RNA–Protein interactions for RNA: ENST00000551873.5

CNOT2-234, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-234ENST00000551873 KIAA0556O60303 1618 aa12.51□□□□□ -0.41
CNOT2-234ENST00000551873 PHLDB1Q86UU1 1377 aa12.51□□□□□ -0.41
CNOT2-234ENST00000551873 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
CNOT2-234ENST00000551873 ARHGEF12Q9NZN5 1544 aa12.5□□□□□ -0.41
CNOT2-234ENST00000551873 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
CNOT2-234ENST00000551873 RICTORQ6R327 1708 aa12.48□□□□□ -0.41
CNOT2-234ENST00000551873 TOM1O60784 492 aa12.47□□□□□ -0.41
CNOT2-234ENST00000551873 DISP1Q96F81 1524 aa12.47□□□□□ -0.41
CNOT2-234ENST00000551873 NEO1Q92859 1461 aa12.45□□□□□ -0.42
CNOT2-234ENST00000551873 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
CNOT2-234ENST00000551873 CAMSAP1Q5T5Y3 1602 aa12.44□□□□□ -0.42
CNOT2-234ENST00000551873 ABCA9Q8IUA7 1624 aa12.42□□□□□ -0.42
CNOT2-234ENST00000551873 BIVM-ERCC5R4GMW8 1640 aa12.42□□□□□ -0.42
CNOT2-234ENST00000551873 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
CNOT2-234ENST00000551873 C3P01024 1663 aa12.4□□□□□ -0.42
CNOT2-234ENST00000551873 ZFYVE16Q7Z3T8 1539 aa12.4□□□□□ -0.42
CNOT2-234ENST00000551873 NCKAP5LQ9HCH0 1330 aa12.39□□□□□ -0.43
CNOT2-234ENST00000551873 IQGAP2Q13576 1575 aa12.39□□□□□ -0.43
CNOT2-234ENST00000551873 ZMYM4Q5VZL5 1548 aa12.38□□□□□ -0.43
CNOT2-234ENST00000551873 EFCAB5A4FU69 1503 aa12.37□□□□□ -0.43
CNOT2-234ENST00000551873 FHOD3Q2V2M9 1422 aa12.36□□□□□ -0.43
CNOT2-234ENST00000551873 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
CNOT2-234ENST00000551873 PTPRKQ15262 1439 aa12.33□□□□□ -0.44
CNOT2-234ENST00000551873 CPS1P31327 1500 aa12.32□□□□□ -0.44
CNOT2-234ENST00000551873 SETBP1Q9Y6X0 1596 aa12.32□□□□□ -0.44
CNOT2-234ENST00000551873 HOXD11P31277 338 aaPredicted RBP12.31□□□□□ -0.44
CNOT2-234ENST00000551873 TRAPPC8Q9Y2L5 1435 aa12.3□□□□□ -0.44
CNOT2-234ENST00000551873 ABCA8O94911 1581 aa12.29□□□□□ -0.44
CNOT2-234ENST00000551873 TCOF1Q13428 1488 aaKnown RBP12.28□□□□□ -0.44
CNOT2-234ENST00000551873 HECW1Q76N89 1606 aa12.28□□□□□ -0.44
CNOT2-234ENST00000551873 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.44
CNOT2-234ENST00000551873 SUPT6HQ7KZ85 1726 aaKnown RBP12.27□□□□□ -0.45
CNOT2-234ENST00000551873 PLA2R1Q13018 1463 aa12.26□□□□□ -0.45
CNOT2-234ENST00000551873 IGF1RP08069 1367 aa12.25□□□□□ -0.45
CNOT2-234ENST00000551873 SHANK2Q9UPX8 1470 aa12.25□□□□□ -0.45
CNOT2-234ENST00000551873 UGGT2Q9NYU1 1516 aa12.25□□□□□ -0.45
CNOT2-234ENST00000551873 PKD2Q13563 968 aa12.24□□□□□ -0.45
CNOT2-234ENST00000551873 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
CNOT2-234ENST00000551873 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
CNOT2-234ENST00000551873 RAPGEF2Q9Y4G8 1499 aa12.23□□□□□ -0.45
CNOT2-234ENST00000551873 C9orf84Q5VXU9 1444 aa12.23□□□□□ -0.45
CNOT2-234ENST00000551873 TRIM52Q96A61 297 aa12.23□□□□□ -0.45
CNOT2-234ENST00000551873 CEP350Q5VT06 3117 aa12.23□□□□□ -0.45
CNOT2-234ENST00000551873 LRRC7Q96NW7 1537 aa12.22□□□□□ -0.45
CNOT2-234ENST00000551873 ATP10AO60312 1499 aa12.22□□□□□ -0.45
CNOT2-234ENST00000551873 ZNF142P52746 1687 aaPredicted RBP12.22□□□□□ -0.45
CNOT2-234ENST00000551873 RNF17Q9BXT8 1623 aaKnown RBP12.19□□□□□ -0.46
CNOT2-234ENST00000551873 EP400Q96L91 3159 aa12.19□□□□□ -0.46
CNOT2-234ENST00000551873 VWDEQ8N2E2 1590 aa12.18□□□□□ -0.46
CNOT2-234ENST00000551873 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
CNOT2-234ENST00000551873 CFAP74Q9C0B2 1584 aa12.17□□□□□ -0.46
CNOT2-234ENST00000551873 MYO3AQ8NEV4 1616 aa12.16□□□□□ -0.46
CNOT2-234ENST00000551873 ARID3CA6NKF2 412 aa12.16□□□□□ -0.46
CNOT2-234ENST00000551873 ATP10BO94823 1461 aa12.15□□□□□ -0.46
CNOT2-234ENST00000551873 POLR1AO95602 1720 aaPredicted RBP12.14□□□□□ -0.47
CNOT2-234ENST00000551873 NEURL4Q96JN8 1562 aa12.14□□□□□ -0.47
CNOT2-234ENST00000551873 STRCP1A6NGW2 1772 aa12.14□□□□□ -0.47
CNOT2-234ENST00000551873 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
CNOT2-234ENST00000551873 NPATQ14207 1427 aa12.13□□□□□ -0.47
CNOT2-234ENST00000551873 LRP5O75197 1615 aa12.13□□□□□ -0.47
CNOT2-234ENST00000551873 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
CNOT2-234ENST00000551873 CARMIL1Q5VZK9 1371 aa12.1□□□□□ -0.47
CNOT2-234ENST00000551873 ZBTB22O15209 634 aa12.1□□□□□ -0.47
CNOT2-234ENST00000551873 CDK12Q9NYV4 1490 aaPredicted RBP12.09□□□□□ -0.47
CNOT2-234ENST00000551873 AGLP35573 1532 aa12.07□□□□□ -0.48
CNOT2-234ENST00000551873 MROH2AA6NES4 1674 aa12.07□□□□□ -0.48
CNOT2-234ENST00000551873 POTEDQ86YR6 584 aa12.06□□□□□ -0.48
CNOT2-234ENST00000551873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.48
CNOT2-234ENST00000551873 SYNMO15061 1565 aa12.05□□□□□ -0.48
CNOT2-234ENST00000551873 REREQ9P2R6 1566 aa12.05□□□□□ -0.48
CNOT2-234ENST00000551873 YY1P25490 414 aa12.04□□□□□ -0.48
CNOT2-234ENST00000551873 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
CNOT2-234ENST00000551873 FOXD4L1Q9NU39 408 aa12.04□□□□□ -0.48
CNOT2-234ENST00000551873 DIP2CQ9Y2E4 1556 aa12.04□□□□□ -0.48
CNOT2-234ENST00000551873 XIRP1Q702N8 1843 aaKnown RBP12.04□□□□□ -0.48
CNOT2-234ENST00000551873 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
CNOT2-234ENST00000551873 SCAPERQ9BY12 1400 aa12.03□□□□□ -0.48
CNOT2-234ENST00000551873 CNTLNQ9NXG0 1405 aa12.03□□□□□ -0.48
CNOT2-234ENST00000551873 RXRBP28702 533 aa12.03□□□□□ -0.48
CNOT2-234ENST00000551873 ZNF772Q68DY9 489 aaPredicted RBP12.03□□□□□ -0.48
CNOT2-234ENST00000551873 LRP6O75581 1613 aa12.03□□□□□ -0.48
CNOT2-234ENST00000551873 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
CNOT2-234ENST00000551873 DNMT1P26358 1616 aaKnown RBP12.02□□□□□ -0.49
CNOT2-234ENST00000551873 SENP3-EIF4A1A0A087X0R7 540 aa12.01□□□□□ -0.49
CNOT2-234ENST00000551873 RGS12O14924 1447 aa12.01□□□□□ -0.49
CNOT2-234ENST00000551873 ROBO1Q9Y6N7 1651 aa12□□□□□ -0.49
CNOT2-234ENST00000551873 CDK13Q14004 1512 aaKnown RBP11.99□□□□□ -0.49
CNOT2-234ENST00000551873 ABCA6Q8N139 1617 aa11.99□□□□□ -0.49
CNOT2-234ENST00000551873 ZMYM3Q14202 1370 aa11.98□□□□□ -0.49
CNOT2-234ENST00000551873 A2ML1A8K2U0 1454 aa11.95□□□□□ -0.5
CNOT2-234ENST00000551873 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
CNOT2-234ENST00000551873 KDM5CP41229 1560 aa11.95□□□□□ -0.5
CNOT2-234ENST00000551873 PHLPP1O60346 1717 aa11.94□□□□□ -0.5
CNOT2-234ENST00000551873 JCADQ9P266 1359 aa11.94□□□□□ -0.5
CNOT2-234ENST00000551873 NUTM2BA6NNL0 878 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-234ENST00000551873 NUTM2EB1AL46 878 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-234ENST00000551873 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
CNOT2-234ENST00000551873 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-234ENST00000551873 NUTM2AQ8IVF1 878 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-234ENST00000551873 CLTCQ00610 1675 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms