RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 ZFYVE16Q7Z3T8 1539 aa19.05■□□□□ 0.64
ERBB3-216ENST00000550869 POGZQ7Z3K3 1410 aa19.04■□□□□ 0.64
ERBB3-216ENST00000550869 CDK11AQ9UQ88 783 aaPredicted RBP19.03■□□□□ 0.64
ERBB3-216ENST00000550869 FYCO1Q9BQS8 1478 aa19.03■□□□□ 0.64
ERBB3-216ENST00000550869 PCF11O94913 1555 aaKnown RBP19.02■□□□□ 0.64
ERBB3-216ENST00000550869 KIF14Q15058 1648 aa19.01■□□□□ 0.63
ERBB3-216ENST00000550869 RIMS1Q86UR5 1692 aaKnown RBP19.01■□□□□ 0.63
ERBB3-216ENST00000550869 MAP3K1Q13233 1512 aa18.99■□□□□ 0.63
ERBB3-216ENST00000550869 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
ERBB3-216ENST00000550869 TROQ12816 1431 aaPredicted RBP18.97■□□□□ 0.63
ERBB3-216ENST00000550869 YEATS2Q9ULM3 1422 aa18.97■□□□□ 0.63
ERBB3-216ENST00000550869 EFCAB2Q5VUJ9 269 aa18.96■□□□□ 0.63
ERBB3-216ENST00000550869 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
ERBB3-216ENST00000550869 LMTK3Q96Q04 1460 aa18.96■□□□□ 0.63
ERBB3-216ENST00000550869 SIGLEC1Q9BZZ2 1709 aa18.95■□□□□ 0.62
ERBB3-216ENST00000550869 LRRIQ1Q96JM4 1722 aa18.94■□□□□ 0.62
ERBB3-216ENST00000550869 FER1L4A9Z1Z3 1794 aa18.94■□□□□ 0.62
ERBB3-216ENST00000550869 ZNF518AQ6AHZ1 1483 aa18.94■□□□□ 0.62
ERBB3-216ENST00000550869 ATP10AO60312 1499 aa18.92■□□□□ 0.62
ERBB3-216ENST00000550869 CCDC18Q5T9S5 1454 aa18.92■□□□□ 0.62
ERBB3-216ENST00000550869 C9orf84Q5VXU9 1444 aa18.91■□□□□ 0.62
ERBB3-216ENST00000550869 ARHGAP5Q13017 1502 aa18.91■□□□□ 0.62
ERBB3-216ENST00000550869 KDM5CP41229 1560 aa18.9■□□□□ 0.62
ERBB3-216ENST00000550869 TIAM1Q13009 1591 aa18.89■□□□□ 0.62
ERBB3-216ENST00000550869 ARHGEF12Q9NZN5 1544 aa18.89■□□□□ 0.61
ERBB3-216ENST00000550869 CDC42BPBQ9Y5S2 1711 aa18.88■□□□□ 0.61
ERBB3-216ENST00000550869 PREX2Q70Z35 1606 aa18.87■□□□□ 0.61
ERBB3-216ENST00000550869 APLP2Q06481 763 aa18.86■□□□□ 0.61
ERBB3-216ENST00000550869 REREQ9P2R6 1566 aa18.85■□□□□ 0.61
ERBB3-216ENST00000550869 KANK4Q5T7N3 995 aaPredicted RBP18.84■□□□□ 0.61
ERBB3-216ENST00000550869 FBXO41Q8TF61 875 aa18.83■□□□□ 0.6
ERBB3-216ENST00000550869 LRRC9Q6ZRR7 1453 aa18.82■□□□□ 0.6
ERBB3-216ENST00000550869 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
ERBB3-216ENST00000550869 PREX1Q8TCU6 1659 aa18.82■□□□□ 0.6
ERBB3-216ENST00000550869 DIP2CQ9Y2E4 1556 aa18.81■□□□□ 0.6
ERBB3-216ENST00000550869 ABCC1P33527 1531 aa18.81■□□□□ 0.6
ERBB3-216ENST00000550869 MLECQ14165 292 aa18.81■□□□□ 0.6
ERBB3-216ENST00000550869 CDC42BPAQ5VT25 1732 aa18.8■□□□□ 0.6
ERBB3-216ENST00000550869 ITSN2Q9NZM3 1697 aa18.8■□□□□ 0.6
ERBB3-216ENST00000550869 AFAP1Q8N556 730 aa18.79■□□□□ 0.6
ERBB3-216ENST00000550869 ABCA6Q8N139 1617 aa18.78■□□□□ 0.6
ERBB3-216ENST00000550869 AGLP35573 1532 aa18.76■□□□□ 0.59
ERBB3-216ENST00000550869 HSPA2P54652 639 aa18.75■□□□□ 0.59
ERBB3-216ENST00000550869 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
ERBB3-216ENST00000550869 SETD1BQ9UPS6 1966 aaKnown RBP18.74■□□□□ 0.59
ERBB3-216ENST00000550869 EHBP1L1Q8N3D4 1523 aa18.74■□□□□ 0.59
ERBB3-216ENST00000550869 MTUS2Q5JR59 1369 aa18.73■□□□□ 0.59
ERBB3-216ENST00000550869 MYT1LQ9UL68 1186 aa18.73■□□□□ 0.59
ERBB3-216ENST00000550869 TRAPPC8Q9Y2L5 1435 aa18.73■□□□□ 0.59
ERBB3-216ENST00000550869 KIDINS220Q9ULH0 1771 aa18.73■□□□□ 0.59
ERBB3-216ENST00000550869 PPARGC1BQ86YN6 1023 aaKnown RBP18.72■□□□□ 0.59
ERBB3-216ENST00000550869 UHRF1BP1Q6BDS2 1440 aa18.69■□□□□ 0.58
ERBB3-216ENST00000550869 C3P01024 1663 aa18.69■□□□□ 0.58
ERBB3-216ENST00000550869 SAMD9LQ8IVG5 1584 aa18.68■□□□□ 0.58
ERBB3-216ENST00000550869 GPATCH8Q9UKJ3 1502 aaKnown RBP18.68■□□□□ 0.58
ERBB3-216ENST00000550869 CNTLNQ9NXG0 1405 aa18.67■□□□□ 0.58
ERBB3-216ENST00000550869 PLEKHH2Q8IVE3 1493 aa18.67■□□□□ 0.58
ERBB3-216ENST00000550869 SUPT6HQ7KZ85 1726 aaKnown RBP18.66■□□□□ 0.58
ERBB3-216ENST00000550869 SYCP2Q9BX26 1530 aa18.66■□□□□ 0.58
ERBB3-216ENST00000550869 CEBPAP49715 358 aaPredicted RBP18.65■□□□□ 0.58
ERBB3-216ENST00000550869 ESF1Q9H501 851 aaKnown RBP18.65■□□□□ 0.58
ERBB3-216ENST00000550869 KIAA1107Q9UPP5 1409 aa18.65■□□□□ 0.58
ERBB3-216ENST00000550869 NCOA2Q15596 1464 aa18.65■□□□□ 0.58
ERBB3-216ENST00000550869 MROH2AA6NES4 1674 aa18.64■□□□□ 0.57
ERBB3-216ENST00000550869 STRCQ7RTU9 1775 aa18.64■□□□□ 0.57
ERBB3-216ENST00000550869 DMRT2Q9Y5R5 561 aa18.64■□□□□ 0.57
ERBB3-216ENST00000550869 INO80Q9ULG1 1556 aaPredicted RBP18.62■□□□□ 0.57
ERBB3-216ENST00000550869 ATP7AQ04656 1500 aa18.61■□□□□ 0.57
ERBB3-216ENST00000550869 CCNB3Q8WWL7 1395 aa18.61■□□□□ 0.57
ERBB3-216ENST00000550869 SPAG9O60271 1321 aaKnown RBP18.6■□□□□ 0.57
ERBB3-216ENST00000550869 CERKQ8TCT0 537 aa18.6■□□□□ 0.57
ERBB3-216ENST00000550869 ZNF777Q9ULD5 760 aaPredicted RBP18.6■□□□□ 0.57
ERBB3-216ENST00000550869 PLXNC1O60486 1568 aa18.59■□□□□ 0.57
ERBB3-216ENST00000550869 CFDP1Q9UEE9 299 aaPredicted RBP18.59■□□□□ 0.57
ERBB3-216ENST00000550869 NPATQ14207 1427 aa18.58■□□□□ 0.57
ERBB3-216ENST00000550869 RRBP1Q9P2E9 1410 aaKnown RBP18.57■□□□□ 0.56
ERBB3-216ENST00000550869 ADGBQ8N7X0 1667 aa18.56■□□□□ 0.56
ERBB3-216ENST00000550869 MYOM3Q5VTT5 1437 aa18.56■□□□□ 0.56
ERBB3-216ENST00000550869 HNRNPMP52272 730 aaKnown RBP eCLIP18.55■□□□□ 0.56
ERBB3-216ENST00000550869 PTPRTO14522 1441 aa18.55■□□□□ 0.56
ERBB3-216ENST00000550869 A2MP01023 1474 aa18.54■□□□□ 0.56
ERBB3-216ENST00000550869 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
ERBB3-216ENST00000550869 MIA2Q96PC5 1412 aa18.53■□□□□ 0.56
ERBB3-216ENST00000550869 CLTCQ00610 1675 aaKnown RBP18.51■□□□□ 0.55
ERBB3-216ENST00000550869 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
ERBB3-216ENST00000550869 ZMYM3Q14202 1370 aa18.51■□□□□ 0.55
ERBB3-216ENST00000550869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.51■□□□□ 0.55
ERBB3-216ENST00000550869 PPP6R1Q9UPN7 881 aa18.5■□□□□ 0.55
ERBB3-216ENST00000550869 RTEL1-TNFRSF6BF6WH68 1400 aa18.49■□□□□ 0.55
ERBB3-216ENST00000550869 NCOA1Q15788 1441 aa18.49■□□□□ 0.55
ERBB3-216ENST00000550869 MBD5Q9P267 1494 aa18.49■□□□□ 0.55
ERBB3-216ENST00000550869 ZNF142P52746 1687 aaPredicted RBP18.49■□□□□ 0.55
ERBB3-216ENST00000550869 TCOF1Q13428 1488 aaKnown RBP18.47■□□□□ 0.55
ERBB3-216ENST00000550869 CAMSAP1Q5T5Y3 1602 aa18.46■□□□□ 0.55
ERBB3-216ENST00000550869 MYO3AQ8NEV4 1616 aa18.46■□□□□ 0.55
ERBB3-216ENST00000550869 IQSEC2Q5JU85 1478 aa18.45■□□□□ 0.54
ERBB3-216ENST00000550869 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
ERBB3-216ENST00000550869 PTPN23Q9H3S7 1636 aa18.44■□□□□ 0.54
ERBB3-216ENST00000550869 CEP170BQ9Y4F5 1589 aaPredicted RBP18.43■□□□□ 0.54
ERBB3-216ENST00000550869 PTPRKQ15262 1439 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms