RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 RAPGEF3O95398 923 aa23.71■■□□□ 1.39
SMARCD1-211ENST00000551497 CDC42BPBQ9Y5S2 1711 aa23.7■■□□□ 1.38
SMARCD1-211ENST00000551497 ARHGAP5Q13017 1502 aa23.69■■□□□ 1.38
SMARCD1-211ENST00000551497 ARAP3Q8WWN8 1544 aa23.69■■□□□ 1.38
SMARCD1-211ENST00000551497 NCOA2Q15596 1464 aa23.69■■□□□ 1.38
SMARCD1-211ENST00000551497 ZNF777Q9ULD5 760 aaPredicted RBP23.69■■□□□ 1.38
SMARCD1-211ENST00000551497 CDC42BPAQ5VT25 1732 aa23.69■■□□□ 1.38
SMARCD1-211ENST00000551497 CFDP1Q9UEE9 299 aaPredicted RBP23.68■■□□□ 1.38
SMARCD1-211ENST00000551497 PPARGC1BQ86YN6 1023 aaKnown RBP23.67■■□□□ 1.38
SMARCD1-211ENST00000551497 SUPT6HQ7KZ85 1726 aaKnown RBP23.66■■□□□ 1.38
SMARCD1-211ENST00000551497 PREX2Q70Z35 1606 aa23.65■■□□□ 1.38
SMARCD1-211ENST00000551497 SCAPERQ9BY12 1400 aa23.64■■□□□ 1.37
SMARCD1-211ENST00000551497 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
SMARCD1-211ENST00000551497 ZNF644Q9H582 1327 aaPredicted RBP23.62■■□□□ 1.37
SMARCD1-211ENST00000551497 CFAP74Q9C0B2 1584 aa23.62■■□□□ 1.37
SMARCD1-211ENST00000551497 DENND4BO75064 1496 aaPredicted RBP23.61■■□□□ 1.37
SMARCD1-211ENST00000551497 HNRNPMP52272 730 aaKnown RBP eCLIP23.58■■□□□ 1.37
SMARCD1-211ENST00000551497 AFAP1Q8N556 730 aa23.58■■□□□ 1.37
SMARCD1-211ENST00000551497 ARHGEF12Q9NZN5 1544 aa23.57■■□□□ 1.36
SMARCD1-211ENST00000551497 SAMD9LQ8IVG5 1584 aa23.55■■□□□ 1.36
SMARCD1-211ENST00000551497 FRMPD1Q5SYB0 1578 aa23.54■■□□□ 1.36
SMARCD1-211ENST00000551497 TRAPPC8Q9Y2L5 1435 aa23.52■■□□□ 1.36
SMARCD1-211ENST00000551497 ITSN2Q9NZM3 1697 aa23.52■■□□□ 1.36
SMARCD1-211ENST00000551497 RICTORQ6R327 1708 aa23.52■■□□□ 1.36
SMARCD1-211ENST00000551497 MYOM3Q5VTT5 1437 aa23.51■■□□□ 1.35
SMARCD1-211ENST00000551497 POGZQ7Z3K3 1410 aa23.51■■□□□ 1.35
SMARCD1-211ENST00000551497 ABCC1P33527 1531 aa23.51■■□□□ 1.35
SMARCD1-211ENST00000551497 KIAA1107Q9UPP5 1409 aa23.48■■□□□ 1.35
SMARCD1-211ENST00000551497 SYCP2Q9BX26 1530 aa23.47■■□□□ 1.35
SMARCD1-211ENST00000551497 PLEKHH2Q8IVE3 1493 aa23.46■■□□□ 1.35
SMARCD1-211ENST00000551497 ZNF518AQ6AHZ1 1483 aa23.45■■□□□ 1.34
SMARCD1-211ENST00000551497 MIA2Q96PC5 1412 aa23.45■■□□□ 1.34
SMARCD1-211ENST00000551497 MYT1LQ9UL68 1186 aa23.45■■□□□ 1.34
SMARCD1-211ENST00000551497 CAMSAP2Q08AD1 1489 aa23.44■■□□□ 1.34
SMARCD1-211ENST00000551497 MBD5Q9P267 1494 aa23.43■■□□□ 1.34
SMARCD1-211ENST00000551497 YEATS2Q9ULM3 1422 aa23.42■■□□□ 1.34
SMARCD1-211ENST00000551497 ZMYM4Q5VZL5 1548 aa23.41■■□□□ 1.34
SMARCD1-211ENST00000551497 FGD6Q6ZV73 1430 aa23.4■■□□□ 1.34
SMARCD1-211ENST00000551497 KDM5CP41229 1560 aa23.4■■□□□ 1.34
SMARCD1-211ENST00000551497 SPAG9O60271 1321 aaKnown RBP23.39■■□□□ 1.34
SMARCD1-211ENST00000551497 MAGI2Q86UL8 1455 aa23.38■■□□□ 1.33
SMARCD1-211ENST00000551497 RSPH4AQ5TD94 716 aa23.37■■□□□ 1.33
SMARCD1-211ENST00000551497 ZFYVE16Q7Z3T8 1539 aa23.37■■□□□ 1.33
SMARCD1-211ENST00000551497 MLH3Q9UHC1 1453 aa23.36■■□□□ 1.33
SMARCD1-211ENST00000551497 PTPN23Q9H3S7 1636 aa23.36■■□□□ 1.33
SMARCD1-211ENST00000551497 FAM50AQ14320 339 aaKnown RBP23.35■■□□□ 1.33
SMARCD1-211ENST00000551497 HECW2Q9P2P5 1572 aa23.32■■□□□ 1.32
SMARCD1-211ENST00000551497 KIDINS220Q9ULH0 1771 aa23.32■■□□□ 1.32
SMARCD1-211ENST00000551497 ATP10AO60312 1499 aa23.31■■□□□ 1.32
SMARCD1-211ENST00000551497 TCOF1Q13428 1488 aaKnown RBP23.31■■□□□ 1.32
SMARCD1-211ENST00000551497 CCDC141Q6ZP82 1450 aa23.31■■□□□ 1.32
SMARCD1-211ENST00000551497 KDM4FA0A1W2PPD8 638 aa23.31■■□□□ 1.32
SMARCD1-211ENST00000551497 TSPY4P0CV99 314 aa23.31■■□□□ 1.32
SMARCD1-211ENST00000551497 TSPY10P0CW01 314 aa23.31■■□□□ 1.32
SMARCD1-211ENST00000551497 ARHGEF40Q8TER5 1519 aa23.31■■□□□ 1.32
SMARCD1-211ENST00000551497 ARID4BQ4LE39 1312 aaPredicted RBP23.31■■□□□ 1.32
SMARCD1-211ENST00000551497 ARHGEF5Q12774 1597 aa23.3■■□□□ 1.32
SMARCD1-211ENST00000551497 ABCC5O15440 1437 aa23.27■■□□□ 1.32
SMARCD1-211ENST00000551497 ATP7AQ04656 1500 aa23.27■■□□□ 1.32
SMARCD1-211ENST00000551497 DIP2CQ9Y2E4 1556 aa23.27■■□□□ 1.32
SMARCD1-211ENST00000551497 ABCA6Q8N139 1617 aa23.26■■□□□ 1.31
SMARCD1-211ENST00000551497 SIGLEC1Q9BZZ2 1709 aa23.25■■□□□ 1.31
SMARCD1-211ENST00000551497 RTEL1-TNFRSF6BF6WH68 1400 aa23.25■■□□□ 1.31
SMARCD1-211ENST00000551497 C9orf84Q5VXU9 1444 aa23.25■■□□□ 1.31
SMARCD1-211ENST00000551497 INO80Q9ULG1 1556 aaPredicted RBP23.24■■□□□ 1.31
SMARCD1-211ENST00000551497 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
SMARCD1-211ENST00000551497 DAPK1P53355 1430 aa23.23■■□□□ 1.31
SMARCD1-211ENST00000551497 MLECQ14165 292 aa23.22■■□□□ 1.31
SMARCD1-211ENST00000551497 ITGAEP38570 1179 aa23.2■■□□□ 1.3
SMARCD1-211ENST00000551497 DNMT1P26358 1616 aaKnown RBP23.19■■□□□ 1.3
SMARCD1-211ENST00000551497 A2MP01023 1474 aa23.17■■□□□ 1.3
SMARCD1-211ENST00000551497 RRP7BPQ9NSQ0 103 aa23.17■■□□□ 1.3
SMARCD1-211ENST00000551497 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
SMARCD1-211ENST00000551497 MAST1Q9Y2H9 1570 aa23.16■■□□□ 1.3
SMARCD1-211ENST00000551497 PTPRKQ15262 1439 aa23.16■■□□□ 1.3
SMARCD1-211ENST00000551497 DHX29Q7Z478 1369 aaKnown RBP23.14■■□□□ 1.3
SMARCD1-211ENST00000551497 REREQ9P2R6 1566 aa23.14■■□□□ 1.3
SMARCD1-211ENST00000551497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.14■■□□□ 1.297e-6■■■□□ 16.5
SMARCD1-211ENST00000551497 CROCC2H7BZ55 1655 aa23.13■■□□□ 1.29
SMARCD1-211ENST00000551497 SHANK2Q9UPX8 1470 aa23.12■■□□□ 1.29
SMARCD1-211ENST00000551497 BCORL1Q5H9F3 1711 aa23.12■■□□□ 1.29
SMARCD1-211ENST00000551497 ADGBQ8N7X0 1667 aa23.11■■□□□ 1.29
SMARCD1-211ENST00000551497 AGLP35573 1532 aa23.11■■□□□ 1.29
SMARCD1-211ENST00000551497 KIF3BO15066 747 aa23.09■■□□□ 1.29
SMARCD1-211ENST00000551497 ADAMTSL3P82987 1691 aa23.09■■□□□ 1.29
SMARCD1-211ENST00000551497 NCOA1Q15788 1441 aa23.08■■□□□ 1.29
SMARCD1-211ENST00000551497 GGT6Q6P531 493 aa23.08■■□□□ 1.29
SMARCD1-211ENST00000551497 ANKRD30AQ9BXX3 1397 aa23.08■■□□□ 1.29
SMARCD1-211ENST00000551497 PLXNC1O60486 1568 aa23.08■■□□□ 1.29
SMARCD1-211ENST00000551497 KIF15Q9NS87 1388 aa23.07■■□□□ 1.28
SMARCD1-211ENST00000551497 MADDQ8WXG6 1647 aa23.03■■□□□ 1.28
SMARCD1-211ENST00000551497 ADGRL2O95490 1459 aa23.03■■□□□ 1.28
SMARCD1-211ENST00000551497 DUOX2Q9NRD8 1548 aa23.02■■□□□ 1.28
SMARCD1-211ENST00000551497 PLPPR3Q6T4P5 718 aa23.01■■□□□ 1.27
SMARCD1-211ENST00000551497 ROCK1Q13464 1354 aa22.99■■□□□ 1.27
SMARCD1-211ENST00000551497 CEBPAP49715 358 aaPredicted RBP22.98■■□□□ 1.27
SMARCD1-211ENST00000551497 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
SMARCD1-211ENST00000551497 RIMS1Q86UR5 1692 aaKnown RBP22.97■■□□□ 1.27
SMARCD1-211ENST00000551497 PTPRMP28827 1452 aa22.97■■□□□ 1.27
SMARCD1-211ENST00000551497 FER1L4A9Z1Z3 1794 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms