RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 FRMPD1Q5SYB0 1578 aa24.46■■□□□ 1.51
PRPF40B-211ENST00000551063 PREX2Q70Z35 1606 aa24.44■■□□□ 1.5
PRPF40B-211ENST00000551063 SCAPERQ9BY12 1400 aa24.44■■□□□ 1.5
PRPF40B-211ENST00000551063 TIAM1Q13009 1591 aa24.42■■□□□ 1.5
PRPF40B-211ENST00000551063 POGZQ7Z3K3 1410 aa24.42■■□□□ 1.5
PRPF40B-211ENST00000551063 MAP3K1Q13233 1512 aa24.4■■□□□ 1.5
PRPF40B-211ENST00000551063 ZMYM4Q5VZL5 1548 aa24.4■■□□□ 1.5
PRPF40B-211ENST00000551063 GPATCH8Q9UKJ3 1502 aaKnown RBP24.4■■□□□ 1.5
PRPF40B-211ENST00000551063 RICTORQ6R327 1708 aa24.39■■□□□ 1.5
PRPF40B-211ENST00000551063 CCNB3Q8WWL7 1395 aa24.38■■□□□ 1.49
PRPF40B-211ENST00000551063 CDC42BPBQ9Y5S2 1711 aa24.37■■□□□ 1.49
PRPF40B-211ENST00000551063 CDC42BPAQ5VT25 1732 aa24.35■■□□□ 1.49
PRPF40B-211ENST00000551063 MAGI2Q86UL8 1455 aa24.35■■□□□ 1.49
PRPF40B-211ENST00000551063 ZNF518AQ6AHZ1 1483 aa24.34■■□□□ 1.49
PRPF40B-211ENST00000551063 LRRC9Q6ZRR7 1453 aa24.34■■□□□ 1.49
PRPF40B-211ENST00000551063 ABCC1P33527 1531 aa24.34■■□□□ 1.49
PRPF40B-211ENST00000551063 ARHGEF40Q8TER5 1519 aa24.33■■□□□ 1.49
PRPF40B-211ENST00000551063 NCOA2Q15596 1464 aa24.32■■□□□ 1.48
PRPF40B-211ENST00000551063 CFDP1Q9UEE9 299 aaPredicted RBP24.3■■□□□ 1.48
PRPF40B-211ENST00000551063 KDM5CP41229 1560 aa24.29■■□□□ 1.48
PRPF40B-211ENST00000551063 SUPT6HQ7KZ85 1726 aaKnown RBP24.29■■□□□ 1.48
PRPF40B-211ENST00000551063 ZFYVE16Q7Z3T8 1539 aa24.29■■□□□ 1.48
PRPF40B-211ENST00000551063 HECW2Q9P2P5 1572 aa24.29■■□□□ 1.48
PRPF40B-211ENST00000551063 PLEKHH2Q8IVE3 1493 aa24.28■■□□□ 1.48
PRPF40B-211ENST00000551063 ARID4BQ4LE39 1312 aaPredicted RBP24.28■■□□□ 1.48
PRPF40B-211ENST00000551063 ARHGEF12Q9NZN5 1544 aa24.27■■□□□ 1.48
PRPF40B-211ENST00000551063 SAMD9LQ8IVG5 1584 aa24.27■■□□□ 1.48
PRPF40B-211ENST00000551063 YEATS2Q9ULM3 1422 aa24.27■■□□□ 1.48
PRPF40B-211ENST00000551063 KIAA1107Q9UPP5 1409 aa24.27■■□□□ 1.48
PRPF40B-211ENST00000551063 APLP2Q06481 763 aa24.26■■□□□ 1.47
PRPF40B-211ENST00000551063 ITSN2Q9NZM3 1697 aa24.26■■□□□ 1.47
PRPF40B-211ENST00000551063 ZNF777Q9ULD5 760 aaPredicted RBP24.25■■□□□ 1.47
PRPF40B-211ENST00000551063 TRAPPC8Q9Y2L5 1435 aa24.25■■□□□ 1.47
PRPF40B-211ENST00000551063 AFAP1Q8N556 730 aa24.24■■□□□ 1.47
PRPF40B-211ENST00000551063 KANK4Q5T7N3 995 aaPredicted RBP24.23■■□□□ 1.47
PRPF40B-211ENST00000551063 SYCP2Q9BX26 1530 aa24.22■■□□□ 1.47
PRPF40B-211ENST00000551063 MLH3Q9UHC1 1453 aa24.22■■□□□ 1.47
PRPF40B-211ENST00000551063 ADAMTSL3P82987 1691 aa24.21■■□□□ 1.47
PRPF40B-211ENST00000551063 PTPRMP28827 1452 aa24.19■■□□□ 1.46
PRPF40B-211ENST00000551063 ATP10AO60312 1499 aa24.17■■□□□ 1.46
PRPF40B-211ENST00000551063 C9orf84Q5VXU9 1444 aa24.17■■□□□ 1.46
PRPF40B-211ENST00000551063 BCORL1Q5H9F3 1711 aa24.16■■□□□ 1.46
PRPF40B-211ENST00000551063 HNRNPMP52272 730 aaKnown RBP eCLIP24.14■■□□□ 1.45
PRPF40B-211ENST00000551063 ZNF644Q9H582 1327 aaPredicted RBP24.13■■□□□ 1.45
PRPF40B-211ENST00000551063 MBD5Q9P267 1494 aa24.13■■□□□ 1.45
PRPF40B-211ENST00000551063 MYOM3Q5VTT5 1437 aa24.12■■□□□ 1.45
PRPF40B-211ENST00000551063 MYT1LQ9UL68 1186 aa24.12■■□□□ 1.45
PRPF40B-211ENST00000551063 CAMSAP2Q08AD1 1489 aa24.12■■□□□ 1.45
PRPF40B-211ENST00000551063 DIP2CQ9Y2E4 1556 aa24.12■■□□□ 1.45
PRPF40B-211ENST00000551063 REREQ9P2R6 1566 aa24.11■■□□□ 1.45
PRPF40B-211ENST00000551063 SPAG9O60271 1321 aaKnown RBP24.1■■□□□ 1.45
PRPF40B-211ENST00000551063 MIA2Q96PC5 1412 aa24.1■■□□□ 1.45
PRPF40B-211ENST00000551063 ILDR1Q86SU0 546 aaPredicted RBP24.09■■□□□ 1.45
PRPF40B-211ENST00000551063 ABCA6Q8N139 1617 aa24.09■■□□□ 1.45
PRPF40B-211ENST00000551063 MADDQ8WXG6 1647 aa24.09■■□□□ 1.45
PRPF40B-211ENST00000551063 KIDINS220Q9ULH0 1771 aa24.07■■□□□ 1.44
PRPF40B-211ENST00000551063 RSPH4AQ5TD94 716 aa24.07■■□□□ 1.44
PRPF40B-211ENST00000551063 CCDC141Q6ZP82 1450 aa24.07■■□□□ 1.44
PRPF40B-211ENST00000551063 ATP7AQ04656 1500 aa24.06■■□□□ 1.44
PRPF40B-211ENST00000551063 INO80Q9ULG1 1556 aaPredicted RBP24.05■■□□□ 1.44
PRPF40B-211ENST00000551063 SIGLEC1Q9BZZ2 1709 aa24.04■■□□□ 1.44
PRPF40B-211ENST00000551063 RTEL1-TNFRSF6BF6WH68 1400 aa24.03■■□□□ 1.44
PRPF40B-211ENST00000551063 AGLP35573 1532 aa24.03■■□□□ 1.44
PRPF40B-211ENST00000551063 ARHGEF5Q12774 1597 aa24.03■■□□□ 1.44
PRPF40B-211ENST00000551063 RIMS1Q86UR5 1692 aaKnown RBP24■■□□□ 1.43
PRPF40B-211ENST00000551063 MLECQ14165 292 aa24■■□□□ 1.43
PRPF40B-211ENST00000551063 FGD6Q6ZV73 1430 aa23.97■■□□□ 1.43
PRPF40B-211ENST00000551063 A2MP01023 1474 aa23.95■■□□□ 1.42
PRPF40B-211ENST00000551063 PLPPR3Q6T4P5 718 aa23.95■■□□□ 1.42
PRPF40B-211ENST00000551063 PLXNC1O60486 1568 aa23.95■■□□□ 1.42
PRPF40B-211ENST00000551063 TCOF1Q13428 1488 aaKnown RBP23.94■■□□□ 1.42
PRPF40B-211ENST00000551063 TSPY4P0CV99 314 aa23.93■■□□□ 1.42
PRPF40B-211ENST00000551063 TSPY10P0CW01 314 aa23.93■■□□□ 1.42
PRPF40B-211ENST00000551063 LMTK3Q96Q04 1460 aa23.93■■□□□ 1.42
PRPF40B-211ENST00000551063 PTPN23Q9H3S7 1636 aa23.92■■□□□ 1.42
PRPF40B-211ENST00000551063 MAST1Q9Y2H9 1570 aa23.9■■□□□ 1.42
PRPF40B-211ENST00000551063 ADGBQ8N7X0 1667 aa23.89■■□□□ 1.41
PRPF40B-211ENST00000551063 DHX29Q7Z478 1369 aaKnown RBP23.88■■□□□ 1.41
PRPF40B-211ENST00000551063 SHANK2Q9UPX8 1470 aa23.87■■□□□ 1.41
PRPF40B-211ENST00000551063 FER1L4A9Z1Z3 1794 aa23.87■■□□□ 1.41
PRPF40B-211ENST00000551063 ABCC5O15440 1437 aa23.84■■□□□ 1.41
PRPF40B-211ENST00000551063 HSPA2P54652 639 aa23.83■■□□□ 1.41
PRPF40B-211ENST00000551063 DAPK1P53355 1430 aa23.83■■□□□ 1.4
PRPF40B-211ENST00000551063 CNTLNQ9NXG0 1405 aa23.83■■□□□ 1.4
PRPF40B-211ENST00000551063 DNMT1P26358 1616 aaKnown RBP23.81■■□□□ 1.4
PRPF40B-211ENST00000551063 ESF1Q9H501 851 aaKnown RBP23.8■■□□□ 1.4
PRPF40B-211ENST00000551063 FBXO41Q8TF61 875 aa23.79■■□□□ 1.4
PRPF40B-211ENST00000551063 CEBPAP49715 358 aaPredicted RBP23.78■■□□□ 1.4
PRPF40B-211ENST00000551063 PPP6R1Q9UPN7 881 aa23.78■■□□□ 1.4
PRPF40B-211ENST00000551063 CROCC2H7BZ55 1655 aa23.77■■□□□ 1.4
PRPF40B-211ENST00000551063 FAM50AQ14320 339 aaKnown RBP23.75■■□□□ 1.39
PRPF40B-211ENST00000551063 GGT6Q6P531 493 aa23.74■■□□□ 1.39
PRPF40B-211ENST00000551063 KIF3BO15066 747 aa23.73■■□□□ 1.39
PRPF40B-211ENST00000551063 KIF15Q9NS87 1388 aa23.73■■□□□ 1.39
PRPF40B-211ENST00000551063 DUOX2Q9NRD8 1548 aa23.73■■□□□ 1.39
PRPF40B-211ENST00000551063 FAM135AQ9P2D6 1515 aa23.73■■□□□ 1.39
PRPF40B-211ENST00000551063 ANKRD30AQ9BXX3 1397 aa23.71■■□□□ 1.39
PRPF40B-211ENST00000551063 PPARGC1BQ86YN6 1023 aaKnown RBP23.71■■□□□ 1.39
PRPF40B-211ENST00000551063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.7■■□□□ 1.38
PRPF40B-211ENST00000551063 MROH2AA6NES4 1674 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms