RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 PTPRMP28827 1452 aa11.44□□□□□ -0.58
CBX5-204ENST00000550411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.43□□□□□ -0.58
CBX5-204ENST00000550411 ARHGAP35Q9NRY4 1499 aa11.41□□□□□ -0.58
CBX5-204ENST00000550411 CDC42BPBQ9Y5S2 1711 aa11.4□□□□□ -0.58
CBX5-204ENST00000550411 HECW1Q76N89 1606 aa11.4□□□□□ -0.58
CBX5-204ENST00000550411 RAPGEF3O95398 923 aa11.4□□□□□ -0.58
CBX5-204ENST00000550411 RANGAP1P46060 587 aaPredicted RBP11.4□□□□□ -0.58
CBX5-204ENST00000550411 FOXD4L1Q9NU39 408 aa11.4□□□□□ -0.58
CBX5-204ENST00000550411 ZMYM4Q5VZL5 1548 aa11.4□□□□□ -0.59
CBX5-204ENST00000550411 PCF11O94913 1555 aaKnown RBP11.39□□□□□ -0.59
CBX5-204ENST00000550411 PREX1Q8TCU6 1659 aa11.39□□□□□ -0.59
CBX5-204ENST00000550411 FANCAO15360 1455 aa11.38□□□□□ -0.59
CBX5-204ENST00000550411 DENND4BO75064 1496 aaPredicted RBP11.38□□□□□ -0.59
CBX5-204ENST00000550411 AKNAQ7Z591 1439 aa11.38□□□□□ -0.59
CBX5-204ENST00000550411 CDK13Q14004 1512 aaKnown RBP11.38□□□□□ -0.59
CBX5-204ENST00000550411 ZFYVE16Q7Z3T8 1539 aa11.37□□□□□ -0.59
CBX5-204ENST00000550411 PLEKHD1A6NEE1 506 aa11.37□□□□□ -0.59
CBX5-204ENST00000550411 KIF14Q15058 1648 aa11.36□□□□□ -0.59
CBX5-204ENST00000550411 ARID4BQ4LE39 1312 aaPredicted RBP11.35□□□□□ -0.59
CBX5-204ENST00000550411 CDC42BPAQ5VT25 1732 aa11.35□□□□□ -0.59
CBX5-204ENST00000550411 LMTK3Q96Q04 1460 aa11.34□□□□□ -0.59
CBX5-204ENST00000550411 SUPT6HQ7KZ85 1726 aaKnown RBP11.33□□□□□ -0.6
CBX5-204ENST00000550411 ITSN2Q9NZM3 1697 aa11.33□□□□□ -0.6
CBX5-204ENST00000550411 UBTFP17480 764 aaKnown RBP11.32□□□□□ -0.6
CBX5-204ENST00000550411 POGZQ7Z3K3 1410 aa11.32□□□□□ -0.6
CBX5-204ENST00000550411 MAGI2Q86UL8 1455 aa11.32□□□□□ -0.6
CBX5-204ENST00000550411 STRCQ7RTU9 1775 aa11.31□□□□□ -0.6
CBX5-204ENST00000550411 C3P01024 1663 aa11.31□□□□□ -0.6
CBX5-204ENST00000550411 PREX2Q70Z35 1606 aa11.31□□□□□ -0.6
CBX5-204ENST00000550411 YEATS2Q9ULM3 1422 aa11.3□□□□□ -0.6
CBX5-204ENST00000550411 PLCH2O75038 1416 aa11.29□□□□□ -0.6
CBX5-204ENST00000550411 FMN1Q68DA7 1419 aa11.29□□□□□ -0.6
CBX5-204ENST00000550411 MAPK8IP2Q13387 824 aaPredicted RBP11.29□□□□□ -0.6
CBX5-204ENST00000550411 FBXO41Q8TF61 875 aa11.29□□□□□ -0.6
CBX5-204ENST00000550411 ABCA6Q8N139 1617 aa11.27□□□□□ -0.6
CBX5-204ENST00000550411 SCAPERQ9BY12 1400 aa11.27□□□□□ -0.6
CBX5-204ENST00000550411 ARHGEF12Q9NZN5 1544 aa11.27□□□□□ -0.61
CBX5-204ENST00000550411 KDM5CP41229 1560 aa11.27□□□□□ -0.61
CBX5-204ENST00000550411 KIDINS220Q9ULH0 1771 aa11.26□□□□□ -0.61
CBX5-204ENST00000550411 ARHGAP5Q13017 1502 aa11.26□□□□□ -0.61
CBX5-204ENST00000550411 CLIP1P30622 1438 aa11.26□□□□□ -0.61
CBX5-204ENST00000550411 ATP10AO60312 1499 aa11.25□□□□□ -0.61
CBX5-204ENST00000550411 DIP2CQ9Y2E4 1556 aa11.25□□□□□ -0.61
CBX5-204ENST00000550411 CASKIN1Q8WXD9 1431 aa11.25□□□□□ -0.61
CBX5-204ENST00000550411 REREQ9P2R6 1566 aa11.24□□□□□ -0.61
CBX5-204ENST00000550411 ATP1B4Q9UN42 357 aaPredicted RBP11.24□□□□□ -0.61
CBX5-204ENST00000550411 C9orf84Q5VXU9 1444 aa11.24□□□□□ -0.61
CBX5-204ENST00000550411 FYCO1Q9BQS8 1478 aa11.24□□□□□ -0.61
CBX5-204ENST00000550411 MLECQ14165 292 aa11.23□□□□□ -0.61
CBX5-204ENST00000550411 ZNF518AQ6AHZ1 1483 aa11.23□□□□□ -0.61
CBX5-204ENST00000550411 MROH2AA6NES4 1674 aa11.23□□□□□ -0.61
CBX5-204ENST00000550411 TROQ12816 1431 aaPredicted RBP11.22□□□□□ -0.61
CBX5-204ENST00000550411 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
CBX5-204ENST00000550411 CDK11AQ9UQ88 783 aaPredicted RBP11.22□□□□□ -0.61
CBX5-204ENST00000550411 ABCC1P33527 1531 aa11.21□□□□□ -0.61
CBX5-204ENST00000550411 CEP162Q5TB80 1403 aa11.21□□□□□ -0.61
CBX5-204ENST00000550411 HSPA2P54652 639 aa11.21□□□□□ -0.61
CBX5-204ENST00000550411 EFCAB2Q5VUJ9 269 aa11.21□□□□□ -0.61
CBX5-204ENST00000550411 CCDC18Q5T9S5 1454 aa11.2□□□□□ -0.62
CBX5-204ENST00000550411 CLTCQ00610 1675 aaKnown RBP11.19□□□□□ -0.62
CBX5-204ENST00000550411 ADGBQ8N7X0 1667 aa11.18□□□□□ -0.62
CBX5-204ENST00000550411 CFAP65Q6ZU64 1925 aaKnown RBP11.17□□□□□ -0.62
CBX5-204ENST00000550411 SAMD9LQ8IVG5 1584 aa11.17□□□□□ -0.62
CBX5-204ENST00000550411 AGLP35573 1532 aa11.16□□□□□ -0.62
CBX5-204ENST00000550411 MYT1LQ9UL68 1186 aa11.16□□□□□ -0.62
CBX5-204ENST00000550411 MLH3Q9UHC1 1453 aa11.16□□□□□ -0.62
CBX5-204ENST00000550411 ZNF142P52746 1687 aaPredicted RBP11.14□□□□□ -0.63
CBX5-204ENST00000550411 AFAP1Q8N556 730 aa11.14□□□□□ -0.63
CBX5-204ENST00000550411 UHRF1BP1Q6BDS2 1440 aa11.14□□□□□ -0.63
CBX5-204ENST00000550411 POLR1AO95602 1720 aaPredicted RBP11.13□□□□□ -0.63
CBX5-204ENST00000550411 CEBPAP49715 358 aaPredicted RBP11.13□□□□□ -0.63
CBX5-204ENST00000550411 CERKQ8TCT0 537 aa11.13□□□□□ -0.63
CBX5-204ENST00000550411 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
CBX5-204ENST00000550411 TRAPPC8Q9Y2L5 1435 aa11.12□□□□□ -0.63
CBX5-204ENST00000550411 SYCP2Q9BX26 1530 aa11.11□□□□□ -0.63
CBX5-204ENST00000550411 MYO3AQ8NEV4 1616 aa11.11□□□□□ -0.63
CBX5-204ENST00000550411 LOC105371045A0A1W2PR82 267 aa11.11□□□□□ -0.63
CBX5-204ENST00000550411 RTN4Q9NQC3 1192 aaKnown RBP11.11□□□□□ -0.63
CBX5-204ENST00000550411 ATP7AQ04656 1500 aa11.09□□□□□ -0.63
CBX5-204ENST00000550411 EHBP1L1Q8N3D4 1523 aa11.09□□□□□ -0.63
CBX5-204ENST00000550411 PLXNC1O60486 1568 aa11.08□□□□□ -0.64
CBX5-204ENST00000550411 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
CBX5-204ENST00000550411 ESF1Q9H501 851 aaKnown RBP11.08□□□□□ -0.64
CBX5-204ENST00000550411 DMRT2Q9Y5R5 561 aa11.08□□□□□ -0.64
CBX5-204ENST00000550411 CAMSAP1Q5T5Y3 1602 aa11.07□□□□□ -0.64
CBX5-204ENST00000550411 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
CBX5-204ENST00000550411 VPS8Q8N3P4 1428 aa11.07□□□□□ -0.64
CBX5-204ENST00000550411 CNTLNQ9NXG0 1405 aa11.07□□□□□ -0.64
CBX5-204ENST00000550411 GPATCH8Q9UKJ3 1502 aaKnown RBP11.06□□□□□ -0.64
CBX5-204ENST00000550411 PTPRTO14522 1441 aa11.06□□□□□ -0.64
CBX5-204ENST00000550411 LTBP4Q8N2S1 1624 aa11.06□□□□□ -0.64
CBX5-204ENST00000550411 PLEKHH2Q8IVE3 1493 aa11.05□□□□□ -0.64
CBX5-204ENST00000550411 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
CBX5-204ENST00000550411 AMER1Q5JTC6 1135 aaPredicted RBP11.04□□□□□ -0.64
CBX5-204ENST00000550411 ZNF777Q9ULD5 760 aaPredicted RBP11.04□□□□□ -0.64
CBX5-204ENST00000550411 CEP170BQ9Y4F5 1589 aaPredicted RBP11.03□□□□□ -0.64
CBX5-204ENST00000550411 HOXD11P31277 338 aaPredicted RBP11.03□□□□□ -0.64
CBX5-204ENST00000550411 NCOA1Q15788 1441 aa11.02□□□□□ -0.64
CBX5-204ENST00000550411 IQSEC2Q5JU85 1478 aa11.02□□□□□ -0.65
CBX5-204ENST00000550411 SPATA31D1Q6ZQQ2 1576 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms