RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 EFCAB2Q5VUJ9 269 aa33.97■■■■□ 3.03
CACNB3-218ENST00000550771 TROQ12816 1431 aaPredicted RBP33.96■■■■□ 3.03
CACNB3-218ENST00000550771 CLIP1P30622 1438 aa33.9■■■■□ 3.02
CACNB3-218ENST00000550771 KIF14Q15058 1648 aa33.9■■■■□ 3.02
CACNB3-218ENST00000550771 MYO5CQ9NQX4 1742 aa33.89■■■■□ 3.02
CACNB3-218ENST00000550771 PCF11O94913 1555 aaKnown RBP33.87■■■■□ 3.01
CACNB3-218ENST00000550771 RIMS1Q86UR5 1692 aaKnown RBP33.87■■■■□ 3.01
CACNB3-218ENST00000550771 LMTK3Q96Q04 1460 aa33.84■■■■□ 3.01
CACNB3-218ENST00000550771 ATP10AO60312 1499 aa33.82■■■■□ 3.01
CACNB3-218ENST00000550771 SIGLEC1Q9BZZ2 1709 aa33.82■■■■□ 3
CACNB3-218ENST00000550771 CASKIN1Q8WXD9 1431 aa33.81■■■■□ 3
CACNB3-218ENST00000550771 ARHGAP5Q13017 1502 aa33.8■■■■□ 3
CACNB3-218ENST00000550771 ZNF518AQ6AHZ1 1483 aa33.8■■■■□ 3
CACNB3-218ENST00000550771 C9orf84Q5VXU9 1444 aa33.79■■■■□ 3
CACNB3-218ENST00000550771 CCDC18Q5T9S5 1454 aa33.78■■■■□ 3
CACNB3-218ENST00000550771 MLECQ14165 292 aa33.78■■■■□ 3
CACNB3-218ENST00000550771 LRRIQ1Q96JM4 1722 aa33.78■■■■□ 3
CACNB3-218ENST00000550771 AFAP1Q8N556 730 aa33.74■■■□□ 2.99
CACNB3-218ENST00000550771 KDM5CP41229 1560 aa33.72■■■□□ 2.99
CACNB3-218ENST00000550771 ARHGEF12Q9NZN5 1544 aa33.7■■■□□ 2.99
CACNB3-218ENST00000550771 PLPPR3Q6T4P5 718 aa33.7■■■□□ 2.99
CACNB3-218ENST00000550771 FER1L4A9Z1Z3 1794 aa33.67■■■□□ 2.98
CACNB3-218ENST00000550771 FYCO1Q9BQS8 1478 aa33.65■■■□□ 2.98
CACNB3-218ENST00000550771 FBXO41Q8TF61 875 aa33.65■■■□□ 2.98
CACNB3-218ENST00000550771 CDC42BPBQ9Y5S2 1711 aa33.65■■■□□ 2.98
CACNB3-218ENST00000550771 HSPA2P54652 639 aa33.63■■■□□ 2.97
CACNB3-218ENST00000550771 PREX2Q70Z35 1606 aa33.63■■■□□ 2.97
CACNB3-218ENST00000550771 MLH3Q9UHC1 1453 aa33.63■■■□□ 2.97
CACNB3-218ENST00000550771 MYT1LQ9UL68 1186 aa33.62■■■□□ 2.97
CACNB3-218ENST00000550771 ABCC1P33527 1531 aa33.6■■■□□ 2.97
CACNB3-218ENST00000550771 REREQ9P2R6 1566 aa33.59■■■□□ 2.97
CACNB3-218ENST00000550771 TRAPPC8Q9Y2L5 1435 aa33.58■■■□□ 2.97
CACNB3-218ENST00000550771 DIP2CQ9Y2E4 1556 aa33.58■■■□□ 2.97
CACNB3-218ENST00000550771 ABCA6Q8N139 1617 aa33.5■■■□□ 2.95
CACNB3-218ENST00000550771 CEBPAP49715 358 aaPredicted RBP33.5■■■□□ 2.95
CACNB3-218ENST00000550771 AGLP35573 1532 aa33.49■■■□□ 2.95
CACNB3-218ENST00000550771 ITSN2Q9NZM3 1697 aa33.49■■■□□ 2.95
CACNB3-218ENST00000550771 CDC42BPAQ5VT25 1732 aa33.49■■■□□ 2.95
CACNB3-218ENST00000550771 GPATCH8Q9UKJ3 1502 aaKnown RBP33.46■■■□□ 2.95
CACNB3-218ENST00000550771 PREX1Q8TCU6 1659 aa33.43■■■□□ 2.94
CACNB3-218ENST00000550771 ZNF777Q9ULD5 760 aaPredicted RBP33.42■■■□□ 2.94
CACNB3-218ENST00000550771 KIDINS220Q9ULH0 1771 aa33.4■■■□□ 2.94
CACNB3-218ENST00000550771 SAMD9LQ8IVG5 1584 aa33.39■■■□□ 2.94
CACNB3-218ENST00000550771 ESF1Q9H501 851 aaKnown RBP33.38■■■□□ 2.93
CACNB3-218ENST00000550771 UHRF1BP1Q6BDS2 1440 aa33.37■■■□□ 2.93
CACNB3-218ENST00000550771 KIAA1107Q9UPP5 1409 aa33.36■■■□□ 2.93
CACNB3-218ENST00000550771 CFDP1Q9UEE9 299 aaPredicted RBP33.36■■■□□ 2.93
CACNB3-218ENST00000550771 SYCP2Q9BX26 1530 aa33.35■■■□□ 2.93
CACNB3-218ENST00000550771 SETD1BQ9UPS6 1966 aaKnown RBP33.34■■■□□ 2.93
CACNB3-218ENST00000550771 SPAG9O60271 1321 aaKnown RBP33.34■■■□□ 2.93
CACNB3-218ENST00000550771 PLEKHH2Q8IVE3 1493 aa33.34■■■□□ 2.93
CACNB3-218ENST00000550771 HNRNPMP52272 730 aaKnown RBP eCLIP33.34■■■□□ 2.93
CACNB3-218ENST00000550771 MTUS2Q5JR59 1369 aa33.34■■■□□ 2.93
CACNB3-218ENST00000550771 CCNB3Q8WWL7 1395 aa33.34■■■□□ 2.93
CACNB3-218ENST00000550771 CNTLNQ9NXG0 1405 aa33.33■■■□□ 2.93
CACNB3-218ENST00000550771 DMRT2Q9Y5R5 561 aa33.29■■■□□ 2.92
CACNB3-218ENST00000550771 C3P01024 1663 aa33.29■■■□□ 2.92
CACNB3-218ENST00000550771 CERKQ8TCT0 537 aa33.28■■■□□ 2.92
CACNB3-218ENST00000550771 ATP7AQ04656 1500 aa33.23■■■□□ 2.91
CACNB3-218ENST00000550771 STRCQ7RTU9 1775 aa33.2■■■□□ 2.91
CACNB3-218ENST00000550771 EHBP1L1Q8N3D4 1523 aa33.2■■■□□ 2.91
CACNB3-218ENST00000550771 CEP162Q5TB80 1403 aa33.19■■■□□ 2.9
CACNB3-218ENST00000550771 INO80Q9ULG1 1556 aaPredicted RBP33.19■■■□□ 2.9
CACNB3-218ENST00000550771 A2MP01023 1474 aa33.18■■■□□ 2.9
CACNB3-218ENST00000550771 NPATQ14207 1427 aa33.17■■■□□ 2.9
CACNB3-218ENST00000550771 PLXNC1O60486 1568 aa33.17■■■□□ 2.9
CACNB3-218ENST00000550771 ZMYM3Q14202 1370 aa33.16■■■□□ 2.9
CACNB3-218ENST00000550771 TIAM1Q13009 1591 aa33.16■■■□□ 2.9
CACNB3-218ENST00000550771 MROH2AA6NES4 1674 aa33.13■■■□□ 2.89
CACNB3-218ENST00000550771 PTPRTO14522 1441 aa33.13■■■□□ 2.89
CACNB3-218ENST00000550771 ZNF644Q9H582 1327 aaPredicted RBP33.13■■■□□ 2.89
CACNB3-218ENST00000550771 SUPT6HQ7KZ85 1726 aaKnown RBP33.12■■■□□ 2.89
CACNB3-218ENST00000550771 MBD5Q9P267 1494 aa33.12■■■□□ 2.89
CACNB3-218ENST00000550771 PPP6R1Q9UPN7 881 aa33.08■■■□□ 2.89
CACNB3-218ENST00000550771 RTEL1-TNFRSF6BF6WH68 1400 aa33.07■■■□□ 2.88
CACNB3-218ENST00000550771 NCOA1Q15788 1441 aa33.05■■■□□ 2.88
CACNB3-218ENST00000550771 GGT6Q6P531 493 aa33.05■■■□□ 2.88
CACNB3-218ENST00000550771 ADGBQ8N7X0 1667 aa33.03■■■□□ 2.88
CACNB3-218ENST00000550771 NCOA2Q15596 1464 aa33■■■□□ 2.87
CACNB3-218ENST00000550771 CLTCQ00610 1675 aaKnown RBP33■■■□□ 2.87
CACNB3-218ENST00000550771 RSPH4AQ5TD94 716 aa32.99■■■□□ 2.87
CACNB3-218ENST00000550771 PTPRKQ15262 1439 aa32.99■■■□□ 2.87
CACNB3-218ENST00000550771 DHX29Q7Z478 1369 aaKnown RBP32.97■■■□□ 2.87
CACNB3-218ENST00000550771 CAMSAP1Q5T5Y3 1602 aa32.95■■■□□ 2.87
CACNB3-218ENST00000550771 CCDC141Q6ZP82 1450 aa32.95■■■□□ 2.87
CACNB3-218ENST00000550771 CAMSAP2Q08AD1 1489 aa32.93■■■□□ 2.86
CACNB3-218ENST00000550771 LTBP4Q8N2S1 1624 aa32.89■■■□□ 2.86
CACNB3-218ENST00000550771 MYO3AQ8NEV4 1616 aa32.88■■■□□ 2.85
CACNB3-218ENST00000550771 PLA2R1Q13018 1463 aa32.88■■■□□ 2.85
CACNB3-218ENST00000550771 VPS8Q8N3P4 1428 aa32.88■■■□□ 2.85
CACNB3-218ENST00000550771 ZNF142P52746 1687 aaPredicted RBP32.87■■■□□ 2.85
CACNB3-218ENST00000550771 KIF3BO15066 747 aa32.86■■■□□ 2.85
CACNB3-218ENST00000550771 PKD2Q13563 968 aa32.86■■■□□ 2.85
CACNB3-218ENST00000550771 CEP170BQ9Y4F5 1589 aaPredicted RBP32.86■■■□□ 2.85
CACNB3-218ENST00000550771 NCKAP5LQ9HCH0 1330 aa32.85■■■□□ 2.85
CACNB3-218ENST00000550771 LRRC9Q6ZRR7 1453 aa32.84■■■□□ 2.85
CACNB3-218ENST00000550771 IQSEC2Q5JU85 1478 aa32.83■■■□□ 2.85
CACNB3-218ENST00000550771 LOC105371045A0A1W2PR82 267 aa32.83■■■□□ 2.85
CACNB3-218ENST00000550771 ARHGEF5Q12774 1597 aa32.82■■■□□ 2.84
CACNB3-218ENST00000550771 FAM135AQ9P2D6 1515 aa32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms