RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 POTEB3A0JP26 581 aa6.85□□□□□ -1.31
CCDC59-204ENST00000550589 HRCP23327 699 aa6.85□□□□□ -1.31
CCDC59-204ENST00000550589 POTEBQ6S5H4 581 aa6.85□□□□□ -1.31
CCDC59-204ENST00000550589 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.84□□□□□ -1.31
CCDC59-204ENST00000550589 ZFP91Q96JP5 570 aaPredicted RBP6.84□□□□□ -1.31
CCDC59-204ENST00000550589 PLCG2P16885 1265 aa6.83□□□□□ -1.32
CCDC59-204ENST00000550589 FAM9AQ8IZU1 332 aaPredicted RBP6.83□□□□□ -1.32
CCDC59-204ENST00000550589 VGFO15240 615 aaPredicted RBP6.82□□□□□ -1.32
CCDC59-204ENST00000550589 CCDC88BA6NC98 1476 aa6.81□□□□□ -1.32
CCDC59-204ENST00000550589 IRX5P78411 483 aaPredicted RBP6.8□□□□□ -1.32
CCDC59-204ENST00000550589 UNC13AQ9UPW8 1703 aa6.79□□□□□ -1.32
CCDC59-204ENST00000550589 ZEB1P37275 1124 aaPredicted RBP6.79□□□□□ -1.32
CCDC59-204ENST00000550589 CABP2Q9NPB3 220 aa6.79□□□□□ -1.32
CCDC59-204ENST00000550589 EEA1Q15075 1411 aa6.79□□□□□ -1.32
CCDC59-204ENST00000550589 PEG3Q9GZU2 1588 aa6.79□□□□□ -1.32
CCDC59-204ENST00000550589 AMER1Q5JTC6 1135 aaPredicted RBP6.79□□□□□ -1.32
CCDC59-204ENST00000550589 ILDR1Q86SU0 546 aaPredicted RBP6.78□□□□□ -1.32
CCDC59-204ENST00000550589 SMARCA2P51531 1590 aa6.78□□□□□ -1.32
CCDC59-204ENST00000550589 BICRAQ9NZM4 1560 aa6.78□□□□□ -1.32
CCDC59-204ENST00000550589 BCL11BQ9C0K0 894 aaPredicted RBP6.77□□□□□ -1.33
CCDC59-204ENST00000550589 EFCAB3Q8N7B9 438 aa6.77□□□□□ -1.33
CCDC59-204ENST00000550589 PDCD7Q8N8D1 485 aaKnown RBP6.76□□□□□ -1.33
CCDC59-204ENST00000550589 STK25O00506 426 aa6.74□□□□□ -1.33
CCDC59-204ENST00000550589 STK24Q9Y6E0 443 aa6.74□□□□□ -1.33
CCDC59-204ENST00000550589 BAZ1BQ9UIG0 1483 aaKnown RBP6.74□□□□□ -1.33
CCDC59-204ENST00000550589 ATAD2BQ9ULI0 1458 aa6.74□□□□□ -1.33
CCDC59-204ENST00000550589 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
CCDC59-204ENST00000550589 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
CCDC59-204ENST00000550589 EIF4G1Q04637 1599 aaKnown RBP6.73□□□□□ -1.33
CCDC59-204ENST00000550589 OCEL1Q9H607 264 aa6.73□□□□□ -1.33
CCDC59-204ENST00000550589 MKRN3Q13064 507 aaKnown RBP6.73□□□□□ -1.33
CCDC59-204ENST00000550589 DPY19L2Q6NUT2 758 aa6.73□□□□□ -1.33
CCDC59-204ENST00000550589 HS6ST3Q8IZP7 471 aa6.73□□□□□ -1.33
CCDC59-204ENST00000550589 MS4A4AQ96JQ5 239 aa6.72□□□□□ -1.33
CCDC59-204ENST00000550589 HCSTQ9UBK5 93 aa6.72□□□□□ -1.33
CCDC59-204ENST00000550589 WRNQ14191 1432 aaPredicted RBP eCLIP6.72□□□□□ -1.33
CCDC59-204ENST00000550589 GOLGA2Q08379 1002 aa6.71□□□□□ -1.33
CCDC59-204ENST00000550589 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.71□□□□□ -1.336e-7■■□□□ 13.5
CCDC59-204ENST00000550589 TAOK2Q9UL54 1235 aa6.71□□□□□ -1.33
CCDC59-204ENST00000550589 CHGAP10645 457 aaKnown RBP6.71□□□□□ -1.34
CCDC59-204ENST00000550589 MFRPQ9BY79 579 aa6.71□□□□□ -1.34
CCDC59-204ENST00000550589 PHF8Q9UPP1 1060 aa6.71□□□□□ -1.34
CCDC59-204ENST00000550589 NKX1-1Q15270 411 aaPredicted RBP6.7□□□□□ -1.34
CCDC59-204ENST00000550589 FBXO22Q8NEZ5 403 aa6.7□□□□□ -1.34
CCDC59-204ENST00000550589 ERBB3P21860 1342 aa6.7□□□□□ -1.34
CCDC59-204ENST00000550589 TNIKQ9UKE5 1360 aa6.69□□□□□ -1.34
CCDC59-204ENST00000550589 SOX12O15370 315 aa6.69□□□□□ -1.34
CCDC59-204ENST00000550589 UBTFP17480 764 aaKnown RBP6.69□□□□□ -1.34
CCDC59-204ENST00000550589 DNAJC5Q9H3Z4 198 aa6.69□□□□□ -1.34
CCDC59-204ENST00000550589 ABCC8Q09428 1581 aa6.68□□□□□ -1.34
CCDC59-204ENST00000550589 NCAPD3P42695 1498 aa6.67□□□□□ -1.34
CCDC59-204ENST00000550589 Q6ZNB5 142 aa6.66□□□□□ -1.34
CCDC59-204ENST00000550589 GOLGA3Q08378 1498 aa6.66□□□□□ -1.34
CCDC59-204ENST00000550589 HMGXB3Q12766 1538 aa6.65□□□□□ -1.34
CCDC59-204ENST00000550589 SOGA1O94964 1423 aa6.65□□□□□ -1.34
CCDC59-204ENST00000550589 CEP164Q9UPV0 1460 aa6.65□□□□□ -1.35
CCDC59-204ENST00000550589 CEP162Q5TB80 1403 aa6.64□□□□□ -1.35
CCDC59-204ENST00000550589 PPP1R37O75864 691 aa6.64□□□□□ -1.35
CCDC59-204ENST00000550589 NLRP6P59044 892 aa6.63□□□□□ -1.35
CCDC59-204ENST00000550589 C3orf67Q6ZVT6 689 aa6.63□□□□□ -1.35
CCDC59-204ENST00000550589 GTPBP6O43824 516 aaPredicted RBP6.61□□□□□ -1.35
CCDC59-204ENST00000550589 BOLA1Q9Y3E2 137 aa6.61□□□□□ -1.35
CCDC59-204ENST00000550589 L3MBTL3Q96JM7 780 aaPredicted RBP6.6□□□□□ -1.35
CCDC59-204ENST00000550589 MICALL2Q8IY33 904 aa6.59□□□□□ -1.35
CCDC59-204ENST00000550589 TMEM92Q6UXU6 159 aa6.58□□□□□ -1.36
CCDC59-204ENST00000550589 KIF21BO75037 1637 aa6.58□□□□□ -1.36
CCDC59-204ENST00000550589 TOP2BQ02880 1626 aa6.58□□□□□ -1.36
CCDC59-204ENST00000550589 CFTRP13569 1480 aa6.58□□□□□ -1.36
CCDC59-204ENST00000550589 HOXB1P14653 301 aaPredicted RBP6.58□□□□□ -1.36
CCDC59-204ENST00000550589 CCER1Q8TC90 406 aaPredicted RBP6.58□□□□□ -1.36
CCDC59-204ENST00000550589 SYNJ1O43426 1573 aa6.57□□□□□ -1.36
CCDC59-204ENST00000550589 PPARGC1BQ86YN6 1023 aaKnown RBP6.57□□□□□ -1.36
CCDC59-204ENST00000550589 ZNF687Q8N1G0 1237 aa6.57□□□□□ -1.36
CCDC59-204ENST00000550589 RUSC2Q8N2Y8 1516 aa6.56□□□□□ -1.36
CCDC59-204ENST00000550589 CLIP1P30622 1438 aa6.56□□□□□ -1.36
CCDC59-204ENST00000550589 KIF27Q86VH2 1401 aa6.56□□□□□ -1.36
CCDC59-204ENST00000550589 ZNF710Q8N1W2 664 aa6.56□□□□□ -1.36
CCDC59-204ENST00000550589 BBXQ8WY36 941 aaPredicted RBP6.56□□□□□ -1.36
CCDC59-204ENST00000550589 CADPSQ9ULU8 1353 aa6.54□□□□□ -1.36
CCDC59-204ENST00000550589 BIVM-ERCC5R4GMW8 1640 aa6.53□□□□□ -1.36
CCDC59-204ENST00000550589 ERICH3Q5RHP9 1530 aa6.53□□□□□ -1.36
CCDC59-204ENST00000550589 VPS8Q8N3P4 1428 aa6.53□□□□□ -1.36
CCDC59-204ENST00000550589 VARS2Q5ST30 1063 aaKnown RBP6.51□□□□□ -1.37
CCDC59-204ENST00000550589 ANKRD13DQ6ZTN6 518 aa6.51□□□□□ -1.37
CCDC59-204ENST00000550589 PRXQ9BXM0 1461 aa6.51□□□□□ -1.37
CCDC59-204ENST00000550589 RAPGEF2Q9Y4G8 1499 aa6.51□□□□□ -1.37
CCDC59-204ENST00000550589 KIF3CO14782 793 aa6.5□□□□□ -1.37
CCDC59-204ENST00000550589 LAPTM4AQ15012 233 aa6.5□□□□□ -1.37
CCDC59-204ENST00000550589 G3V3G9 751 aa6.5□□□□□ -1.37
CCDC59-204ENST00000550589 TTBK1Q5TCY1 1321 aaPredicted RBP6.48□□□□□ -1.37
CCDC59-204ENST00000550589 CUX1P39880 1505 aa6.48□□□□□ -1.37
CCDC59-204ENST00000550589 RIMBP2O15034 1052 aa6.48□□□□□ -1.37
CCDC59-204ENST00000550589 DOK7Q18PE1 504 aa6.48□□□□□ -1.37
CCDC59-204ENST00000550589 CADPS2Q86UW7 1296 aa6.48□□□□□ -1.37
CCDC59-204ENST00000550589 IFFO2Q5TF58 517 aa6.47□□□□□ -1.37
CCDC59-204ENST00000550589 RYDENQ9NUL5 291 aaKnown RBP6.47□□□□□ -1.37
CCDC59-204ENST00000550589 C2orf72A6NCS6 295 aa6.47□□□□□ -1.37
CCDC59-204ENST00000550589 HOXB3P14651 431 aaPredicted RBP6.47□□□□□ -1.37
CCDC59-204ENST00000550589 RANGAP1P46060 587 aaPredicted RBP6.46□□□□□ -1.37
CCDC59-204ENST00000550589 PAXIP1Q6ZW49 1069 aaPredicted RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms