RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.36□□□□□ -0.11
LETMD1-225ENST00000550715 ZFP91Q96JP5 570 aaPredicted RBP14.36□□□□□ -0.11
LETMD1-225ENST00000550715 SOCS7O14512 581 aa14.35□□□□□ -0.11
LETMD1-225ENST00000550715 ADGRL1O94910 1474 aa14.35□□□□□ -0.11
LETMD1-225ENST00000550715 CEP170Q5SW79 1584 aa14.32□□□□□ -0.12
LETMD1-225ENST00000550715 NKX1-1Q15270 411 aaPredicted RBP14.32□□□□□ -0.12
LETMD1-225ENST00000550715 STK24Q9Y6E0 443 aa14.32□□□□□ -0.12
LETMD1-225ENST00000550715 CCDC61Q9Y6R9 512 aa14.32□□□□□ -0.12
LETMD1-225ENST00000550715 BCL11BQ9C0K0 894 aaPredicted RBP14.31□□□□□ -0.12
LETMD1-225ENST00000550715 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
LETMD1-225ENST00000550715 VSIG10Q8N0Z9 540 aa14.29□□□□□ -0.12
LETMD1-225ENST00000550715 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
LETMD1-225ENST00000550715 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
LETMD1-225ENST00000550715 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
LETMD1-225ENST00000550715 PCDHB8Q9UN66 801 aa14.28□□□□□ -0.12
LETMD1-225ENST00000550715 PCDHB13Q9Y5F0 798 aa14.28□□□□□ -0.12
LETMD1-225ENST00000550715 SGIP1Q9BQI5 828 aa14.27□□□□□ -0.13
LETMD1-225ENST00000550715 ZNF467Q7Z7K2 595 aaPredicted RBP14.26□□□□□ -0.13
LETMD1-225ENST00000550715 TSPOAP1O95153 1857 aa14.26□□□□□ -0.13
LETMD1-225ENST00000550715 DIP2BQ9P265 1576 aa14.26□□□□□ -0.13
LETMD1-225ENST00000550715 KDM2AQ9Y2K7 1162 aa14.25□□□□□ -0.13
LETMD1-225ENST00000550715 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
LETMD1-225ENST00000550715 GTPBP6O43824 516 aaPredicted RBP14.2□□□□□ -0.14
LETMD1-225ENST00000550715 NUP160Q12769 1436 aa14.2□□□□□ -0.14
LETMD1-225ENST00000550715 PRG4Q92954 1404 aaPredicted RBP14.2□□□□□ -0.14
LETMD1-225ENST00000550715 MAPKBP1O60336 1514 aa14.2□□□□□ -0.14
LETMD1-225ENST00000550715 PDAP1Q13442 181 aaKnown RBP14.19□□□□□ -0.14
LETMD1-225ENST00000550715 SHROOM2Q13796 1616 aa14.19□□□□□ -0.14
LETMD1-225ENST00000550715 PBRM1Q86U86 1689 aa14.18□□□□□ -0.14
LETMD1-225ENST00000550715 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
LETMD1-225ENST00000550715 ZRANB1Q9UGI0 708 aa14.18□□□□□ -0.14
LETMD1-225ENST00000550715 MAP3K13O43283 966 aa14.17□□□□□ -0.14
LETMD1-225ENST00000550715 JPH4Q96JJ6 628 aa14.17□□□□□ -0.14
LETMD1-225ENST00000550715 DISP3Q9P2K9 1392 aa14.17□□□□□ -0.14
LETMD1-225ENST00000550715 ZNF579Q8NAF0 562 aaKnown RBP14.16□□□□□ -0.14
LETMD1-225ENST00000550715 IFNL1Q8IU54 200 aa14.15□□□□□ -0.14
LETMD1-225ENST00000550715 CUX1P39880 1505 aa14.15□□□□□ -0.14
LETMD1-225ENST00000550715 PSEN1P49768 467 aa14.14□□□□□ -0.15
LETMD1-225ENST00000550715 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
LETMD1-225ENST00000550715 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
LETMD1-225ENST00000550715 COL17A1Q9UMD9 1497 aaPredicted RBP14.13□□□□□ -0.15
LETMD1-225ENST00000550715 ADCY10Q96PN6 1610 aa14.09□□□□□ -0.15
LETMD1-225ENST00000550715 ABCA5Q8WWZ7 1642 aa14.06□□□□□ -0.16
LETMD1-225ENST00000550715 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
LETMD1-225ENST00000550715 RYDENQ9NUL5 291 aaKnown RBP14.03□□□□□ -0.16
LETMD1-225ENST00000550715 PPRC1Q5VV67 1664 aaKnown RBP14.02□□□□□ -0.16
LETMD1-225ENST00000550715 BCANQ96GW7 911 aa14.02□□□□□ -0.17
LETMD1-225ENST00000550715 ADAMTS12P58397 1594 aa14.01□□□□□ -0.17
LETMD1-225ENST00000550715 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
LETMD1-225ENST00000550715 C19orf67A6NJJ6 358 aa14.01□□□□□ -0.17
LETMD1-225ENST00000550715 CABP2Q9NPB3 220 aa14□□□□□ -0.17
LETMD1-225ENST00000550715 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
LETMD1-225ENST00000550715 MFRPQ9BY79 579 aa13.97□□□□□ -0.17
LETMD1-225ENST00000550715 EFCAB3Q8N7B9 438 aa13.96□□□□□ -0.17
LETMD1-225ENST00000550715 MS4A3Q96HJ5 214 aa13.96□□□□□ -0.17
LETMD1-225ENST00000550715 TOP2BQ02880 1626 aa13.96□□□□□ -0.17
LETMD1-225ENST00000550715 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
LETMD1-225ENST00000550715 TTBK1Q5TCY1 1321 aaPredicted RBP13.93□□□□□ -0.18
LETMD1-225ENST00000550715 ASXL2Q76L83 1435 aa13.93□□□□□ -0.18
LETMD1-225ENST00000550715 GLI2P10070 1586 aa13.92□□□□□ -0.18
LETMD1-225ENST00000550715 TMEM106CQ9BVX2 250 aa13.89□□□□□ -0.19
LETMD1-225ENST00000550715 PHF8Q9UPP1 1060 aa13.89□□□□□ -0.19
LETMD1-225ENST00000550715 PLB1Q6P1J6 1458 aa13.88□□□□□ -0.19
LETMD1-225ENST00000550715 CADPS2Q86UW7 1296 aa13.86□□□□□ -0.19
LETMD1-225ENST00000550715 PTPRGP23470 1445 aa13.86□□□□□ -0.19
LETMD1-225ENST00000550715 HAX1O00165 279 aa13.85□□□□□ -0.19
LETMD1-225ENST00000550715 HSPA2P54652 639 aa13.85□□□□□ -0.19
LETMD1-225ENST00000550715 NLRP6P59044 892 aa13.85□□□□□ -0.19
LETMD1-225ENST00000550715 FBXO22Q8NEZ5 403 aa13.85□□□□□ -0.19
LETMD1-225ENST00000550715 PTPRMP28827 1452 aa13.85□□□□□ -0.19
LETMD1-225ENST00000550715 WRNQ14191 1432 aaPredicted RBP eCLIP13.84□□□□□ -0.19
LETMD1-225ENST00000550715 SOX12O15370 315 aa13.84□□□□□ -0.19
LETMD1-225ENST00000550715 PPP1R37O75864 691 aa13.84□□□□□ -0.19
LETMD1-225ENST00000550715 RUSC2Q8N2Y8 1516 aa13.84□□□□□ -0.19
LETMD1-225ENST00000550715 ABCC2Q92887 1545 aa13.84□□□□□ -0.19
LETMD1-225ENST00000550715 ERICH3Q5RHP9 1530 aa13.82□□□□□ -0.2
LETMD1-225ENST00000550715 GOLGA2Q08379 1002 aa13.82□□□□□ -0.2
LETMD1-225ENST00000550715 TEX14Q8IWB6 1497 aa13.81□□□□□ -0.2
LETMD1-225ENST00000550715 EPRSP07814 1512 aaKnown RBP13.81□□□□□ -0.2
LETMD1-225ENST00000550715 SPATA31D1Q6ZQQ2 1576 aa13.81□□□□□ -0.2
LETMD1-225ENST00000550715 MAP3K4Q9Y6R4 1608 aa13.8□□□□□ -0.2
LETMD1-225ENST00000550715 EVX2Q03828 476 aa13.8□□□□□ -0.2
LETMD1-225ENST00000550715 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
LETMD1-225ENST00000550715 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
LETMD1-225ENST00000550715 KIF21BO75037 1637 aa13.78□□□□□ -0.2
LETMD1-225ENST00000550715 NBR1Q14596 966 aa13.76□□□□□ -0.21
LETMD1-225ENST00000550715 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
LETMD1-225ENST00000550715 KIAA0586Q9BVV6 1533 aa13.75□□□□□ -0.21
LETMD1-225ENST00000550715 TTLL13PA6NNM8 815 aa13.75□□□□□ -0.21
LETMD1-225ENST00000550715 TIE1P35590 1138 aa13.75□□□□□ -0.21
LETMD1-225ENST00000550715 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
LETMD1-225ENST00000550715 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
LETMD1-225ENST00000550715 CUL7Q14999 1698 aa13.74□□□□□ -0.21
LETMD1-225ENST00000550715 ADAMTSL3P82987 1691 aa13.73□□□□□ -0.21
LETMD1-225ENST00000550715 TNIKQ9UKE5 1360 aa13.72□□□□□ -0.21
LETMD1-225ENST00000550715 PRKCSHP14314 528 aaPredicted RBP13.72□□□□□ -0.21
LETMD1-225ENST00000550715 UHRF1BP1LA0JNW5 1464 aa13.69□□□□□ -0.22
LETMD1-225ENST00000550715 WDR70Q9NW82 654 aa13.69□□□□□ -0.22
LETMD1-225ENST00000550715 UACAQ9BZF9 1416 aa13.69□□□□□ -0.22
LETMD1-225ENST00000550715 TRIM35Q9UPQ4 493 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms