RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 SUPT6HQ7KZ85 1726 aaKnown RBP7.79□□□□□ -1.16
CCNT1-204ENST00000551989 NPM1P06748 294 aaKnown RBP eCLIP7.79□□□□□ -1.16
CCNT1-204ENST00000551989 PHF12Q96QT6 1004 aa7.79□□□□□ -1.16
CCNT1-204ENST00000551989 POLA1P09884 1462 aaPredicted RBP7.79□□□□□ -1.16
CCNT1-204ENST00000551989 EHBP1L1Q8N3D4 1523 aa7.78□□□□□ -1.16
CCNT1-204ENST00000551989 GCC2Q8IWJ2 1684 aa7.77□□□□□ -1.17
CCNT1-204ENST00000551989 PAK3O75914 559 aaPredicted RBP7.77□□□□□ -1.17
CCNT1-204ENST00000551989 KANK4Q5T7N3 995 aaPredicted RBP7.77□□□□□ -1.17
CCNT1-204ENST00000551989 DAXXQ9UER7 740 aaPredicted RBP7.77□□□□□ -1.17
CCNT1-204ENST00000551989 RAB3GAP2Q9H2M9 1393 aa7.76□□□□□ -1.17
CCNT1-204ENST00000551989 PBRM1Q86U86 1689 aa7.76□□□□□ -1.17
CCNT1-204ENST00000551989 POTEB2H3BUK9 544 aa7.75□□□□□ -1.17
CCNT1-204ENST00000551989 MIER1Q8N108 512 aa7.75□□□□□ -1.17
CCNT1-204ENST00000551989 LRRIQ1Q96JM4 1722 aa7.75□□□□□ -1.17
CCNT1-204ENST00000551989 SNAPC4Q5SXM2 1469 aa7.75□□□□□ -1.17
CCNT1-204ENST00000551989 CCDC18Q5T9S5 1454 aa7.75□□□□□ -1.17
CCNT1-204ENST00000551989 HECW1Q76N89 1606 aa7.74□□□□□ -1.17
CCNT1-204ENST00000551989 AKNAQ7Z591 1439 aa7.73□□□□□ -1.17
CCNT1-204ENST00000551989 OTUD5Q96G74 571 aa7.73□□□□□ -1.17
CCNT1-204ENST00000551989 PHLDB1Q86UU1 1377 aa7.72□□□□□ -1.17
CCNT1-204ENST00000551989 PTPN23Q9H3S7 1636 aa7.72□□□□□ -1.17
CCNT1-204ENST00000551989 FGD6Q6ZV73 1430 aa7.71□□□□□ -1.17
CCNT1-204ENST00000551989 PDS5BQ9NTI5 1447 aa7.71□□□□□ -1.17
CCNT1-204ENST00000551989 GRIN2BQ13224 1484 aa7.71□□□□□ -1.18
CCNT1-204ENST00000551989 AMER1Q5JTC6 1135 aaPredicted RBP7.71□□□□□ -1.18
CCNT1-204ENST00000551989 ASTLQ6HA08 431 aaPredicted RBP7.71□□□□□ -1.18
CCNT1-204ENST00000551989 PLSCR2Q9NRY7 297 aa7.71□□□□□ -1.18
CCNT1-204ENST00000551989 ARHGEF11O15085 1522 aa7.71□□□□□ -1.18
CCNT1-204ENST00000551989 TARBP1Q13395 1621 aaKnown RBP7.7□□□□□ -1.18
CCNT1-204ENST00000551989 HFM1A2PYH4 1435 aa7.7□□□□□ -1.18
CCNT1-204ENST00000551989 POLR1AO95602 1720 aaPredicted RBP7.7□□□□□ -1.18
CCNT1-204ENST00000551989 URB2Q14146 1524 aaKnown RBP7.7□□□□□ -1.18
CCNT1-204ENST00000551989 RANGAP1P46060 587 aaPredicted RBP7.7□□□□□ -1.18
CCNT1-204ENST00000551989 MS4A3Q96HJ5 214 aa7.7□□□□□ -1.18
CCNT1-204ENST00000551989 FHOD3Q2V2M9 1422 aa7.69□□□□□ -1.18
CCNT1-204ENST00000551989 UACAQ9BZF9 1416 aa7.69□□□□□ -1.18
CCNT1-204ENST00000551989 TCOF1Q13428 1488 aaKnown RBP7.69□□□□□ -1.18
CCNT1-204ENST00000551989 GAPVD1Q14C86 1478 aa7.69□□□□□ -1.18
CCNT1-204ENST00000551989 UGGT2Q9NYU1 1516 aa7.69□□□□□ -1.18
CCNT1-204ENST00000551989 CCDC61Q9Y6R9 512 aa7.69□□□□□ -1.18
CCNT1-204ENST00000551989 MYOM3Q5VTT5 1437 aa7.69□□□□□ -1.18
CCNT1-204ENST00000551989 RAD54L2Q9Y4B4 1467 aa7.68□□□□□ -1.18
CCNT1-204ENST00000551989 IQGAP2Q13576 1575 aa7.68□□□□□ -1.18
CCNT1-204ENST00000551989 ATMINO43313 823 aaPredicted RBP7.68□□□□□ -1.18
CCNT1-204ENST00000551989 ADAMTS12P58397 1594 aa7.67□□□□□ -1.18
CCNT1-204ENST00000551989 YTHDC1Q96MU7 727 aaKnown RBP7.66□□□□□ -1.18
CCNT1-204ENST00000551989 MTUS2Q5JR59 1369 aa7.66□□□□□ -1.18
CCNT1-204ENST00000551989 MIA2Q96PC5 1412 aa7.66□□□□□ -1.18
CCNT1-204ENST00000551989 NCOA2Q15596 1464 aa7.66□□□□□ -1.18
CCNT1-204ENST00000551989 NESP48681 1621 aa7.66□□□□□ -1.18
CCNT1-204ENST00000551989 ITSN2Q9NZM3 1697 aa7.65□□□□□ -1.18
CCNT1-204ENST00000551989 CCER2I3L3R5 266 aa7.64□□□□□ -1.19
CCNT1-204ENST00000551989 KIF12Q96FN5 646 aa7.64□□□□□ -1.19
CCNT1-204ENST00000551989 ADGBQ8N7X0 1667 aa7.63□□□□□ -1.19
CCNT1-204ENST00000551989 WDR62O43379 1518 aa7.63□□□□□ -1.19
CCNT1-204ENST00000551989 POTEJP0CG39 1038 aa7.63□□□□□ -1.19
CCNT1-204ENST00000551989 C7P10643 843 aa7.63□□□□□ -1.19
CCNT1-204ENST00000551989 NAIPQ13075 1403 aa7.62□□□□□ -1.19
CCNT1-204ENST00000551989 TONSLQ96HA7 1378 aa7.62□□□□□ -1.19
CCNT1-204ENST00000551989 FAM50AQ14320 339 aaKnown RBP7.62□□□□□ -1.19
CCNT1-204ENST00000551989 SLC39A7Q92504 469 aa7.62□□□□□ -1.19
CCNT1-204ENST00000551989 TSPYL2Q9H2G4 693 aaPredicted RBP7.62□□□□□ -1.19
CCNT1-204ENST00000551989 METRNQ9UJH8 293 aa7.62□□□□□ -1.19
CCNT1-204ENST00000551989 DNMT1P26358 1616 aaKnown RBP7.61□□□□□ -1.19
CCNT1-204ENST00000551989 ADCY10Q96PN6 1610 aa7.61□□□□□ -1.19
CCNT1-204ENST00000551989 MRC2Q9UBG0 1479 aa7.61□□□□□ -1.19
CCNT1-204ENST00000551989 PPP1R15AO75807 674 aaPredicted RBP7.6□□□□□ -1.19
CCNT1-204ENST00000551989 RTN4Q9NQC3 1192 aaKnown RBP7.6□□□□□ -1.19
CCNT1-204ENST00000551989 CROCC2H7BZ55 1655 aa7.6□□□□□ -1.19
CCNT1-204ENST00000551989 KIAA0556O60303 1618 aa7.6□□□□□ -1.19
CCNT1-204ENST00000551989 EPRSP07814 1512 aaKnown RBP7.59□□□□□ -1.19
CCNT1-204ENST00000551989 ITGAEP38570 1179 aa7.59□□□□□ -1.19
CCNT1-204ENST00000551989 ATN1P54259 1190 aaPredicted RBP7.59□□□□□ -1.19
CCNT1-204ENST00000551989 RASEFQ8IZ41 740 aa7.59□□□□□ -1.19
CCNT1-204ENST00000551989 RAPGEF6Q8TEU7 1601 aa7.59□□□□□ -1.19
CCNT1-204ENST00000551989 ROCK1Q13464 1354 aa7.59□□□□□ -1.2
CCNT1-204ENST00000551989 IFT140Q96RY7 1462 aa7.58□□□□□ -1.2
CCNT1-204ENST00000551989 MAGI3Q5TCQ9 1506 aa7.57□□□□□ -1.2
CCNT1-204ENST00000551989 KDM5BQ9UGL1 1544 aa7.57□□□□□ -1.2
CCNT1-204ENST00000551989 POTEFA5A3E0 1075 aa7.57□□□□□ -1.2
CCNT1-204ENST00000551989 TRPC6Q9Y210 931 aa7.57□□□□□ -1.2
CCNT1-204ENST00000551989 SUPT16HQ9Y5B9 1047 aaKnown RBP7.57□□□□□ -1.2
CCNT1-204ENST00000551989 MAP3K13O43283 966 aa7.56□□□□□ -1.2
CCNT1-204ENST00000551989 ANP32CO43423 234 aa7.56□□□□□ -1.2
CCNT1-204ENST00000551989 BMP2KQ9NSY1 1161 aaPredicted RBP7.56□□□□□ -1.2
CCNT1-204ENST00000551989 KIAA0586Q9BVV6 1533 aa7.56□□□□□ -1.2
CCNT1-204ENST00000551989 PTPRKQ15262 1439 aa7.55□□□□□ -1.2
CCNT1-204ENST00000551989 TIE1P35590 1138 aa7.55□□□□□ -1.2
CCNT1-204ENST00000551989 TDRD9Q8NDG6 1382 aaKnown RBP7.54□□□□□ -1.2
CCNT1-204ENST00000551989 POTEMA6NI47 508 aa7.53□□□□□ -1.2
CCNT1-204ENST00000551989 PLEKHG5O94827 1062 aa7.53□□□□□ -1.2
CCNT1-204ENST00000551989 NEFLP07196 543 aa7.53□□□□□ -1.2
CCNT1-204ENST00000551989 MAMSTRQ6ZN01 415 aa7.53□□□□□ -1.2
CCNT1-204ENST00000551989 P3H3Q8IVL6 736 aa7.53□□□□□ -1.2
CCNT1-204ENST00000551989 MAGI1Q96QZ7 1491 aaPredicted RBP7.53□□□□□ -1.2
CCNT1-204ENST00000551989 EIF4G3O43432 1585 aaKnown RBP7.53□□□□□ -1.2
CCNT1-204ENST00000551989 ADGRL2O95490 1459 aa7.52□□□□□ -1.21
CCNT1-204ENST00000551989 NUBP1P53384 320 aa7.52□□□□□ -1.21
CCNT1-204ENST00000551989 SIN3AQ96ST3 1273 aa7.52□□□□□ -1.21
CCNT1-204ENST00000551989 SGIP1Q9BQI5 828 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms