RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 POGZQ7Z3K3 1410 aa12.19□□□□□ -0.46
ERBB3-218ENST00000551176 VPS8Q8N3P4 1428 aa12.19□□□□□ -0.46
ERBB3-218ENST00000551176 RICTORQ6R327 1708 aa12.18□□□□□ -0.46
ERBB3-218ENST00000551176 MYO5CQ9NQX4 1742 aa12.18□□□□□ -0.46
ERBB3-218ENST00000551176 GPATCH8Q9UKJ3 1502 aaKnown RBP12.17□□□□□ -0.46
ERBB3-218ENST00000551176 YEATS2Q9ULM3 1422 aa12.17□□□□□ -0.46
ERBB3-218ENST00000551176 MTUS2Q5JR59 1369 aa12.17□□□□□ -0.46
ERBB3-218ENST00000551176 ZMYM4Q5VZL5 1548 aa12.16□□□□□ -0.46
ERBB3-218ENST00000551176 ARHGEF12Q9NZN5 1544 aa12.16□□□□□ -0.46
ERBB3-218ENST00000551176 AFAP1Q8N556 730 aa12.16□□□□□ -0.46
ERBB3-218ENST00000551176 PREX2Q70Z35 1606 aa12.15□□□□□ -0.46
ERBB3-218ENST00000551176 CDC42BPBQ9Y5S2 1711 aa12.15□□□□□ -0.46
ERBB3-218ENST00000551176 ARHGEF40Q8TER5 1519 aa12.14□□□□□ -0.47
ERBB3-218ENST00000551176 TRAPPC8Q9Y2L5 1435 aa12.13□□□□□ -0.47
ERBB3-218ENST00000551176 ABCC1P33527 1531 aa12.13□□□□□ -0.47
ERBB3-218ENST00000551176 EHBP1L1Q8N3D4 1523 aa12.13□□□□□ -0.47
ERBB3-218ENST00000551176 MAGI2Q86UL8 1455 aa12.13□□□□□ -0.47
ERBB3-218ENST00000551176 ZFYVE16Q7Z3T8 1539 aa12.12□□□□□ -0.47
ERBB3-218ENST00000551176 CDC42BPAQ5VT25 1732 aa12.12□□□□□ -0.47
ERBB3-218ENST00000551176 KANK4Q5T7N3 995 aaPredicted RBP12.12□□□□□ -0.47
ERBB3-218ENST00000551176 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
ERBB3-218ENST00000551176 ZNF518AQ6AHZ1 1483 aa12.12□□□□□ -0.47
ERBB3-218ENST00000551176 TIAM1Q13009 1591 aa12.12□□□□□ -0.47
ERBB3-218ENST00000551176 KDM5CP41229 1560 aa12.11□□□□□ -0.47
ERBB3-218ENST00000551176 SAMD9LQ8IVG5 1584 aa12.11□□□□□ -0.47
ERBB3-218ENST00000551176 ZNF777Q9ULD5 760 aaPredicted RBP12.11□□□□□ -0.47
ERBB3-218ENST00000551176 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
ERBB3-218ENST00000551176 CFDP1Q9UEE9 299 aaPredicted RBP12.1□□□□□ -0.47
ERBB3-218ENST00000551176 SIGLEC1Q9BZZ2 1709 aa12.1□□□□□ -0.47
ERBB3-218ENST00000551176 NCOA2Q15596 1464 aa12.09□□□□□ -0.47
ERBB3-218ENST00000551176 LRRC9Q6ZRR7 1453 aa12.09□□□□□ -0.47
ERBB3-218ENST00000551176 HNRNPMP52272 730 aaKnown RBP eCLIP12.09□□□□□ -0.47
ERBB3-218ENST00000551176 ARID4BQ4LE39 1312 aaPredicted RBP12.09□□□□□ -0.47
ERBB3-218ENST00000551176 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
ERBB3-218ENST00000551176 ATP10AO60312 1499 aa12.08□□□□□ -0.48
ERBB3-218ENST00000551176 MLH3Q9UHC1 1453 aa12.08□□□□□ -0.48
ERBB3-218ENST00000551176 MAP3K1Q13233 1512 aa12.07□□□□□ -0.48
ERBB3-218ENST00000551176 KIAA1107Q9UPP5 1409 aa12.07□□□□□ -0.48
ERBB3-218ENST00000551176 ADAMTSL3P82987 1691 aa12.06□□□□□ -0.48
ERBB3-218ENST00000551176 ITSN2Q9NZM3 1697 aa12.06□□□□□ -0.48
ERBB3-218ENST00000551176 C9orf84Q5VXU9 1444 aa12.05□□□□□ -0.48
ERBB3-218ENST00000551176 MBD5Q9P267 1494 aa12.05□□□□□ -0.48
ERBB3-218ENST00000551176 BCORL1Q5H9F3 1711 aa12.05□□□□□ -0.48
ERBB3-218ENST00000551176 HECW2Q9P2P5 1572 aa12.05□□□□□ -0.48
ERBB3-218ENST00000551176 DIP2CQ9Y2E4 1556 aa12.05□□□□□ -0.48
ERBB3-218ENST00000551176 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
ERBB3-218ENST00000551176 SUPT6HQ7KZ85 1726 aaKnown RBP12.03□□□□□ -0.48
ERBB3-218ENST00000551176 PTPRMP28827 1452 aa12.03□□□□□ -0.48
ERBB3-218ENST00000551176 PLEKHH2Q8IVE3 1493 aa12.03□□□□□ -0.48
ERBB3-218ENST00000551176 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
ERBB3-218ENST00000551176 MADDQ8WXG6 1647 aa12.02□□□□□ -0.49
ERBB3-218ENST00000551176 MLECQ14165 292 aa12.02□□□□□ -0.49
ERBB3-218ENST00000551176 SPAG9O60271 1321 aaKnown RBP12.02□□□□□ -0.49
ERBB3-218ENST00000551176 KIDINS220Q9ULH0 1771 aa12.01□□□□□ -0.49
ERBB3-218ENST00000551176 CAMSAP2Q08AD1 1489 aa12.01□□□□□ -0.49
ERBB3-218ENST00000551176 REREQ9P2R6 1566 aa12.01□□□□□ -0.49
ERBB3-218ENST00000551176 INO80Q9ULG1 1556 aaPredicted RBP11.99□□□□□ -0.49
ERBB3-218ENST00000551176 ATP7AQ04656 1500 aa11.98□□□□□ -0.49
ERBB3-218ENST00000551176 MYOM3Q5VTT5 1437 aa11.98□□□□□ -0.49
ERBB3-218ENST00000551176 AGLP35573 1532 aa11.97□□□□□ -0.49
ERBB3-218ENST00000551176 APLP2Q06481 763 aa11.97□□□□□ -0.49
ERBB3-218ENST00000551176 RIMS1Q86UR5 1692 aaKnown RBP11.96□□□□□ -0.5
ERBB3-218ENST00000551176 CCDC141Q6ZP82 1450 aa11.95□□□□□ -0.5
ERBB3-218ENST00000551176 A2MP01023 1474 aa11.95□□□□□ -0.5
ERBB3-218ENST00000551176 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
ERBB3-218ENST00000551176 MIA2Q96PC5 1412 aa11.94□□□□□ -0.5
ERBB3-218ENST00000551176 PLXNC1O60486 1568 aa11.94□□□□□ -0.5
ERBB3-218ENST00000551176 PLPPR3Q6T4P5 718 aa11.94□□□□□ -0.5
ERBB3-218ENST00000551176 CEBPAP49715 358 aaPredicted RBP11.93□□□□□ -0.5
ERBB3-218ENST00000551176 ARHGEF5Q12774 1597 aa11.92□□□□□ -0.5
ERBB3-218ENST00000551176 RSPH4AQ5TD94 716 aa11.92□□□□□ -0.5
ERBB3-218ENST00000551176 FER1L4A9Z1Z3 1794 aa11.91□□□□□ -0.5
ERBB3-218ENST00000551176 FGD6Q6ZV73 1430 aa11.91□□□□□ -0.5
ERBB3-218ENST00000551176 DHX29Q7Z478 1369 aaKnown RBP11.91□□□□□ -0.5
ERBB3-218ENST00000551176 LMTK3Q96Q04 1460 aa11.9□□□□□ -0.5
ERBB3-218ENST00000551176 ABCC5O15440 1437 aa11.89□□□□□ -0.51
ERBB3-218ENST00000551176 TSPY4P0CV99 314 aa11.89□□□□□ -0.51
ERBB3-218ENST00000551176 TSPY10P0CW01 314 aa11.89□□□□□ -0.51
ERBB3-218ENST00000551176 TCOF1Q13428 1488 aaKnown RBP11.89□□□□□ -0.51
ERBB3-218ENST00000551176 PTPN23Q9H3S7 1636 aa11.88□□□□□ -0.51
ERBB3-218ENST00000551176 GGT6Q6P531 493 aa11.87□□□□□ -0.51
ERBB3-218ENST00000551176 PPARGC1BQ86YN6 1023 aaKnown RBP11.87□□□□□ -0.51
ERBB3-218ENST00000551176 MAST1Q9Y2H9 1570 aa11.87□□□□□ -0.51
ERBB3-218ENST00000551176 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
ERBB3-218ENST00000551176 CNTLNQ9NXG0 1405 aa11.86□□□□□ -0.51
ERBB3-218ENST00000551176 KIF3BO15066 747 aa11.85□□□□□ -0.51
ERBB3-218ENST00000551176 HSPA2P54652 639 aa11.85□□□□□ -0.51
ERBB3-218ENST00000551176 DAPK1P53355 1430 aa11.85□□□□□ -0.51
ERBB3-218ENST00000551176 ZMYM3Q14202 1370 aa11.84□□□□□ -0.51
ERBB3-218ENST00000551176 ESF1Q9H501 851 aaKnown RBP11.84□□□□□ -0.51
ERBB3-218ENST00000551176 SHANK2Q9UPX8 1470 aa11.83□□□□□ -0.52
ERBB3-218ENST00000551176 C3P01024 1663 aa11.83□□□□□ -0.52
ERBB3-218ENST00000551176 RRP7BPQ9NSQ0 103 aa11.82□□□□□ -0.52
ERBB3-218ENST00000551176 PPP6R1Q9UPN7 881 aa11.82□□□□□ -0.52
ERBB3-218ENST00000551176 DNMT1P26358 1616 aaKnown RBP11.82□□□□□ -0.52
ERBB3-218ENST00000551176 KIF15Q9NS87 1388 aa11.81□□□□□ -0.52
ERBB3-218ENST00000551176 FAM50AQ14320 339 aaKnown RBP11.81□□□□□ -0.52
ERBB3-218ENST00000551176 CHIC2Q9UKJ5 165 aa11.81□□□□□ -0.52
ERBB3-218ENST00000551176 CROCC2H7BZ55 1655 aa11.81□□□□□ -0.52
ERBB3-218ENST00000551176 CLTCQ00610 1675 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms