RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CDC42BPBQ9Y5S2 1711 aa16.9■□□□□ 0.3
RAB5C-208ENST00000551338 ABCC5O15440 1437 aa16.9■□□□□ 0.3
RAB5C-208ENST00000551338 ZCCHC11Q5TAX3 1644 aaKnown RBP16.88■□□□□ 0.29
RAB5C-208ENST00000551338 ROCK1Q13464 1354 aa16.86■□□□□ 0.29
RAB5C-208ENST00000551338 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
RAB5C-208ENST00000551338 TTC37Q6PGP7 1564 aa16.85■□□□□ 0.29
RAB5C-208ENST00000551338 MYO5CQ9NQX4 1742 aa16.84■□□□□ 0.29
RAB5C-208ENST00000551338 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.28
RAB5C-208ENST00000551338 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.28
RAB5C-208ENST00000551338 ADGRL2O95490 1459 aa16.83■□□□□ 0.28
RAB5C-208ENST00000551338 RRP7BPQ9NSQ0 103 aa16.83■□□□□ 0.28
RAB5C-208ENST00000551338 CHIC2Q9UKJ5 165 aa16.83■□□□□ 0.28
RAB5C-208ENST00000551338 SAMD9LQ8IVG5 1584 aa16.82■□□□□ 0.28
RAB5C-208ENST00000551338 DENND4BO75064 1496 aaPredicted RBP16.82■□□□□ 0.28
RAB5C-208ENST00000551338 ARHGEF5Q12774 1597 aa16.81■□□□□ 0.28
RAB5C-208ENST00000551338 DIEXFQ68CQ4 756 aaKnown RBP16.81■□□□□ 0.28
RAB5C-208ENST00000551338 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
RAB5C-208ENST00000551338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.8■□□□□ 0.28
RAB5C-208ENST00000551338 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
RAB5C-208ENST00000551338 SIN3AQ96ST3 1273 aa16.79■□□□□ 0.28
RAB5C-208ENST00000551338 KDM5BQ9UGL1 1544 aa16.77■□□□□ 0.28
RAB5C-208ENST00000551338 NCOA1Q15788 1441 aa16.73■□□□□ 0.27
RAB5C-208ENST00000551338 MAST1Q9Y2H9 1570 aa16.72■□□□□ 0.27
RAB5C-208ENST00000551338 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
RAB5C-208ENST00000551338 NEUROD1Q13562 356 aa16.71■□□□□ 0.27
RAB5C-208ENST00000551338 ZNF777Q9ULD5 760 aaPredicted RBP16.71■□□□□ 0.27
RAB5C-208ENST00000551338 MBD5Q9P267 1494 aa16.71■□□□□ 0.27
RAB5C-208ENST00000551338 ARHGAP5Q13017 1502 aa16.7■□□□□ 0.26
RAB5C-208ENST00000551338 SYCP2Q9BX26 1530 aa16.7■□□□□ 0.26
RAB5C-208ENST00000551338 C9orf84Q5VXU9 1444 aa16.7■□□□□ 0.26
RAB5C-208ENST00000551338 PZPP20742 1482 aa16.69■□□□□ 0.26
RAB5C-208ENST00000551338 ACIN1Q9UKV3 1341 aaKnown RBP16.69■□□□□ 0.26
RAB5C-208ENST00000551338 CCDC141Q6ZP82 1450 aa16.68■□□□□ 0.26
RAB5C-208ENST00000551338 ANKRD30AQ9BXX3 1397 aa16.67■□□□□ 0.26
RAB5C-208ENST00000551338 TRIM52Q96A61 297 aa16.67■□□□□ 0.26
RAB5C-208ENST00000551338 KDM5DQ9BY66 1539 aa16.65■□□□□ 0.26
RAB5C-208ENST00000551338 TONSLQ96HA7 1378 aa16.65■□□□□ 0.26
RAB5C-208ENST00000551338 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
RAB5C-208ENST00000551338 MPHOSPH9Q99550 1183 aa16.64■□□□□ 0.25
RAB5C-208ENST00000551338 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
RAB5C-208ENST00000551338 ABCC1P33527 1531 aa16.63■□□□□ 0.25
RAB5C-208ENST00000551338 ANKRD50Q9ULJ7 1429 aa16.62■□□□□ 0.25
RAB5C-208ENST00000551338 PLEKHH2Q8IVE3 1493 aa16.62■□□□□ 0.25
RAB5C-208ENST00000551338 ARAP3Q8WWN8 1544 aa16.62■□□□□ 0.25
RAB5C-208ENST00000551338 ABCA9Q8IUA7 1624 aa16.61■□□□□ 0.25
RAB5C-208ENST00000551338 PLCH2O75038 1416 aa16.6■□□□□ 0.25
RAB5C-208ENST00000551338 WDR7Q9Y4E6 1490 aa16.6■□□□□ 0.25
RAB5C-208ENST00000551338 ARHGEF12Q9NZN5 1544 aa16.6■□□□□ 0.25
RAB5C-208ENST00000551338 UNC13BO14795 1591 aa16.6■□□□□ 0.25
RAB5C-208ENST00000551338 HNRNPMP52272 730 aaKnown RBP eCLIP16.59■□□□□ 0.25
RAB5C-208ENST00000551338 ANKRD30BQ9BXX2 1392 aa16.59■□□□□ 0.25
RAB5C-208ENST00000551338 KIAA1107Q9UPP5 1409 aa16.59■□□□□ 0.25
RAB5C-208ENST00000551338 RPRD2Q5VT52 1461 aaKnown RBP16.58■□□□□ 0.24
RAB5C-208ENST00000551338 TEX14Q8IWB6 1497 aa16.57■□□□□ 0.24
RAB5C-208ENST00000551338 KIF15Q9NS87 1388 aa16.57■□□□□ 0.24
RAB5C-208ENST00000551338 TSPY4P0CV99 314 aa16.54■□□□□ 0.24
RAB5C-208ENST00000551338 TSPY10P0CW01 314 aa16.54■□□□□ 0.24
RAB5C-208ENST00000551338 FOXD1Q16676 465 aa16.54■□□□□ 0.24
RAB5C-208ENST00000551338 RSPH4AQ5TD94 716 aa16.54■□□□□ 0.24
RAB5C-208ENST00000551338 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
RAB5C-208ENST00000551338 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
RAB5C-208ENST00000551338 MIER1Q8N108 512 aa16.52■□□□□ 0.24
RAB5C-208ENST00000551338 SLC4A1APQ9BWU0 796 aaKnown RBP16.52■□□□□ 0.24
RAB5C-208ENST00000551338 IQGAP3Q86VI3 1631 aa16.52■□□□□ 0.23
RAB5C-208ENST00000551338 DUOX2Q9NRD8 1548 aa16.5■□□□□ 0.23
RAB5C-208ENST00000551338 ASXL2Q76L83 1435 aa16.5■□□□□ 0.23
RAB5C-208ENST00000551338 INO80Q9ULG1 1556 aaPredicted RBP16.49■□□□□ 0.23
RAB5C-208ENST00000551338 ZFYVE16Q7Z3T8 1539 aa16.49■□□□□ 0.23
RAB5C-208ENST00000551338 FAM135AQ9P2D6 1515 aa16.49■□□□□ 0.23
RAB5C-208ENST00000551338 MAGI2Q86UL8 1455 aa16.48■□□□□ 0.23
RAB5C-208ENST00000551338 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
RAB5C-208ENST00000551338 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
RAB5C-208ENST00000551338 POLR1AO95602 1720 aaPredicted RBP16.47■□□□□ 0.23
RAB5C-208ENST00000551338 NUP155O75694 1391 aa16.46■□□□□ 0.23
RAB5C-208ENST00000551338 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
RAB5C-208ENST00000551338 L3MBTL2Q969R5 705 aa16.44■□□□□ 0.22
RAB5C-208ENST00000551338 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
RAB5C-208ENST00000551338 FANCAO15360 1455 aa16.43■□□□□ 0.22
RAB5C-208ENST00000551338 PKD2Q13563 968 aa16.43■□□□□ 0.22
RAB5C-208ENST00000551338 DEPDC5O75140 1603 aa16.43■□□□□ 0.22
RAB5C-208ENST00000551338 ATP7AQ04656 1500 aa16.42■□□□□ 0.22
RAB5C-208ENST00000551338 RTEL1-TNFRSF6BF6WH68 1400 aa16.42■□□□□ 0.22
RAB5C-208ENST00000551338 KIDINS220Q9ULH0 1771 aa16.39■□□□□ 0.21
RAB5C-208ENST00000551338 EIF2AK4Q9P2K8 1649 aaKnown RBP16.39■□□□□ 0.21
RAB5C-208ENST00000551338 ADGRL1O94910 1474 aa16.39■□□□□ 0.21
RAB5C-208ENST00000551338 NBPF8Q3BBV2 869 aa16.37■□□□□ 0.21
RAB5C-208ENST00000551338 HIRIP3Q9BW71 556 aaPredicted RBP16.37■□□□□ 0.21
RAB5C-208ENST00000551338 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
RAB5C-208ENST00000551338 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
RAB5C-208ENST00000551338 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
RAB5C-208ENST00000551338 E9PCH4 1651 aa16.37■□□□□ 0.21
RAB5C-208ENST00000551338 TET3O43151 1660 aa16.34■□□□□ 0.21
RAB5C-208ENST00000551338 SCAPERQ9BY12 1400 aa16.34■□□□□ 0.21
RAB5C-208ENST00000551338 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.21
RAB5C-208ENST00000551338 SPAG9O60271 1321 aaKnown RBP16.33■□□□□ 0.2
RAB5C-208ENST00000551338 UHRF1BP1Q6BDS2 1440 aa16.33■□□□□ 0.2
RAB5C-208ENST00000551338 KDM5CP41229 1560 aa16.33■□□□□ 0.2
RAB5C-208ENST00000551338 VWDEQ8N2E2 1590 aa16.33■□□□□ 0.2
RAB5C-208ENST00000551338 MROH1Q8NDA8 1641 aa16.33■□□□□ 0.2
RAB5C-208ENST00000551338 HSPA5P11021 654 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms