RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 TIMELESSQ9UNS1 1208 aa22.41■■□□□ 1.18
SCN8A-206ENST00000550891 ABCC5O15440 1437 aa22.41■■□□□ 1.18
SCN8A-206ENST00000550891 ROCK1Q13464 1354 aa22.4■■□□□ 1.18
SCN8A-206ENST00000550891 CLASP1Q7Z460 1538 aa22.4■■□□□ 1.18
SCN8A-206ENST00000550891 DNMT1P26358 1616 aaKnown RBP22.4■■□□□ 1.18
SCN8A-206ENST00000550891 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
SCN8A-206ENST00000550891 GCC2Q8IWJ2 1684 aa22.38■■□□□ 1.17
SCN8A-206ENST00000550891 ABCC2Q92887 1545 aa22.36■■□□□ 1.17
SCN8A-206ENST00000550891 TONSLQ96HA7 1378 aa22.35■■□□□ 1.17
SCN8A-206ENST00000550891 ABCC10Q5T3U5 1492 aa22.34■■□□□ 1.17
SCN8A-206ENST00000550891 TSPY4P0CV99 314 aa22.33■■□□□ 1.17
SCN8A-206ENST00000550891 TSPY10P0CW01 314 aa22.33■■□□□ 1.17
SCN8A-206ENST00000550891 KCNH8Q96L42 1107 aa22.31■■□□□ 1.16
SCN8A-206ENST00000550891 ANKRD30AQ9BXX3 1397 aa22.31■■□□□ 1.16
SCN8A-206ENST00000550891 MPHOSPH9Q99550 1183 aa22.28■■□□□ 1.16
SCN8A-206ENST00000550891 CDC42BPAQ5VT25 1732 aa22.28■■□□□ 1.16
SCN8A-206ENST00000550891 OSCARQ8IYS5 282 aa22.26■■□□□ 1.15
SCN8A-206ENST00000550891 NCOA1Q15788 1441 aa22.25■■□□□ 1.15
SCN8A-206ENST00000550891 HNRNPMP52272 730 aaKnown RBP eCLIP22.24■■□□□ 1.15
SCN8A-206ENST00000550891 SLC4A1APQ9BWU0 796 aaKnown RBP22.24■■□□□ 1.15
SCN8A-206ENST00000550891 KDM6BO15054 1643 aa22.23■■□□□ 1.15
SCN8A-206ENST00000550891 UHRF1BP1LA0JNW5 1464 aa22.23■■□□□ 1.15
SCN8A-206ENST00000550891 PPP1R15AO75807 674 aaPredicted RBP22.22■■□□□ 1.15
SCN8A-206ENST00000550891 RSPH4AQ5TD94 716 aa22.22■■□□□ 1.15
SCN8A-206ENST00000550891 C9orf84Q5VXU9 1444 aa22.21■■□□□ 1.15
SCN8A-206ENST00000550891 ADGBQ8N7X0 1667 aa22.2■■□□□ 1.14
SCN8A-206ENST00000550891 ARHGAP5Q13017 1502 aa22.2■■□□□ 1.14
SCN8A-206ENST00000550891 ADGRL2O95490 1459 aa22.2■■□□□ 1.14
SCN8A-206ENST00000550891 SHANK2Q9UPX8 1470 aa22.18■■□□□ 1.14
SCN8A-206ENST00000550891 KDM5BQ9UGL1 1544 aa22.17■■□□□ 1.14
SCN8A-206ENST00000550891 PREX2Q70Z35 1606 aa22.17■■□□□ 1.14
SCN8A-206ENST00000550891 ANKRD50Q9ULJ7 1429 aa22.17■■□□□ 1.14
SCN8A-206ENST00000550891 CROCC2H7BZ55 1655 aa22.17■■□□□ 1.14
SCN8A-206ENST00000550891 ZCCHC11Q5TAX3 1644 aaKnown RBP22.16■■□□□ 1.14
SCN8A-206ENST00000550891 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.16■■□□□ 1.14
SCN8A-206ENST00000550891 FOXD1Q16676 465 aa22.15■■□□□ 1.14
SCN8A-206ENST00000550891 CCDC141Q6ZP82 1450 aa22.15■■□□□ 1.14
SCN8A-206ENST00000550891 TTC37Q6PGP7 1564 aa22.14■■□□□ 1.13
SCN8A-206ENST00000550891 EFCAB2Q5VUJ9 269 aa22.13■■□□□ 1.13
SCN8A-206ENST00000550891 ARHGEF5Q12774 1597 aa22.12■■□□□ 1.13
SCN8A-206ENST00000550891 PLEKHH2Q8IVE3 1493 aa22.12■■□□□ 1.13
SCN8A-206ENST00000550891 KIF15Q9NS87 1388 aa22.12■■□□□ 1.13
SCN8A-206ENST00000550891 CDC42BPBQ9Y5S2 1711 aa22.11■■□□□ 1.13
SCN8A-206ENST00000550891 NPM1P06748 294 aaKnown RBP eCLIP22.11■■□□□ 1.13
SCN8A-206ENST00000550891 SAMD9LQ8IVG5 1584 aa22.11■■□□□ 1.13
SCN8A-206ENST00000550891 MIER1Q8N108 512 aa22.1■■□□□ 1.13
SCN8A-206ENST00000550891 MBD5Q9P267 1494 aa22.1■■□□□ 1.13
SCN8A-206ENST00000550891 MYO5CQ9NQX4 1742 aa22.09■■□□□ 1.13
SCN8A-206ENST00000550891 DENND4BO75064 1496 aaPredicted RBP22.08■■□□□ 1.13
SCN8A-206ENST00000550891 SYCP2Q9BX26 1530 aa22.07■■□□□ 1.12
SCN8A-206ENST00000550891 PLCH2O75038 1416 aa22.07■■□□□ 1.12
SCN8A-206ENST00000550891 NUP155O75694 1391 aa22.06■■□□□ 1.12
SCN8A-206ENST00000550891 KIAA1107Q9UPP5 1409 aa22.05■■□□□ 1.12
SCN8A-206ENST00000550891 ANKRD30BQ9BXX2 1392 aa22.05■■□□□ 1.12
SCN8A-206ENST00000550891 PKD2Q13563 968 aa22.04■■□□□ 1.12
SCN8A-206ENST00000550891 WDR7Q9Y4E6 1490 aa22.03■■□□□ 1.12
SCN8A-206ENST00000550891 CENPBP07199 599 aaPredicted RBP22.02■■□□□ 1.12
SCN8A-206ENST00000550891 PZPP20742 1482 aa22.02■■□□□ 1.12
SCN8A-206ENST00000550891 L3MBTL2Q969R5 705 aa22■■□□□ 1.11
SCN8A-206ENST00000550891 RPRD2Q5VT52 1461 aaKnown RBP21.98■■□□□ 1.11
SCN8A-206ENST00000550891 HIRIP3Q9BW71 556 aaPredicted RBP21.98■■□□□ 1.11
SCN8A-206ENST00000550891 YTHDC1Q96MU7 727 aaKnown RBP21.95■■□□□ 1.1
SCN8A-206ENST00000550891 ASXL2Q76L83 1435 aa21.94■■□□□ 1.1
SCN8A-206ENST00000550891 MYT1LQ9UL68 1186 aa21.94■■□□□ 1.1
SCN8A-206ENST00000550891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.93■■□□□ 1.1
SCN8A-206ENST00000550891 MAST1Q9Y2H9 1570 aa21.93■■□□□ 1.1
SCN8A-206ENST00000550891 DDX10Q13206 875 aaKnown RBP21.92■■□□□ 1.1
SCN8A-206ENST00000550891 SPAG9O60271 1321 aaKnown RBP21.92■■□□□ 1.1
SCN8A-206ENST00000550891 ARAP3Q8WWN8 1544 aa21.91■■□□□ 1.1
SCN8A-206ENST00000550891 ABCC1P33527 1531 aa21.9■■□□□ 1.1
SCN8A-206ENST00000550891 ARHGEF12Q9NZN5 1544 aa21.89■■□□□ 1.1
SCN8A-206ENST00000550891 EIF4G2P78344 907 aaKnown RBP eCLIP21.88■■□□□ 1.09
SCN8A-206ENST00000550891 FANCAO15360 1455 aa21.88■■□□□ 1.09
SCN8A-206ENST00000550891 KDM5DQ9BY66 1539 aa21.87■■□□□ 1.09
SCN8A-206ENST00000550891 TRAPPC8Q9Y2L5 1435 aa21.87■■□□□ 1.09
SCN8A-206ENST00000550891 AFAP1Q8N556 730 aa21.86■■□□□ 1.09
SCN8A-206ENST00000550891 DUOX2Q9NRD8 1548 aa21.86■■□□□ 1.09
SCN8A-206ENST00000550891 PLXNC1O60486 1568 aa21.86■■□□□ 1.09
SCN8A-206ENST00000550891 ZNF326Q5BKZ1 582 aaKnown RBP21.84■■□□□ 1.09
SCN8A-206ENST00000550891 TEX14Q8IWB6 1497 aa21.84■■□□□ 1.09
SCN8A-206ENST00000550891 ABCA9Q8IUA7 1624 aa21.83■■□□□ 1.09
SCN8A-206ENST00000550891 FAM135AQ9P2D6 1515 aa21.82■■□□□ 1.08
SCN8A-206ENST00000550891 ERBINQ96RT1 1412 aa21.82■■□□□ 1.08
SCN8A-206ENST00000550891 HSPA5P11021 654 aaKnown RBP21.82■■□□□ 1.08
SCN8A-206ENST00000550891 ADGRL1O94910 1474 aa21.81■■□□□ 1.08
SCN8A-206ENST00000550891 SCAPERQ9BY12 1400 aa21.8■■□□□ 1.08
SCN8A-206ENST00000550891 RTEL1-TNFRSF6BF6WH68 1400 aa21.8■■□□□ 1.08
SCN8A-206ENST00000550891 NBPF8Q3BBV2 869 aa21.78■■□□□ 1.08
SCN8A-206ENST00000550891 CCDC144AA2RUR9 1427 aa21.76■■□□□ 1.07
SCN8A-206ENST00000550891 ANP32CO43423 234 aa21.75■■□□□ 1.07
SCN8A-206ENST00000550891 CD109Q6YHK3 1445 aa21.75■■□□□ 1.07
SCN8A-206ENST00000550891 UNC13BO14795 1591 aa21.75■■□□□ 1.07
SCN8A-206ENST00000550891 CYB5RLQ6IPT4 315 aa21.74■■□□□ 1.07
SCN8A-206ENST00000550891 KDM2AQ9Y2K7 1162 aa21.73■■□□□ 1.07
SCN8A-206ENST00000550891 ZFYVE16Q7Z3T8 1539 aa21.72■■□□□ 1.07
SCN8A-206ENST00000550891 DCAF11Q8TEB1 546 aa21.7■■□□□ 1.07
SCN8A-206ENST00000550891 ATP7AQ04656 1500 aa21.7■■□□□ 1.06
SCN8A-206ENST00000550891 KANK1Q14678 1352 aa21.7■■□□□ 1.06
SCN8A-206ENST00000550891 IQGAP3Q86VI3 1631 aa21.68■■□□□ 1.06
SCN8A-206ENST00000550891 KIF3BO15066 747 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms