RNA–Protein interactions for RNA: ENST00000550815.1

LMBR1L-215, Transcript of limb development membrane protein 1 like, humanhuman

TSL 4

Gene LMBR1L, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-215ENST00000550815 TRIM41Q8WV44 630 aa10.82□□□□□ -0.68
LMBR1L-215ENST00000550815 ERBB3P21860 1342 aa10.81□□□□□ -0.68
LMBR1L-215ENST00000550815 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
LMBR1L-215ENST00000550815 RIMBP2O15034 1052 aa10.77□□□□□ -0.69
LMBR1L-215ENST00000550815 MICALL2Q8IY33 904 aa10.73□□□□□ -0.69
LMBR1L-215ENST00000550815 ZCCHC6Q5VYS8 1495 aaKnown RBP10.73□□□□□ -0.69
LMBR1L-215ENST00000550815 RIOK3O14730 519 aaKnown RBP10.71□□□□□ -0.69
LMBR1L-215ENST00000550815 SOX12O15370 315 aa10.71□□□□□ -0.69
LMBR1L-215ENST00000550815 VARS2Q5ST30 1063 aaKnown RBP10.71□□□□□ -0.69
LMBR1L-215ENST00000550815 DCAF1Q9Y4B6 1507 aa10.7□□□□□ -0.7
LMBR1L-215ENST00000550815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.68□□□□□ -0.7
LMBR1L-215ENST00000550815 TMEM92Q6UXU6 159 aa10.68□□□□□ -0.7
LMBR1L-215ENST00000550815 ZFP91Q96JP5 570 aaPredicted RBP10.68□□□□□ -0.7
LMBR1L-215ENST00000550815 PHF8Q9UPP1 1060 aa10.67□□□□□ -0.7
LMBR1L-215ENST00000550815 VGFO15240 615 aaPredicted RBP10.66□□□□□ -0.7
LMBR1L-215ENST00000550815 ZSWIM6Q9HCJ5 1215 aa10.66□□□□□ -0.7
LMBR1L-215ENST00000550815 MS4A4AQ96JQ5 239 aa10.65□□□□□ -0.7
LMBR1L-215ENST00000550815 RNF166Q96A37 237 aaPredicted RBP10.64□□□□□ -0.71
LMBR1L-215ENST00000550815 RNF25Q96BH1 459 aaPredicted RBP10.64□□□□□ -0.71
LMBR1L-215ENST00000550815 ZNF687Q8N1G0 1237 aa10.62□□□□□ -0.71
LMBR1L-215ENST00000550815 GPR153Q6NV75 609 aa10.61□□□□□ -0.71
LMBR1L-215ENST00000550815 MYT1LQ9UL68 1186 aa10.6□□□□□ -0.71
LMBR1L-215ENST00000550815 CUX2O14529 1486 aa10.6□□□□□ -0.71
LMBR1L-215ENST00000550815 ARSIQ5FYB1 569 aa10.59□□□□□ -0.71
LMBR1L-215ENST00000550815 ERCC6Q03468 1493 aa10.58□□□□□ -0.72
LMBR1L-215ENST00000550815 NLRP6P59044 892 aa10.58□□□□□ -0.72
LMBR1L-215ENST00000550815 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
LMBR1L-215ENST00000550815 BCL11BQ9C0K0 894 aaPredicted RBP10.54□□□□□ -0.72
LMBR1L-215ENST00000550815 ANKRD13DQ6ZTN6 518 aa10.53□□□□□ -0.72
LMBR1L-215ENST00000550815 KHSRPQ92945 711 aaKnown RBP eCLIP10.53□□□□□ -0.72
LMBR1L-215ENST00000550815 STK24Q9Y6E0 443 aa10.53□□□□□ -0.72
LMBR1L-215ENST00000550815 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
LMBR1L-215ENST00000550815 FBXO22Q8NEZ5 403 aa10.5□□□□□ -0.73
LMBR1L-215ENST00000550815 PTGER2P43116 358 aa10.49□□□□□ -0.73
LMBR1L-215ENST00000550815 STK25O00506 426 aa10.46□□□□□ -0.73
LMBR1L-215ENST00000550815 MFRPQ9BY79 579 aa10.45□□□□□ -0.74
LMBR1L-215ENST00000550815 C2orf72A6NCS6 295 aa10.44□□□□□ -0.74
LMBR1L-215ENST00000550815 NUDT7P0C024 238 aa10.43□□□□□ -0.74
LMBR1L-215ENST00000550815 LSM11P83369 360 aaKnown RBP eCLIP10.43□□□□□ -0.74
LMBR1L-215ENST00000550815 ECM2O94769 699 aaPredicted RBP10.41□□□□□ -0.74
LMBR1L-215ENST00000550815 KIF3CO14782 793 aa10.4□□□□□ -0.74
LMBR1L-215ENST00000550815 NCAPD3P42695 1498 aa10.39□□□□□ -0.75
LMBR1L-215ENST00000550815 NESP48681 1621 aa10.39□□□□□ -0.75
LMBR1L-215ENST00000550815 TMC2Q8TDI7 906 aa10.38□□□□□ -0.75
LMBR1L-215ENST00000550815 LHX6Q9UPM6 363 aa10.38□□□□□ -0.75
LMBR1L-215ENST00000550815 PBX2P40425 430 aa10.37□□□□□ -0.75
LMBR1L-215ENST00000550815 PCDHGA4Q9Y5G9 962 aa10.37□□□□□ -0.75
LMBR1L-215ENST00000550815 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
LMBR1L-215ENST00000550815 SLC34A2O95436 690 aa10.33□□□□□ -0.76
LMBR1L-215ENST00000550815 ATAD2BQ9ULI0 1458 aa10.33□□□□□ -0.76
LMBR1L-215ENST00000550815 POTEEQ6S8J3 1075 aa10.31□□□□□ -0.76
LMBR1L-215ENST00000550815 THOC2Q8NI27 1593 aaKnown RBP10.31□□□□□ -0.76
LMBR1L-215ENST00000550815 RGL2O15211 777 aa10.3□□□□□ -0.76
LMBR1L-215ENST00000550815 SMARCA2P51531 1590 aa10.3□□□□□ -0.76
LMBR1L-215ENST00000550815 HMGXB3Q12766 1538 aa10.28□□□□□ -0.76
LMBR1L-215ENST00000550815 PPP1R37O75864 691 aa10.27□□□□□ -0.77
LMBR1L-215ENST00000550815 ARHGAP33O14559 1287 aa10.26□□□□□ -0.77
LMBR1L-215ENST00000550815 HCSTQ9UBK5 93 aa10.26□□□□□ -0.77
LMBR1L-215ENST00000550815 BAZ1BQ9UIG0 1483 aaKnown RBP10.25□□□□□ -0.77
LMBR1L-215ENST00000550815 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
LMBR1L-215ENST00000550815 PKD2Q13563 968 aa10.25□□□□□ -0.77
LMBR1L-215ENST00000550815 ADGRD1Q6QNK2 874 aa10.25□□□□□ -0.77
LMBR1L-215ENST00000550815 PLA2G2EQ9NZK7 142 aa10.25□□□□□ -0.77
LMBR1L-215ENST00000550815 SMARCA4P51532 1647 aa10.25□□□□□ -0.77
LMBR1L-215ENST00000550815 KIF21AQ7Z4S6 1674 aa10.24□□□□□ -0.77
LMBR1L-215ENST00000550815 LAMC3Q9Y6N6 1575 aa10.22□□□□□ -0.77
LMBR1L-215ENST00000550815 PDS5BQ9NTI5 1447 aa10.2□□□□□ -0.78
LMBR1L-215ENST00000550815 PSEN2P49810 448 aa10.19□□□□□ -0.78
LMBR1L-215ENST00000550815 PLPP6Q8IY26 295 aa10.19□□□□□ -0.78
LMBR1L-215ENST00000550815 PTCD2Q8WV60 388 aaKnown RBP10.19□□□□□ -0.78
LMBR1L-215ENST00000550815 DMRTA1Q5VZB9 504 aa10.18□□□□□ -0.78
LMBR1L-215ENST00000550815 STAC3Q96MF2 364 aa10.18□□□□□ -0.78
LMBR1L-215ENST00000550815 TK2O00142 265 aa10.17□□□□□ -0.78
LMBR1L-215ENST00000550815 TBC1D12O60347 775 aa10.17□□□□□ -0.78
LMBR1L-215ENST00000550815 KDM4FA0A1W2PPD8 638 aa10.16□□□□□ -0.78
LMBR1L-215ENST00000550815 FOXK1P85037 733 aa10.16□□□□□ -0.78
LMBR1L-215ENST00000550815 PPP4R3BQ5MIZ7 849 aa10.16□□□□□ -0.78
LMBR1L-215ENST00000550815 BAZ1AQ9NRL2 1556 aaPredicted RBP10.15□□□□□ -0.78
LMBR1L-215ENST00000550815 KCTD12Q96CX2 325 aaKnown RBP10.14□□□□□ -0.79
LMBR1L-215ENST00000550815 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
LMBR1L-215ENST00000550815 MRC2Q9UBG0 1479 aa10.13□□□□□ -0.79
LMBR1L-215ENST00000550815 HRO43593 1189 aa10.13□□□□□ -0.79
LMBR1L-215ENST00000550815 DSG2Q14126 1118 aa10.12□□□□□ -0.79
LMBR1L-215ENST00000550815 KCNH8Q96L42 1107 aa10.12□□□□□ -0.79
LMBR1L-215ENST00000550815 PEG3Q9GZU2 1588 aa10.1□□□□□ -0.79
LMBR1L-215ENST00000550815 KCNK17Q96T54 332 aa10.1□□□□□ -0.79
LMBR1L-215ENST00000550815 WDR62O43379 1518 aa10.09□□□□□ -0.79
LMBR1L-215ENST00000550815 CADPSQ9ULU8 1353 aa10.08□□□□□ -0.8
LMBR1L-215ENST00000550815 HS6ST3Q8IZP7 471 aa10.07□□□□□ -0.8
LMBR1L-215ENST00000550815 MROH2BQ7Z745 1585 aa10.06□□□□□ -0.8
LMBR1L-215ENST00000550815 UPF1Q92900 1129 aaKnown RBP eCLIP10.06□□□□□ -0.8
LMBR1L-215ENST00000550815 CHGAP10645 457 aaKnown RBP10.04□□□□□ -0.8
LMBR1L-215ENST00000550815 PTPN5P54829 565 aa10.04□□□□□ -0.8
LMBR1L-215ENST00000550815 CEP164Q9UPV0 1460 aa10.04□□□□□ -0.8
LMBR1L-215ENST00000550815 ZNF454Q8N9F8 522 aa10.03□□□□□ -0.8
LMBR1L-215ENST00000550815 OXER1Q8TDS5 423 aa10.02□□□□□ -0.81
LMBR1L-215ENST00000550815 VPS9D1Q9Y2B5 631 aa10.02□□□□□ -0.81
LMBR1L-215ENST00000550815 RIMBP3CA6NJZ7 1639 aa10□□□□□ -0.81
LMBR1L-215ENST00000550815 RIMBP3BA6NNM3 1639 aa10□□□□□ -0.81
LMBR1L-215ENST00000550815 RIMBP3Q9UFD9 1639 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms