RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 TROQ12816 1431 aaPredicted RBP30.95■■■□□ 2.54
LETMD1-224ENST00000550446 POGZQ7Z3K3 1410 aa30.95■■■□□ 2.54
LETMD1-224ENST00000550446 MAGI2Q86UL8 1455 aa30.95■■■□□ 2.54
LETMD1-224ENST00000550446 ZMYM4Q5VZL5 1548 aa30.93■■■□□ 2.54
LETMD1-224ENST00000550446 CLIP1P30622 1438 aa30.91■■■□□ 2.54
LETMD1-224ENST00000550446 AFAP1Q8N556 730 aa30.89■■■□□ 2.54
LETMD1-224ENST00000550446 KIF14Q15058 1648 aa30.88■■■□□ 2.53
LETMD1-224ENST00000550446 MYT1LQ9UL68 1186 aa30.88■■■□□ 2.53
LETMD1-224ENST00000550446 ARHGAP5Q13017 1502 aa30.84■■■□□ 2.53
LETMD1-224ENST00000550446 MYO5CQ9NQX4 1742 aa30.84■■■□□ 2.53
LETMD1-224ENST00000550446 RIMS1Q86UR5 1692 aaKnown RBP30.84■■■□□ 2.53
LETMD1-224ENST00000550446 ATP10AO60312 1499 aa30.83■■■□□ 2.53
LETMD1-224ENST00000550446 CASKIN1Q8WXD9 1431 aa30.83■■■□□ 2.53
LETMD1-224ENST00000550446 SIGLEC1Q9BZZ2 1709 aa30.79■■■□□ 2.52
LETMD1-224ENST00000550446 HSPA2P54652 639 aa30.79■■■□□ 2.52
LETMD1-224ENST00000550446 PCF11O94913 1555 aaKnown RBP30.79■■■□□ 2.52
LETMD1-224ENST00000550446 LMTK3Q96Q04 1460 aa30.78■■■□□ 2.52
LETMD1-224ENST00000550446 LRRIQ1Q96JM4 1722 aa30.77■■■□□ 2.52
LETMD1-224ENST00000550446 ZNF518AQ6AHZ1 1483 aa30.76■■■□□ 2.52
LETMD1-224ENST00000550446 C9orf84Q5VXU9 1444 aa30.76■■■□□ 2.51
LETMD1-224ENST00000550446 CCDC18Q5T9S5 1454 aa30.76■■■□□ 2.51
LETMD1-224ENST00000550446 CEBPAP49715 358 aaPredicted RBP30.71■■■□□ 2.51
LETMD1-224ENST00000550446 ZNF777Q9ULD5 760 aaPredicted RBP30.69■■■□□ 2.5
LETMD1-224ENST00000550446 FBXO41Q8TF61 875 aa30.67■■■□□ 2.5
LETMD1-224ENST00000550446 TRAPPC8Q9Y2L5 1435 aa30.65■■■□□ 2.5
LETMD1-224ENST00000550446 FYCO1Q9BQS8 1478 aa30.65■■■□□ 2.5
LETMD1-224ENST00000550446 CDC42BPBQ9Y5S2 1711 aa30.64■■■□□ 2.5
LETMD1-224ENST00000550446 ARHGEF12Q9NZN5 1544 aa30.64■■■□□ 2.5
LETMD1-224ENST00000550446 KDM5CP41229 1560 aa30.64■■■□□ 2.5
LETMD1-224ENST00000550446 FER1L4A9Z1Z3 1794 aa30.61■■■□□ 2.49
LETMD1-224ENST00000550446 MLH3Q9UHC1 1453 aa30.61■■■□□ 2.49
LETMD1-224ENST00000550446 PREX2Q70Z35 1606 aa30.58■■■□□ 2.49
LETMD1-224ENST00000550446 HNRNPMP52272 730 aaKnown RBP eCLIP30.57■■■□□ 2.48
LETMD1-224ENST00000550446 ESF1Q9H501 851 aaKnown RBP30.57■■■□□ 2.48
LETMD1-224ENST00000550446 DIP2CQ9Y2E4 1556 aa30.56■■■□□ 2.48
LETMD1-224ENST00000550446 ABCC1P33527 1531 aa30.56■■■□□ 2.48
LETMD1-224ENST00000550446 CFDP1Q9UEE9 299 aaPredicted RBP30.54■■■□□ 2.48
LETMD1-224ENST00000550446 GPATCH8Q9UKJ3 1502 aaKnown RBP30.52■■■□□ 2.48
LETMD1-224ENST00000550446 ABCA6Q8N139 1617 aa30.5■■■□□ 2.47
LETMD1-224ENST00000550446 SPAG9O60271 1321 aaKnown RBP30.49■■■□□ 2.47
LETMD1-224ENST00000550446 CDC42BPAQ5VT25 1732 aa30.49■■■□□ 2.47
LETMD1-224ENST00000550446 MTUS2Q5JR59 1369 aa30.49■■■□□ 2.47
LETMD1-224ENST00000550446 CCNB3Q8WWL7 1395 aa30.49■■■□□ 2.47
LETMD1-224ENST00000550446 ITSN2Q9NZM3 1697 aa30.47■■■□□ 2.47
LETMD1-224ENST00000550446 REREQ9P2R6 1566 aa30.47■■■□□ 2.47
LETMD1-224ENST00000550446 AGLP35573 1532 aa30.43■■■□□ 2.46
LETMD1-224ENST00000550446 SAMD9LQ8IVG5 1584 aa30.42■■■□□ 2.46
LETMD1-224ENST00000550446 SYCP2Q9BX26 1530 aa30.41■■■□□ 2.46
LETMD1-224ENST00000550446 KIDINS220Q9ULH0 1771 aa30.41■■■□□ 2.46
LETMD1-224ENST00000550446 UHRF1BP1Q6BDS2 1440 aa30.4■■■□□ 2.46
LETMD1-224ENST00000550446 CERKQ8TCT0 537 aa30.4■■■□□ 2.46
LETMD1-224ENST00000550446 KIAA1107Q9UPP5 1409 aa30.39■■■□□ 2.45
LETMD1-224ENST00000550446 DMRT2Q9Y5R5 561 aa30.38■■■□□ 2.45
LETMD1-224ENST00000550446 ZNF644Q9H582 1327 aaPredicted RBP30.38■■■□□ 2.45
LETMD1-224ENST00000550446 PREX1Q8TCU6 1659 aa30.37■■■□□ 2.45
LETMD1-224ENST00000550446 CEP162Q5TB80 1403 aa30.35■■■□□ 2.45
LETMD1-224ENST00000550446 PLEKHH2Q8IVE3 1493 aa30.35■■■□□ 2.45
LETMD1-224ENST00000550446 SETD1BQ9UPS6 1966 aaKnown RBP30.33■■■□□ 2.45
LETMD1-224ENST00000550446 CNTLNQ9NXG0 1405 aa30.32■■■□□ 2.44
LETMD1-224ENST00000550446 GGT6Q6P531 493 aa30.3■■■□□ 2.44
LETMD1-224ENST00000550446 C3P01024 1663 aa30.29■■■□□ 2.44
LETMD1-224ENST00000550446 ZMYM3Q14202 1370 aa30.28■■■□□ 2.44
LETMD1-224ENST00000550446 ATP7AQ04656 1500 aa30.27■■■□□ 2.44
LETMD1-224ENST00000550446 A2MP01023 1474 aa30.25■■■□□ 2.43
LETMD1-224ENST00000550446 LOC105371045A0A1W2PR82 267 aa30.25■■■□□ 2.43
LETMD1-224ENST00000550446 SUPT6HQ7KZ85 1726 aaKnown RBP30.22■■■□□ 2.43
LETMD1-224ENST00000550446 EHBP1L1Q8N3D4 1523 aa30.22■■■□□ 2.43
LETMD1-224ENST00000550446 STRCQ7RTU9 1775 aa30.2■■■□□ 2.43
LETMD1-224ENST00000550446 TIAM1Q13009 1591 aa30.2■■■□□ 2.43
LETMD1-224ENST00000550446 MBD5Q9P267 1494 aa30.19■■■□□ 2.42
LETMD1-224ENST00000550446 INO80Q9ULG1 1556 aaPredicted RBP30.18■■■□□ 2.42
LETMD1-224ENST00000550446 NPATQ14207 1427 aa30.16■■■□□ 2.42
LETMD1-224ENST00000550446 PTPRTO14522 1441 aa30.14■■■□□ 2.42
LETMD1-224ENST00000550446 PPP6R1Q9UPN7 881 aa30.14■■■□□ 2.42
LETMD1-224ENST00000550446 NCOA2Q15596 1464 aa30.12■■■□□ 2.41
LETMD1-224ENST00000550446 PLXNC1O60486 1568 aa30.12■■■□□ 2.41
LETMD1-224ENST00000550446 DHX29Q7Z478 1369 aaKnown RBP30.11■■■□□ 2.41
LETMD1-224ENST00000550446 RTEL1-TNFRSF6BF6WH68 1400 aa30.11■■■□□ 2.41
LETMD1-224ENST00000550446 RSPH4AQ5TD94 716 aa30.1■■■□□ 2.41
LETMD1-224ENST00000550446 KIF3BO15066 747 aa30.09■■■□□ 2.41
LETMD1-224ENST00000550446 NCOA1Q15788 1441 aa30.09■■■□□ 2.41
LETMD1-224ENST00000550446 NCKAP5LQ9HCH0 1330 aa30.09■■■□□ 2.41
LETMD1-224ENST00000550446 MROH2AA6NES4 1674 aa30.08■■■□□ 2.41
LETMD1-224ENST00000550446 CLTCQ00610 1675 aaKnown RBP30.07■■■□□ 2.41
LETMD1-224ENST00000550446 PTPRKQ15262 1439 aa30.06■■■□□ 2.4
LETMD1-224ENST00000550446 TSPY4P0CV99 314 aa30.04■■■□□ 2.4
LETMD1-224ENST00000550446 TSPY10P0CW01 314 aa30.04■■■□□ 2.4
LETMD1-224ENST00000550446 CAMSAP2Q08AD1 1489 aa30.03■■■□□ 2.4
LETMD1-224ENST00000550446 CCDC141Q6ZP82 1450 aa30.03■■■□□ 2.4
LETMD1-224ENST00000550446 ADGBQ8N7X0 1667 aa30.03■■■□□ 2.4
LETMD1-224ENST00000550446 CAMSAP1Q5T5Y3 1602 aa30.03■■■□□ 2.4
LETMD1-224ENST00000550446 VPS8Q8N3P4 1428 aa30.02■■■□□ 2.4
LETMD1-224ENST00000550446 KANK4Q5T7N3 995 aaPredicted RBP29.99■■■□□ 2.39
LETMD1-224ENST00000550446 FBXO31Q5XUX0 539 aaPredicted RBP29.98■■■□□ 2.39
LETMD1-224ENST00000550446 WASHC2CQ9Y4E1 1318 aa29.97■■■□□ 2.39
LETMD1-224ENST00000550446 PKD2Q13563 968 aa29.97■■■□□ 2.39
LETMD1-224ENST00000550446 LRRC9Q6ZRR7 1453 aa29.97■■■□□ 2.39
LETMD1-224ENST00000550446 LTBP4Q8N2S1 1624 aa29.91■■■□□ 2.38
LETMD1-224ENST00000550446 ZNF335Q9H4Z2 1342 aaPredicted RBP29.91■■■□□ 2.38
LETMD1-224ENST00000550446 CEP170BQ9Y4F5 1589 aaPredicted RBP29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms