RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 CDC42BPBQ9Y5S2 1711 aa27.48■■□□□ 1.99
CDK4-207ENST00000550419 APLP2Q06481 763 aa27.48■■□□□ 1.99
CDK4-207ENST00000550419 CDC42BPAQ5VT25 1732 aa27.47■■□□□ 1.99
CDK4-207ENST00000550419 SUPT6HQ7KZ85 1726 aaKnown RBP27.46■■□□□ 1.99
CDK4-207ENST00000550419 CCNB3Q8WWL7 1395 aa27.46■■□□□ 1.99
CDK4-207ENST00000550419 DENND4BO75064 1496 aaPredicted RBP27.45■■□□□ 1.99
CDK4-207ENST00000550419 ADGRL1O94910 1474 aa27.45■■□□□ 1.99
CDK4-207ENST00000550419 NCOA2Q15596 1464 aa27.44■■□□□ 1.98
CDK4-207ENST00000550419 KANK4Q5T7N3 995 aaPredicted RBP27.42■■□□□ 1.98
CDK4-207ENST00000550419 SCAPERQ9BY12 1400 aa27.41■■□□□ 1.98
CDK4-207ENST00000550419 FRMPD1Q5SYB0 1578 aa27.4■■□□□ 1.98
CDK4-207ENST00000550419 RAPGEF3O95398 923 aa27.4■■□□□ 1.98
CDK4-207ENST00000550419 RICTORQ6R327 1708 aa27.38■■□□□ 1.97
CDK4-207ENST00000550419 ITSN2Q9NZM3 1697 aa27.38■■□□□ 1.97
CDK4-207ENST00000550419 POGZQ7Z3K3 1410 aa27.37■■□□□ 1.97
CDK4-207ENST00000550419 CFDP1Q9UEE9 299 aaPredicted RBP27.37■■□□□ 1.97
CDK4-207ENST00000550419 ABCC1P33527 1531 aa27.35■■□□□ 1.97
CDK4-207ENST00000550419 ZMYM4Q5VZL5 1548 aa27.35■■□□□ 1.97
CDK4-207ENST00000550419 ZNF518AQ6AHZ1 1483 aa27.32■■□□□ 1.96
CDK4-207ENST00000550419 PLEKHH2Q8IVE3 1493 aa27.32■■□□□ 1.96
CDK4-207ENST00000550419 SAMD9LQ8IVG5 1584 aa27.32■■□□□ 1.96
CDK4-207ENST00000550419 AEBP2Q6ZN18 517 aaPredicted RBP27.32■■□□□ 1.96
CDK4-207ENST00000550419 KIAA1107Q9UPP5 1409 aa27.32■■□□□ 1.96
CDK4-207ENST00000550419 MAGI2Q86UL8 1455 aa27.32■■□□□ 1.96
CDK4-207ENST00000550419 ARHGEF12Q9NZN5 1544 aa27.29■■□□□ 1.96
CDK4-207ENST00000550419 KDM5CP41229 1560 aa27.27■■□□□ 1.96
CDK4-207ENST00000550419 ZNF777Q9ULD5 760 aaPredicted RBP27.27■■□□□ 1.96
CDK4-207ENST00000550419 MYOM3Q5VTT5 1437 aa27.24■■□□□ 1.95
CDK4-207ENST00000550419 MIA2Q96PC5 1412 aa27.24■■□□□ 1.95
CDK4-207ENST00000550419 TRAPPC8Q9Y2L5 1435 aa27.24■■□□□ 1.95
CDK4-207ENST00000550419 SYCP2Q9BX26 1530 aa27.23■■□□□ 1.95
CDK4-207ENST00000550419 AFAP1Q8N556 730 aa27.23■■□□□ 1.95
CDK4-207ENST00000550419 ARHGEF40Q8TER5 1519 aa27.22■■□□□ 1.95
CDK4-207ENST00000550419 MLH3Q9UHC1 1453 aa27.2■■□□□ 1.95
CDK4-207ENST00000550419 ZFYVE16Q7Z3T8 1539 aa27.2■■□□□ 1.94
CDK4-207ENST00000550419 ZNF644Q9H582 1327 aaPredicted RBP27.19■■□□□ 1.94
CDK4-207ENST00000550419 MBD5Q9P267 1494 aa27.19■■□□□ 1.94
CDK4-207ENST00000550419 HNRNPMP52272 730 aaKnown RBP eCLIP27.18■■□□□ 1.94
CDK4-207ENST00000550419 CAMSAP2Q08AD1 1489 aa27.18■■□□□ 1.94
CDK4-207ENST00000550419 HECW2Q9P2P5 1572 aa27.17■■□□□ 1.94
CDK4-207ENST00000550419 YEATS2Q9ULM3 1422 aa27.16■■□□□ 1.94
CDK4-207ENST00000550419 RSPH4AQ5TD94 716 aa27.15■■□□□ 1.94
CDK4-207ENST00000550419 ATP10AO60312 1499 aa27.11■■□□□ 1.93
CDK4-207ENST00000550419 ARHGEF5Q12774 1597 aa27.1■■□□□ 1.93
CDK4-207ENST00000550419 FGD6Q6ZV73 1430 aa27.09■■□□□ 1.93
CDK4-207ENST00000550419 SPAG9O60271 1321 aaKnown RBP27.09■■□□□ 1.93
CDK4-207ENST00000550419 CCDC141Q6ZP82 1450 aa27.08■■□□□ 1.93
CDK4-207ENST00000550419 KIDINS220Q9ULH0 1771 aa27.07■■□□□ 1.92
CDK4-207ENST00000550419 REREQ9P2R6 1566 aa27.06■■□□□ 1.92
CDK4-207ENST00000550419 INO80Q9ULG1 1556 aaPredicted RBP27.06■■□□□ 1.92
CDK4-207ENST00000550419 DIP2CQ9Y2E4 1556 aa27.06■■□□□ 1.92
CDK4-207ENST00000550419 RTEL1-TNFRSF6BF6WH68 1400 aa27.06■■□□□ 1.92
CDK4-207ENST00000550419 C9orf84Q5VXU9 1444 aa27.06■■□□□ 1.92
CDK4-207ENST00000550419 TCOF1Q13428 1488 aaKnown RBP27.06■■□□□ 1.92
CDK4-207ENST00000550419 ATP7AQ04656 1500 aa27.05■■□□□ 1.92
CDK4-207ENST00000550419 MYT1LQ9UL68 1186 aa27.04■■□□□ 1.92
CDK4-207ENST00000550419 ABCA6Q8N139 1617 aa27.04■■□□□ 1.92
CDK4-207ENST00000550419 PTPN23Q9H3S7 1636 aa27.04■■□□□ 1.92
CDK4-207ENST00000550419 KDM4FA0A1W2PPD8 638 aa27.02■■□□□ 1.92
CDK4-207ENST00000550419 ARID4BQ4LE39 1312 aaPredicted RBP26.97■■□□□ 1.91
CDK4-207ENST00000550419 TSPY4P0CV99 314 aa26.97■■□□□ 1.91
CDK4-207ENST00000550419 TSPY10P0CW01 314 aa26.97■■□□□ 1.91
CDK4-207ENST00000550419 SIGLEC1Q9BZZ2 1709 aa26.96■■□□□ 1.91
CDK4-207ENST00000550419 AGLP35573 1532 aa26.96■■□□□ 1.91
CDK4-207ENST00000550419 MAST1Q9Y2H9 1570 aa26.96■■□□□ 1.91
CDK4-207ENST00000550419 BCORL1Q5H9F3 1711 aa26.95■■□□□ 1.9
CDK4-207ENST00000550419 ADAMTSL3P82987 1691 aa26.92■■□□□ 1.9
CDK4-207ENST00000550419 SHANK2Q9UPX8 1470 aa26.92■■□□□ 1.9
CDK4-207ENST00000550419 DNMT1P26358 1616 aaKnown RBP26.91■■□□□ 1.9
CDK4-207ENST00000550419 PPARGC1BQ86YN6 1023 aaKnown RBP26.91■■□□□ 1.9
CDK4-207ENST00000550419 ADGBQ8N7X0 1667 aa26.91■■□□□ 1.9
CDK4-207ENST00000550419 ABCC5O15440 1437 aa26.9■■□□□ 1.9
CDK4-207ENST00000550419 PLXNC1O60486 1568 aa26.9■■□□□ 1.9
CDK4-207ENST00000550419 A2MP01023 1474 aa26.9■■□□□ 1.9
CDK4-207ENST00000550419 DAPK1P53355 1430 aa26.89■■□□□ 1.89
CDK4-207ENST00000550419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.88■■□□□ 1.898e-9■■■□□ 17.4
CDK4-207ENST00000550419 CROCC2H7BZ55 1655 aa26.87■■□□□ 1.89
CDK4-207ENST00000550419 DHX29Q7Z478 1369 aaKnown RBP26.85■■□□□ 1.89
CDK4-207ENST00000550419 FAM50AQ14320 339 aaKnown RBP26.84■■□□□ 1.89
CDK4-207ENST00000550419 RRBP1Q9P2E9 1410 aaKnown RBP26.81■■□□□ 1.88
CDK4-207ENST00000550419 MADDQ8WXG6 1647 aa26.8■■□□□ 1.88
CDK4-207ENST00000550419 MLECQ14165 292 aa26.78■■□□□ 1.88
CDK4-207ENST00000550419 ADGRL2O95490 1459 aa26.75■■□□□ 1.87
CDK4-207ENST00000550419 PTPRMP28827 1452 aa26.75■■□□□ 1.87
CDK4-207ENST00000550419 DUOX2Q9NRD8 1548 aa26.75■■□□□ 1.87
CDK4-207ENST00000550419 ANKRD30AQ9BXX3 1397 aa26.74■■□□□ 1.87
CDK4-207ENST00000550419 NCOA1Q15788 1441 aa26.73■■□□□ 1.87
CDK4-207ENST00000550419 PPP6R1Q9UPN7 881 aa26.73■■□□□ 1.87
CDK4-207ENST00000550419 FER1L4A9Z1Z3 1794 aa26.73■■□□□ 1.87
CDK4-207ENST00000550419 KIF15Q9NS87 1388 aa26.72■■□□□ 1.87
CDK4-207ENST00000550419 RIMS1Q86UR5 1692 aaKnown RBP26.7■■□□□ 1.87
CDK4-207ENST00000550419 EIF2AK4Q9P2K8 1649 aaKnown RBP26.7■■□□□ 1.86
CDK4-207ENST00000550419 ERBINQ96RT1 1412 aa26.69■■□□□ 1.86
CDK4-207ENST00000550419 CNTLNQ9NXG0 1405 aa26.69■■□□□ 1.86
CDK4-207ENST00000550419 PTPRKQ15262 1439 aa26.68■■□□□ 1.86
CDK4-207ENST00000550419 KIF3BO15066 747 aa26.68■■□□□ 1.86
CDK4-207ENST00000550419 CHIC2Q9UKJ5 165 aa26.68■■□□□ 1.86
CDK4-207ENST00000550419 RRP7BPQ9NSQ0 103 aa26.67■■□□□ 1.86
CDK4-207ENST00000550419 ROCK1Q13464 1354 aa26.67■■□□□ 1.86
CDK4-207ENST00000550419 FAM135AQ9P2D6 1515 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms