265 aa11.68□□□□□ -0.54
AC090502.3-201ENST00000552046 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
AC090502.3-201ENST00000552046 PSEN2P49810 448 aa11.67□□□□□ -0.54
AC090502.3-201ENST00000552046 KCTD12Q96CX2 325 aaKnown RBP11.67□□□□□ -0.54
AC090502.3-201ENST00000552046 CFTRP13569 1480 aa11.66□□□□□ -0.54
AC090502.3-201ENST00000552046 KDM4FA0A1W2PPD8 638 aa11.66□□□□□ -0.54
AC090502.3-201ENST00000552046 RSF1Q96T23 1441 aaPredicted RBP11.66□□□□□ -0.54
AC090502.3-201ENST00000552046 PSDA5PKW4 1024 aaPredicted RBP11.65□□□□□ -0.54
AC090502.3-201ENST00000552046 TMC2Q8TDI7 906 aa11.65□□□□□ -0.54
AC090502.3-201ENST00000552046 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
AC090502.3-201ENST00000552046 URB2Q14146 1524 aaKnown RBP11.62□□□□□ -0.55
AC090502.3-201ENST00000552046 STK25O00506 426 aa11.57□□□□□ -0.56
AC090502.3-201ENST00000552046 TAOK2Q9UL54 1235 aa11.56□□□□□ -0.56
AC090502.3-201ENST00000552046 PTCD2Q8WV60 388 aaKnown RBP11.55□□□□□ -0.56
AC090502.3-201ENST00000552046 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
AC090502.3-201ENST00000552046 IRX2Q9BZI1 471 aaPredicted RBP11.54□□□□□ -0.56
AC090502.3-201ENST00000552046 IFT140Q96RY7 1462 aa11.54□□□□□ -0.56
AC090502.3-201ENST00000552046 CCDC88BA6NC98 1476 aa11.53□□□□□ -0.56
AC090502.3-201ENST00000552046 PTPN5P54829 565 aa11.53□□□□□ -0.56
AC090502.3-201ENST00000552046 RGS20O76081 388 aa11.52□□□□□ -0.57
AC090502.3-201ENST00000552046 STAC3Q96MF2 364 aa11.52□□□□□ -0.57
AC090502.3-201ENST00000552046 KCNK17Q96T54 332 aa11.52□□□□□ -0.57
AC090502.3-201ENST00000552046 PPP1R37O75864 691 aa11.51□□□□□ -0.57
AC090502.3-201ENST00000552046 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
AC090502.3-201ENST00000552046 ZNF608Q9ULD9 1512 aaPredicted RBP11.5□□□□□ -0.57
AC090502.3-201ENST00000552046 RIMBP3CA6NJZ7 1639 aa11.5□□□□□ -0.57
AC090502.3-201ENST00000552046 RIMBP3BA6NNM3 1639 aa11.5□□□□□ -0.57
AC090502.3-201ENST00000552046 RIMBP3Q9UFD9 1639 aa11.5□□□□□ -0.57
AC090502.3-201ENST00000552046 IFFO2Q5TF58 517 aa11.49□□□□□ -0.57
AC090502.3-201ENST00000552046 VPS9D1Q9Y2B5 631 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms