RNA–Protein interactions for RNA: ENST00000551710.1

CNOT2-233, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-233ENST00000551710 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
CNOT2-233ENST00000551710 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
CNOT2-233ENST00000551710 NLRP6P59044 892 aa10.63□□□□□ -0.71
CNOT2-233ENST00000551710 ECM2O94769 699 aaPredicted RBP10.62□□□□□ -0.71
CNOT2-233ENST00000551710 STK25O00506 426 aa10.6□□□□□ -0.71
CNOT2-233ENST00000551710 VARS2Q5ST30 1063 aaKnown RBP10.58□□□□□ -0.72
CNOT2-233ENST00000551710 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
CNOT2-233ENST00000551710 FBXO22Q8NEZ5 403 aa10.54□□□□□ -0.72
CNOT2-233ENST00000551710 MFRPQ9BY79 579 aa10.53□□□□□ -0.72
CNOT2-233ENST00000551710 ARSIQ5FYB1 569 aa10.52□□□□□ -0.73
CNOT2-233ENST00000551710 GPR153Q6NV75 609 aa10.52□□□□□ -0.73
CNOT2-233ENST00000551710 RGL2O15211 777 aa10.5□□□□□ -0.73
CNOT2-233ENST00000551710 ZNF687Q8N1G0 1237 aa10.48□□□□□ -0.73
CNOT2-233ENST00000551710 PKD2Q13563 968 aa10.47□□□□□ -0.73
CNOT2-233ENST00000551710 KHSRPQ92945 711 aaKnown RBP eCLIP10.47□□□□□ -0.73
CNOT2-233ENST00000551710 C2orf72A6NCS6 295 aa10.45□□□□□ -0.74
CNOT2-233ENST00000551710 ZNF316A6NFI3 1004 aaPredicted RBP10.42□□□□□ -0.74
CNOT2-233ENST00000551710 ANKRD13DQ6ZTN6 518 aa10.42□□□□□ -0.74
CNOT2-233ENST00000551710 TMC2Q8TDI7 906 aa10.42□□□□□ -0.74
CNOT2-233ENST00000551710 RNF166Q96A37 237 aaPredicted RBP10.42□□□□□ -0.74
CNOT2-233ENST00000551710 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
CNOT2-233ENST00000551710 KIF3CO14782 793 aa10.39□□□□□ -0.75
CNOT2-233ENST00000551710 NUDT7P0C024 238 aa10.39□□□□□ -0.75
CNOT2-233ENST00000551710 PPP1R37O75864 691 aa10.36□□□□□ -0.75
CNOT2-233ENST00000551710 PCDHGA4Q9Y5G9 962 aa10.34□□□□□ -0.75
CNOT2-233ENST00000551710 LHX6Q9UPM6 363 aa10.32□□□□□ -0.76
CNOT2-233ENST00000551710 PTGER2P43116 358 aa10.3□□□□□ -0.76
CNOT2-233ENST00000551710 LSM11P83369 360 aaKnown RBP eCLIP10.3□□□□□ -0.76
CNOT2-233ENST00000551710 SLC34A2O95436 690 aa10.29□□□□□ -0.76
CNOT2-233ENST00000551710 AXIN2Q9Y2T1 843 aa10.29□□□□□ -0.76
CNOT2-233ENST00000551710 CHGAP10645 457 aaKnown RBP10.27□□□□□ -0.77
CNOT2-233ENST00000551710 PBX2P40425 430 aa10.25□□□□□ -0.77
CNOT2-233ENST00000551710 HS6ST3Q8IZP7 471 aa10.24□□□□□ -0.77
CNOT2-233ENST00000551710 PLPP6Q8IY26 295 aa10.23□□□□□ -0.77
CNOT2-233ENST00000551710 POTEEQ6S8J3 1075 aa10.21□□□□□ -0.77
CNOT2-233ENST00000551710 FOXK1P85037 733 aa10.2□□□□□ -0.78
CNOT2-233ENST00000551710 GPHNQ9NQX3 736 aaPredicted RBP10.2□□□□□ -0.78
CNOT2-233ENST00000551710 PSDA5PKW4 1024 aaPredicted RBP10.19□□□□□ -0.78
CNOT2-233ENST00000551710 ARHGAP33O14559 1287 aa10.19□□□□□ -0.78
CNOT2-233ENST00000551710 TBC1D12O60347 775 aa10.19□□□□□ -0.78
CNOT2-233ENST00000551710 PTCD2Q8WV60 388 aaKnown RBP10.19□□□□□ -0.78
CNOT2-233ENST00000551710 DSG2Q14126 1118 aa10.18□□□□□ -0.78
CNOT2-233ENST00000551710 ADGRD1Q6QNK2 874 aa10.14□□□□□ -0.79
CNOT2-233ENST00000551710 PSEN2P49810 448 aa10.13□□□□□ -0.79
CNOT2-233ENST00000551710 PPP4R3BQ5MIZ7 849 aa10.13□□□□□ -0.79
CNOT2-233ENST00000551710 KDM4FA0A1W2PPD8 638 aa10.12□□□□□ -0.79
CNOT2-233ENST00000551710 STAC3Q96MF2 364 aa10.12□□□□□ -0.79
CNOT2-233ENST00000551710 RYDENQ9NUL5 291 aaKnown RBP10.12□□□□□ -0.79
CNOT2-233ENST00000551710 NKX1-1Q15270 411 aaPredicted RBP10.11□□□□□ -0.79
CNOT2-233ENST00000551710 UPF1Q92900 1129 aaKnown RBP eCLIP10.11□□□□□ -0.79
CNOT2-233ENST00000551710 DMRTA1Q5VZB9 504 aa10.1□□□□□ -0.79
CNOT2-233ENST00000551710 KCNH8Q96L42 1107 aa10.09□□□□□ -0.79
CNOT2-233ENST00000551710 HCSTQ9UBK5 93 aa10.09□□□□□ -0.79
CNOT2-233ENST00000551710 TK2O00142 265 aa10.06□□□□□ -0.8
CNOT2-233ENST00000551710 KCNK17Q96T54 332 aa10.06□□□□□ -0.8
CNOT2-233ENST00000551710 PLA2G2EQ9NZK7 142 aa10.05□□□□□ -0.8
CNOT2-233ENST00000551710 DCAF8L2P0C7V8 631 aa10.04□□□□□ -0.8
CNOT2-233ENST00000551710 PDE4AP27815 886 aa10.04□□□□□ -0.8
CNOT2-233ENST00000551710 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
CNOT2-233ENST00000551710 ZNF454Q8N9F8 522 aa10.04□□□□□ -0.8
CNOT2-233ENST00000551710 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
CNOT2-233ENST00000551710 KCTD12Q96CX2 325 aaKnown RBP10.04□□□□□ -0.8
CNOT2-233ENST00000551710 DNAJC5Q9H3Z4 198 aa10.03□□□□□ -0.8
CNOT2-233ENST00000551710 HRO43593 1189 aa10.02□□□□□ -0.81
CNOT2-233ENST00000551710 CRISPLD2Q9H0B8 497 aa10.02□□□□□ -0.81
CNOT2-233ENST00000551710 LARP6Q9BRS8 491 aaKnown RBP9.99□□□□□ -0.81
CNOT2-233ENST00000551710 NCKAP5LQ9HCH0 1330 aa9.98□□□□□ -0.81
CNOT2-233ENST00000551710 VPS9D1Q9Y2B5 631 aa9.97□□□□□ -0.81
CNOT2-233ENST00000551710 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.82
CNOT2-233ENST00000551710 EVI5O60447 810 aa9.95□□□□□ -0.82
CNOT2-233ENST00000551710 PTPREP23469 700 aa9.95□□□□□ -0.82
CNOT2-233ENST00000551710 PTPN5P54829 565 aa9.95□□□□□ -0.82
CNOT2-233ENST00000551710 MAP3K9P80192 1104 aa9.94□□□□□ -0.82
CNOT2-233ENST00000551710 DDX27Q96GQ7 796 aaKnown RBP9.94□□□□□ -0.82
CNOT2-233ENST00000551710 BCL2L12Q9HB09 334 aa9.94□□□□□ -0.82
CNOT2-233ENST00000551710 GOLGA8CPA6NN73 597 aa9.93□□□□□ -0.82
CNOT2-233ENST00000551710 FOSBP53539 338 aa9.93□□□□□ -0.82
CNOT2-233ENST00000551710 ZDHHC16Q969W1 377 aa9.9□□□□□ -0.82
CNOT2-233ENST00000551710 ANO8Q9HCE9 1232 aaPredicted RBP9.9□□□□□ -0.82
CNOT2-233ENST00000551710 MRPL50Q8N5N7 158 aaKnown RBP9.88□□□□□ -0.83
CNOT2-233ENST00000551710 JPH4Q96JJ6 628 aa9.88□□□□□ -0.83
CNOT2-233ENST00000551710 ADAM33Q9BZ11 813 aa9.88□□□□□ -0.83
CNOT2-233ENST00000551710 SLC4A5Q9BY07 1137 aa9.87□□□□□ -0.83
CNOT2-233ENST00000551710 WNT2BQ93097 391 aa9.86□□□□□ -0.83
CNOT2-233ENST00000551710 ZBED2Q9BTP6 218 aa9.86□□□□□ -0.83
CNOT2-233ENST00000551710 BHMG1C9JSJ3 638 aaPredicted RBP9.84□□□□□ -0.83
CNOT2-233ENST00000551710 MFSD10Q14728 455 aa9.83□□□□□ -0.84
CNOT2-233ENST00000551710 NBPF3Q9H094 633 aa9.83□□□□□ -0.84
CNOT2-233ENST00000551710 EMILIN3Q9NT22 766 aa9.83□□□□□ -0.84
CNOT2-233ENST00000551710 THSD4Q6ZMP0 1018 aa9.82□□□□□ -0.84
CNOT2-233ENST00000551710 CADPS2Q86UW7 1296 aa9.8□□□□□ -0.84
CNOT2-233ENST00000551710 PCDHGA10Q9Y5H3 936 aa9.8□□□□□ -0.84
CNOT2-233ENST00000551710 PROX2Q3B8N5 592 aa9.77□□□□□ -0.85
CNOT2-233ENST00000551710 TYW1BQ6NUM6 668 aa9.77□□□□□ -0.85
CNOT2-233ENST00000551710 PPP1R3GB7ZBB8 358 aa9.76□□□□□ -0.85
CNOT2-233ENST00000551710 FBXW7Q969H0 707 aa9.76□□□□□ -0.85
CNOT2-233ENST00000551710 PHF14O94880 888 aa9.75□□□□□ -0.85
CNOT2-233ENST00000551710 COL9A1P20849 921 aa9.75□□□□□ -0.85
CNOT2-233ENST00000551710 RABGEF1Q9UJ41 708 aa9.75□□□□□ -0.85
CNOT2-233ENST00000551710 DPYSL4O14531 572 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms