RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 PREX2Q70Z35 1606 aa28.72■■■□□ 2.19
TUBA1A-206ENST00000550254 SCAPERQ9BY12 1400 aa28.71■■■□□ 2.19
TUBA1A-206ENST00000550254 CDC42BPAQ5VT25 1732 aa28.71■■■□□ 2.19
TUBA1A-206ENST00000550254 VPS8Q8N3P4 1428 aa28.68■■■□□ 2.18
TUBA1A-206ENST00000550254 ZMYM4Q5VZL5 1548 aa28.67■■■□□ 2.18
TUBA1A-206ENST00000550254 POGZQ7Z3K3 1410 aa28.66■■■□□ 2.18
TUBA1A-206ENST00000550254 MTUS2Q5JR59 1369 aa28.65■■■□□ 2.18
TUBA1A-206ENST00000550254 EHBP1L1Q8N3D4 1523 aa28.62■■■□□ 2.17
TUBA1A-206ENST00000550254 ARHGEF40Q8TER5 1519 aa28.62■■■□□ 2.17
TUBA1A-206ENST00000550254 GPATCH8Q9UKJ3 1502 aaKnown RBP28.62■■■□□ 2.17
TUBA1A-206ENST00000550254 TIAM1Q13009 1591 aa28.59■■■□□ 2.17
TUBA1A-206ENST00000550254 YEATS2Q9ULM3 1422 aa28.58■■■□□ 2.17
TUBA1A-206ENST00000550254 MAGI2Q86UL8 1455 aa28.58■■■□□ 2.17
TUBA1A-206ENST00000550254 ABCC1P33527 1531 aa28.57■■■□□ 2.16
TUBA1A-206ENST00000550254 ZFYVE16Q7Z3T8 1539 aa28.57■■■□□ 2.16
TUBA1A-206ENST00000550254 ARHGEF12Q9NZN5 1544 aa28.57■■■□□ 2.16
TUBA1A-206ENST00000550254 ITSN2Q9NZM3 1697 aa28.55■■■□□ 2.16
TUBA1A-206ENST00000550254 KDM5CP41229 1560 aa28.54■■■□□ 2.16
TUBA1A-206ENST00000550254 ZNF518AQ6AHZ1 1483 aa28.54■■■□□ 2.16
TUBA1A-206ENST00000550254 SAMD9LQ8IVG5 1584 aa28.54■■■□□ 2.16
TUBA1A-206ENST00000550254 CCNB3Q8WWL7 1395 aa28.53■■■□□ 2.16
TUBA1A-206ENST00000550254 AFAP1Q8N556 730 aa28.53■■■□□ 2.16
TUBA1A-206ENST00000550254 SIGLEC1Q9BZZ2 1709 aa28.51■■■□□ 2.15
TUBA1A-206ENST00000550254 TRAPPC8Q9Y2L5 1435 aa28.51■■■□□ 2.15
TUBA1A-206ENST00000550254 ZNF777Q9ULD5 760 aaPredicted RBP28.49■■■□□ 2.15
TUBA1A-206ENST00000550254 SUPT6HQ7KZ85 1726 aaKnown RBP28.49■■■□□ 2.15
TUBA1A-206ENST00000550254 BCORL1Q5H9F3 1711 aa28.48■■■□□ 2.15
TUBA1A-206ENST00000550254 ADAMTSL3P82987 1691 aa28.48■■■□□ 2.15
TUBA1A-206ENST00000550254 CFDP1Q9UEE9 299 aaPredicted RBP28.47■■■□□ 2.15
TUBA1A-206ENST00000550254 MAP3K1Q13233 1512 aa28.47■■■□□ 2.15
TUBA1A-206ENST00000550254 LRRC9Q6ZRR7 1453 aa28.46■■■□□ 2.15
TUBA1A-206ENST00000550254 NCOA2Q15596 1464 aa28.46■■■□□ 2.15
TUBA1A-206ENST00000550254 HECW2Q9P2P5 1572 aa28.45■■■□□ 2.15
TUBA1A-206ENST00000550254 ARID4BQ4LE39 1312 aaPredicted RBP28.45■■■□□ 2.15
TUBA1A-206ENST00000550254 SYCP2Q9BX26 1530 aa28.44■■■□□ 2.14
TUBA1A-206ENST00000550254 ATP10AO60312 1499 aa28.43■■■□□ 2.14
TUBA1A-206ENST00000550254 MLH3Q9UHC1 1453 aa28.43■■■□□ 2.14
TUBA1A-206ENST00000550254 KANK4Q5T7N3 995 aaPredicted RBP28.41■■■□□ 2.14
TUBA1A-206ENST00000550254 HNRNPMP52272 730 aaKnown RBP eCLIP28.4■■■□□ 2.14
TUBA1A-206ENST00000550254 KIAA1107Q9UPP5 1409 aa28.4■■■□□ 2.14
TUBA1A-206ENST00000550254 DIP2CQ9Y2E4 1556 aa28.4■■■□□ 2.14
TUBA1A-206ENST00000550254 C9orf84Q5VXU9 1444 aa28.39■■■□□ 2.14
TUBA1A-206ENST00000550254 PLEKHH2Q8IVE3 1493 aa28.39■■■□□ 2.13
TUBA1A-206ENST00000550254 KIDINS220Q9ULH0 1771 aa28.38■■■□□ 2.13
TUBA1A-206ENST00000550254 ABCA6Q8N139 1617 aa28.38■■■□□ 2.13
TUBA1A-206ENST00000550254 ZNF644Q9H582 1327 aaPredicted RBP28.38■■■□□ 2.13
TUBA1A-206ENST00000550254 MADDQ8WXG6 1647 aa28.36■■■□□ 2.13
TUBA1A-206ENST00000550254 MYT1LQ9UL68 1186 aa28.36■■■□□ 2.13
TUBA1A-206ENST00000550254 REREQ9P2R6 1566 aa28.32■■■□□ 2.12
TUBA1A-206ENST00000550254 PTPRMP28827 1452 aa28.31■■■□□ 2.12
TUBA1A-206ENST00000550254 MBD5Q9P267 1494 aa28.31■■■□□ 2.12
TUBA1A-206ENST00000550254 RIMS1Q86UR5 1692 aaKnown RBP28.29■■■□□ 2.12
TUBA1A-206ENST00000550254 MLECQ14165 292 aa28.28■■■□□ 2.12
TUBA1A-206ENST00000550254 SPAG9O60271 1321 aaKnown RBP28.27■■■□□ 2.12
TUBA1A-206ENST00000550254 INO80Q9ULG1 1556 aaPredicted RBP28.27■■■□□ 2.12
TUBA1A-206ENST00000550254 CAMSAP2Q08AD1 1489 aa28.27■■■□□ 2.12
TUBA1A-206ENST00000550254 APLP2Q06481 763 aa28.26■■■□□ 2.11
TUBA1A-206ENST00000550254 ATP7AQ04656 1500 aa28.25■■■□□ 2.11
TUBA1A-206ENST00000550254 FER1L4A9Z1Z3 1794 aa28.23■■■□□ 2.11
TUBA1A-206ENST00000550254 AGLP35573 1532 aa28.22■■■□□ 2.11
TUBA1A-206ENST00000550254 MYOM3Q5VTT5 1437 aa28.19■■■□□ 2.1
TUBA1A-206ENST00000550254 CCDC141Q6ZP82 1450 aa28.16■■■□□ 2.1
TUBA1A-206ENST00000550254 MIA2Q96PC5 1412 aa28.16■■■□□ 2.1
TUBA1A-206ENST00000550254 ARHGEF5Q12774 1597 aa28.16■■■□□ 2.1
TUBA1A-206ENST00000550254 RTEL1-TNFRSF6BF6WH68 1400 aa28.15■■■□□ 2.1
TUBA1A-206ENST00000550254 PLXNC1O60486 1568 aa28.13■■■□□ 2.09
TUBA1A-206ENST00000550254 RSPH4AQ5TD94 716 aa28.13■■■□□ 2.09
TUBA1A-206ENST00000550254 ADGBQ8N7X0 1667 aa28.13■■■□□ 2.09
TUBA1A-206ENST00000550254 A2MP01023 1474 aa28.12■■■□□ 2.09
TUBA1A-206ENST00000550254 PLPPR3Q6T4P5 718 aa28.07■■■□□ 2.08
TUBA1A-206ENST00000550254 PTPN23Q9H3S7 1636 aa28.04■■■□□ 2.08
TUBA1A-206ENST00000550254 TSPY4P0CV99 314 aa28.02■■■□□ 2.08
TUBA1A-206ENST00000550254 TSPY10P0CW01 314 aa28.02■■■□□ 2.08
TUBA1A-206ENST00000550254 MAST1Q9Y2H9 1570 aa28.02■■■□□ 2.08
TUBA1A-206ENST00000550254 CEBPAP49715 358 aaPredicted RBP28.01■■■□□ 2.07
TUBA1A-206ENST00000550254 FGD6Q6ZV73 1430 aa28.01■■■□□ 2.07
TUBA1A-206ENST00000550254 DHX29Q7Z478 1369 aaKnown RBP28■■■□□ 2.07
TUBA1A-206ENST00000550254 C3P01024 1663 aa27.99■■■□□ 2.07
TUBA1A-206ENST00000550254 TCOF1Q13428 1488 aaKnown RBP27.98■■■□□ 2.07
TUBA1A-206ENST00000550254 LMTK3Q96Q04 1460 aa27.97■■■□□ 2.07
TUBA1A-206ENST00000550254 ESF1Q9H501 851 aaKnown RBP27.95■■■□□ 2.06
TUBA1A-206ENST00000550254 CNTLNQ9NXG0 1405 aa27.94■■■□□ 2.06
TUBA1A-206ENST00000550254 CROCC2H7BZ55 1655 aa27.94■■■□□ 2.06
TUBA1A-206ENST00000550254 GGT6Q6P531 493 aa27.93■■■□□ 2.06
TUBA1A-206ENST00000550254 MROH2AA6NES4 1674 aa27.93■■■□□ 2.06
TUBA1A-206ENST00000550254 ABCC5O15440 1437 aa27.92■■■□□ 2.06
TUBA1A-206ENST00000550254 CLTCQ00610 1675 aaKnown RBP27.92■■■□□ 2.06
TUBA1A-206ENST00000550254 DNMT1P26358 1616 aaKnown RBP27.91■■■□□ 2.06
TUBA1A-206ENST00000550254 DAPK1P53355 1430 aa27.89■■■□□ 2.06
TUBA1A-206ENST00000550254 PREX1Q8TCU6 1659 aa27.88■■■□□ 2.05
TUBA1A-206ENST00000550254 KIF3BO15066 747 aa27.88■■■□□ 2.05
TUBA1A-206ENST00000550254 SHANK2Q9UPX8 1470 aa27.88■■■□□ 2.05
TUBA1A-206ENST00000550254 ZMYM3Q14202 1370 aa27.86■■■□□ 2.05
TUBA1A-206ENST00000550254 PPP6R1Q9UPN7 881 aa27.86■■■□□ 2.05
TUBA1A-206ENST00000550254 SETD1BQ9UPS6 1966 aaKnown RBP27.84■■■□□ 2.05
TUBA1A-206ENST00000550254 HSPA2P54652 639 aa27.82■■■□□ 2.04
TUBA1A-206ENST00000550254 PPARGC1BQ86YN6 1023 aaKnown RBP27.82■■■□□ 2.04
TUBA1A-206ENST00000550254 EIF2AK4Q9P2K8 1649 aaKnown RBP27.81■■■□□ 2.04
TUBA1A-206ENST00000550254 DUOX2Q9NRD8 1548 aa27.8■■■□□ 2.04
TUBA1A-206ENST00000550254 RNF17Q9BXT8 1623 aaKnown RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms