RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
TMEM116-213ENST00000550831 SETD5Q9C0A6 1442 aa13.68□□□□□ -0.22
TMEM116-213ENST00000550831 PTPN23Q9H3S7 1636 aa13.68□□□□□ -0.22
TMEM116-213ENST00000550831 PRG4Q92954 1404 aaPredicted RBP13.67□□□□□ -0.22
TMEM116-213ENST00000550831 PLB1Q6P1J6 1458 aa13.65□□□□□ -0.22
TMEM116-213ENST00000550831 CDK11AQ9UQ88 783 aaPredicted RBP13.64□□□□□ -0.23
TMEM116-213ENST00000550831 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
TMEM116-213ENST00000550831 TROQ12816 1431 aaPredicted RBP13.64□□□□□ -0.23
TMEM116-213ENST00000550831 RAB3GAP2Q9H2M9 1393 aa13.64□□□□□ -0.23
TMEM116-213ENST00000550831 ABCC10Q5T3U5 1492 aa13.64□□□□□ -0.23
TMEM116-213ENST00000550831 AKNAQ7Z591 1439 aa13.63□□□□□ -0.23
TMEM116-213ENST00000550831 HFM1A2PYH4 1435 aa13.63□□□□□ -0.23
TMEM116-213ENST00000550831 DIP2BQ9P265 1576 aa13.62□□□□□ -0.23
TMEM116-213ENST00000550831 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
TMEM116-213ENST00000550831 ITSN2Q9NZM3 1697 aa13.59□□□□□ -0.23
TMEM116-213ENST00000550831 PTPRKQ15262 1439 aa13.59□□□□□ -0.23
TMEM116-213ENST00000550831 PTPRGP23470 1445 aa13.59□□□□□ -0.23
TMEM116-213ENST00000550831 ATP10BO94823 1461 aa13.58□□□□□ -0.24
TMEM116-213ENST00000550831 FAM69CQ0P6D2 419 aa13.57□□□□□ -0.24
TMEM116-213ENST00000550831 KDM6BO15054 1643 aa13.57□□□□□ -0.24
TMEM116-213ENST00000550831 GCC2Q8IWJ2 1684 aa13.57□□□□□ -0.24
TMEM116-213ENST00000550831 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
TMEM116-213ENST00000550831 ACIN1Q9UKV3 1341 aaKnown RBP13.56□□□□□ -0.24
TMEM116-213ENST00000550831 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
TMEM116-213ENST00000550831 NAIPQ13075 1403 aa13.55□□□□□ -0.24
TMEM116-213ENST00000550831 ITGAEP38570 1179 aa13.55□□□□□ -0.24
TMEM116-213ENST00000550831 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
TMEM116-213ENST00000550831 ROCK1Q13464 1354 aa13.54□□□□□ -0.24
TMEM116-213ENST00000550831 KIF14Q15058 1648 aa13.54□□□□□ -0.24
TMEM116-213ENST00000550831 GPATCH8Q9UKJ3 1502 aaKnown RBP13.53□□□□□ -0.24
TMEM116-213ENST00000550831 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
TMEM116-213ENST00000550831 UHRF1BP1LA0JNW5 1464 aa13.53□□□□□ -0.24
TMEM116-213ENST00000550831 ABCC2Q92887 1545 aa13.52□□□□□ -0.24
TMEM116-213ENST00000550831 CDC42BPAQ5VT25 1732 aa13.5□□□□□ -0.25
TMEM116-213ENST00000550831 DAPK1P53355 1430 aa13.5□□□□□ -0.25
TMEM116-213ENST00000550831 PLEKHD1A6NEE1 506 aa13.49□□□□□ -0.25
TMEM116-213ENST00000550831 TIMELESSQ9UNS1 1208 aa13.49□□□□□ -0.25
TMEM116-213ENST00000550831 TSPOAP1O95153 1857 aa13.49□□□□□ -0.25
TMEM116-213ENST00000550831 KDM4FA0A1W2PPD8 638 aa13.48□□□□□ -0.25
TMEM116-213ENST00000550831 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
TMEM116-213ENST00000550831 ABCC5O15440 1437 aa13.48□□□□□ -0.25
TMEM116-213ENST00000550831 CROCC2H7BZ55 1655 aa13.48□□□□□ -0.25
TMEM116-213ENST00000550831 CAMSAP2Q08AD1 1489 aa13.47□□□□□ -0.25
TMEM116-213ENST00000550831 ADGRL2O95490 1459 aa13.47□□□□□ -0.25
TMEM116-213ENST00000550831 KDM5BQ9UGL1 1544 aa13.46□□□□□ -0.26
TMEM116-213ENST00000550831 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
TMEM116-213ENST00000550831 SHANK2Q9UPX8 1470 aa13.45□□□□□ -0.26
TMEM116-213ENST00000550831 ARID3CA6NKF2 412 aa13.44□□□□□ -0.26
TMEM116-213ENST00000550831 PREX2Q70Z35 1606 aa13.44□□□□□ -0.26
TMEM116-213ENST00000550831 ARHGEF5Q12774 1597 aa13.44□□□□□ -0.26
TMEM116-213ENST00000550831 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
TMEM116-213ENST00000550831 CFDP1Q9UEE9 299 aaPredicted RBP13.42□□□□□ -0.26
TMEM116-213ENST00000550831 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
TMEM116-213ENST00000550831 PPRC1Q5VV67 1664 aaKnown RBP13.41□□□□□ -0.26
TMEM116-213ENST00000550831 GLI2P10070 1586 aa13.41□□□□□ -0.26
TMEM116-213ENST00000550831 CDC42BPBQ9Y5S2 1711 aa13.41□□□□□ -0.26
TMEM116-213ENST00000550831 ZCCHC11Q5TAX3 1644 aaKnown RBP13.4□□□□□ -0.26
TMEM116-213ENST00000550831 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
TMEM116-213ENST00000550831 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMEM116-213ENST00000550831 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
TMEM116-213ENST00000550831 ASXL2Q76L83 1435 aa13.38□□□□□ -0.27
TMEM116-213ENST00000550831 ARAP3Q8WWN8 1544 aa13.37□□□□□ -0.27
TMEM116-213ENST00000550831 RSPH4AQ5TD94 716 aa13.37□□□□□ -0.27
TMEM116-213ENST00000550831 DENND4BO75064 1496 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-213ENST00000550831 ADGRL1O94910 1474 aa13.36□□□□□ -0.27
TMEM116-213ENST00000550831 MBD5Q9P267 1494 aa13.36□□□□□ -0.27
TMEM116-213ENST00000550831 MYO5CQ9NQX4 1742 aa13.36□□□□□ -0.27
TMEM116-213ENST00000550831 TTC37Q6PGP7 1564 aa13.36□□□□□ -0.27
TMEM116-213ENST00000550831 SAMD9LQ8IVG5 1584 aa13.36□□□□□ -0.27
TMEM116-213ENST00000550831 MAST1Q9Y2H9 1570 aa13.36□□□□□ -0.27
TMEM116-213ENST00000550831 RRP7BPQ9NSQ0 103 aa13.35□□□□□ -0.27
TMEM116-213ENST00000550831 PLEKHH2Q8IVE3 1493 aa13.35□□□□□ -0.27
TMEM116-213ENST00000550831 KIAA1107Q9UPP5 1409 aa13.35□□□□□ -0.27
TMEM116-213ENST00000550831 ANKRD30AQ9BXX3 1397 aa13.34□□□□□ -0.27
TMEM116-213ENST00000550831 SAMD1Q6SPF0 538 aaPredicted RBP13.34□□□□□ -0.27
TMEM116-213ENST00000550831 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
TMEM116-213ENST00000550831 MAP3K4Q9Y6R4 1608 aa13.34□□□□□ -0.27
TMEM116-213ENST00000550831 CHIC2Q9UKJ5 165 aa13.33□□□□□ -0.28
TMEM116-213ENST00000550831 CCDC141Q6ZP82 1450 aa13.32□□□□□ -0.28
TMEM116-213ENST00000550831 DIEXFQ68CQ4 756 aaKnown RBP13.31□□□□□ -0.28
TMEM116-213ENST00000550831 PLCH2O75038 1416 aa13.31□□□□□ -0.28
TMEM116-213ENST00000550831 C9orf84Q5VXU9 1444 aa13.31□□□□□ -0.28
TMEM116-213ENST00000550831 KDM5DQ9BY66 1539 aa13.31□□□□□ -0.28
TMEM116-213ENST00000550831 TEX14Q8IWB6 1497 aa13.3□□□□□ -0.28
TMEM116-213ENST00000550831 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
TMEM116-213ENST00000550831 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
TMEM116-213ENST00000550831 SIN3AQ96ST3 1273 aa13.29□□□□□ -0.28
TMEM116-213ENST00000550831 HECW2Q9P2P5 1572 aa13.28□□□□□ -0.28
TMEM116-213ENST00000550831 ARHGAP5Q13017 1502 aa13.28□□□□□ -0.28
TMEM116-213ENST00000550831 PPP1R15AO75807 674 aaPredicted RBP13.28□□□□□ -0.28
TMEM116-213ENST00000550831 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
TMEM116-213ENST00000550831 MPHOSPH9Q99550 1183 aa13.28□□□□□ -0.28
TMEM116-213ENST00000550831 PLXNC1O60486 1568 aa13.28□□□□□ -0.28
TMEM116-213ENST00000550831 ANKRD50Q9ULJ7 1429 aa13.27□□□□□ -0.28
TMEM116-213ENST00000550831 PZPP20742 1482 aa13.27□□□□□ -0.28
TMEM116-213ENST00000550831 WDR7Q9Y4E6 1490 aa13.27□□□□□ -0.28
TMEM116-213ENST00000550831 ABCA9Q8IUA7 1624 aa13.27□□□□□ -0.29
TMEM116-213ENST00000550831 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
TMEM116-213ENST00000550831 ANKRD30BQ9BXX2 1392 aa13.26□□□□□ -0.29
TMEM116-213ENST00000550831 TSPY4P0CV99 314 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms