RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 PLCH2O75038 1416 aa13.38□□□□□ -0.27
ATXN2-220ENST00000550236 DENND4BO75064 1496 aaPredicted RBP13.37□□□□□ -0.27
ATXN2-220ENST00000550236 CCDC18Q5T9S5 1454 aa13.37□□□□□ -0.27
ATXN2-220ENST00000550236 CDC42BPBQ9Y5S2 1711 aa13.37□□□□□ -0.27
ATXN2-220ENST00000550236 ARID4BQ4LE39 1312 aaPredicted RBP13.37□□□□□ -0.27
ATXN2-220ENST00000550236 ARHGAP5Q13017 1502 aa13.36□□□□□ -0.27
ATXN2-220ENST00000550236 EFCAB2Q5VUJ9 269 aa13.36□□□□□ -0.27
ATXN2-220ENST00000550236 SCAPERQ9BY12 1400 aa13.36□□□□□ -0.27
ATXN2-220ENST00000550236 MYT1LQ9UL68 1186 aa13.35□□□□□ -0.27
ATXN2-220ENST00000550236 ZNF777Q9ULD5 760 aaPredicted RBP13.35□□□□□ -0.27
ATXN2-220ENST00000550236 CDC42BPAQ5VT25 1732 aa13.34□□□□□ -0.27
ATXN2-220ENST00000550236 AFAP1Q8N556 730 aa13.31□□□□□ -0.28
ATXN2-220ENST00000550236 PREX2Q70Z35 1606 aa13.31□□□□□ -0.28
ATXN2-220ENST00000550236 MTUS2Q5JR59 1369 aa13.31□□□□□ -0.28
ATXN2-220ENST00000550236 YEATS2Q9ULM3 1422 aa13.3□□□□□ -0.28
ATXN2-220ENST00000550236 MLECQ14165 292 aa13.3□□□□□ -0.28
ATXN2-220ENST00000550236 PIAS4Q8N2W9 510 aaPredicted RBP13.3□□□□□ -0.28
ATXN2-220ENST00000550236 SIGLEC1Q9BZZ2 1709 aa13.3□□□□□ -0.28
ATXN2-220ENST00000550236 ZFYVE16Q7Z3T8 1539 aa13.29□□□□□ -0.28
ATXN2-220ENST00000550236 POGZQ7Z3K3 1410 aa13.28□□□□□ -0.28
ATXN2-220ENST00000550236 ARHGEF40Q8TER5 1519 aa13.28□□□□□ -0.28
ATXN2-220ENST00000550236 BCORL1Q5H9F3 1711 aa13.27□□□□□ -0.29
ATXN2-220ENST00000550236 HNRNPMP52272 730 aaKnown RBP eCLIP13.26□□□□□ -0.292e-10■■■□□ 15.3
ATXN2-220ENST00000550236 ITSN2Q9NZM3 1697 aa13.26□□□□□ -0.29
ATXN2-220ENST00000550236 ARHGEF12Q9NZN5 1544 aa13.26□□□□□ -0.29
ATXN2-220ENST00000550236 ZMYM4Q5VZL5 1548 aa13.25□□□□□ -0.29
ATXN2-220ENST00000550236 TRAPPC8Q9Y2L5 1435 aa13.25□□□□□ -0.29
ATXN2-220ENST00000550236 CCNB3Q8WWL7 1395 aa13.25□□□□□ -0.29
ATXN2-220ENST00000550236 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
ATXN2-220ENST00000550236 RIMS1Q86UR5 1692 aaKnown RBP13.24□□□□□ -0.29
ATXN2-220ENST00000550236 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
ATXN2-220ENST00000550236 GPATCH8Q9UKJ3 1502 aaKnown RBP13.24□□□□□ -0.29
ATXN2-220ENST00000550236 CFDP1Q9UEE9 299 aaPredicted RBP13.24□□□□□ -0.29
ATXN2-220ENST00000550236 MADDQ8WXG6 1647 aa13.24□□□□□ -0.29
ATXN2-220ENST00000550236 ABCC1P33527 1531 aa13.23□□□□□ -0.29
ATXN2-220ENST00000550236 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
ATXN2-220ENST00000550236 VPS8Q8N3P4 1428 aa13.22□□□□□ -0.29
ATXN2-220ENST00000550236 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
ATXN2-220ENST00000550236 TIAM1Q13009 1591 aa13.21□□□□□ -0.29
ATXN2-220ENST00000550236 EHBP1L1Q8N3D4 1523 aa13.21□□□□□ -0.29
ATXN2-220ENST00000550236 SYCP2Q9BX26 1530 aa13.21□□□□□ -0.29
ATXN2-220ENST00000550236 ATP10AO60312 1499 aa13.21□□□□□ -0.3
ATXN2-220ENST00000550236 MAGI2Q86UL8 1455 aa13.21□□□□□ -0.3
ATXN2-220ENST00000550236 HECW2Q9P2P5 1572 aa13.2□□□□□ -0.3
ATXN2-220ENST00000550236 SUPT6HQ7KZ85 1726 aaKnown RBP13.2□□□□□ -0.3
ATXN2-220ENST00000550236 KANK4Q5T7N3 995 aaPredicted RBP13.2□□□□□ -0.3
ATXN2-220ENST00000550236 ABCA6Q8N139 1617 aa13.2□□□□□ -0.3
ATXN2-220ENST00000550236 PTPRMP28827 1452 aa13.19□□□□□ -0.3
ATXN2-220ENST00000550236 FER1L4A9Z1Z3 1794 aa13.19□□□□□ -0.3
ATXN2-220ENST00000550236 KIDINS220Q9ULH0 1771 aa13.19□□□□□ -0.3
ATXN2-220ENST00000550236 KDM5CP41229 1560 aa13.19□□□□□ -0.3
ATXN2-220ENST00000550236 DIP2CQ9Y2E4 1556 aa13.18□□□□□ -0.3
ATXN2-220ENST00000550236 NCOA2Q15596 1464 aa13.17□□□□□ -0.3
ATXN2-220ENST00000550236 C9orf84Q5VXU9 1444 aa13.17□□□□□ -0.3
ATXN2-220ENST00000550236 SPAG9O60271 1321 aaKnown RBP13.15□□□□□ -0.3
ATXN2-220ENST00000550236 CEBPAP49715 358 aaPredicted RBP13.15□□□□□ -0.3
ATXN2-220ENST00000550236 LRRC9Q6ZRR7 1453 aa13.15□□□□□ -0.3
ATXN2-220ENST00000550236 APLP2Q06481 763 aa13.14□□□□□ -0.31
ATXN2-220ENST00000550236 MLH3Q9UHC1 1453 aa13.14□□□□□ -0.31
ATXN2-220ENST00000550236 ATP7AQ04656 1500 aa13.11□□□□□ -0.31
ATXN2-220ENST00000550236 CAMSAP2Q08AD1 1489 aa13.1□□□□□ -0.31
ATXN2-220ENST00000550236 PLEKHH2Q8IVE3 1493 aa13.1□□□□□ -0.31
ATXN2-220ENST00000550236 KIAA1107Q9UPP5 1409 aa13.09□□□□□ -0.31
ATXN2-220ENST00000550236 INO80Q9ULG1 1556 aaPredicted RBP13.08□□□□□ -0.32
ATXN2-220ENST00000550236 HSPA2P54652 639 aa13.08□□□□□ -0.32
ATXN2-220ENST00000550236 ESF1Q9H501 851 aaKnown RBP13.08□□□□□ -0.32
ATXN2-220ENST00000550236 MBD5Q9P267 1494 aa13.08□□□□□ -0.32
ATXN2-220ENST00000550236 GGT6Q6P531 493 aa13.07□□□□□ -0.32
ATXN2-220ENST00000550236 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
ATXN2-220ENST00000550236 MAP3K1Q13233 1512 aa13.06□□□□□ -0.32
ATXN2-220ENST00000550236 REREQ9P2R6 1566 aa13.06□□□□□ -0.32
ATXN2-220ENST00000550236 C3P01024 1663 aa13.05□□□□□ -0.32
ATXN2-220ENST00000550236 ADGBQ8N7X0 1667 aa13.05□□□□□ -0.32
ATXN2-220ENST00000550236 A2MP01023 1474 aa13.05□□□□□ -0.32
ATXN2-220ENST00000550236 CLTCQ00610 1675 aaKnown RBP13.04□□□□□ -0.32
ATXN2-220ENST00000550236 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
ATXN2-220ENST00000550236 AGLP35573 1532 aa13.03□□□□□ -0.32
ATXN2-220ENST00000550236 MYOM3Q5VTT5 1437 aa13.03□□□□□ -0.32
ATXN2-220ENST00000550236 LMTK3Q96Q04 1460 aa13.03□□□□□ -0.32
ATXN2-220ENST00000550236 TSPY4P0CV99 314 aa13.02□□□□□ -0.33
ATXN2-220ENST00000550236 TSPY10P0CW01 314 aa13.02□□□□□ -0.33
ATXN2-220ENST00000550236 KIF3BO15066 747 aa13□□□□□ -0.33
ATXN2-220ENST00000550236 PREX1Q8TCU6 1659 aa12.99□□□□□ -0.33
ATXN2-220ENST00000550236 PTPN23Q9H3S7 1636 aa12.99□□□□□ -0.33
ATXN2-220ENST00000550236 PLXNC1O60486 1568 aa12.99□□□□□ -0.33
ATXN2-220ENST00000550236 ARHGEF5Q12774 1597 aa12.99□□□□□ -0.33
ATXN2-220ENST00000550236 RTEL1-TNFRSF6BF6WH68 1400 aa12.98□□□□□ -0.33
ATXN2-220ENST00000550236 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
ATXN2-220ENST00000550236 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
ATXN2-220ENST00000550236 DHX29Q7Z478 1369 aaKnown RBP12.97□□□□□ -0.33
ATXN2-220ENST00000550236 CHIC2Q9UKJ5 165 aa12.97□□□□□ -0.33
ATXN2-220ENST00000550236 CFAP65Q6ZU64 1925 aaKnown RBP12.97□□□□□ -0.33
ATXN2-220ENST00000550236 MIA2Q96PC5 1412 aa12.96□□□□□ -0.33
ATXN2-220ENST00000550236 ZMYM3Q14202 1370 aa12.96□□□□□ -0.33
ATXN2-220ENST00000550236 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
ATXN2-220ENST00000550236 RRP7BPQ9NSQ0 103 aa12.95□□□□□ -0.34
ATXN2-220ENST00000550236 MROH2AA6NES4 1674 aa12.95□□□□□ -0.34
ATXN2-220ENST00000550236 FGD6Q6ZV73 1430 aa12.94□□□□□ -0.34
ATXN2-220ENST00000550236 CNTLNQ9NXG0 1405 aa12.94□□□□□ -0.34
ATXN2-220ENST00000550236 CROCC2H7BZ55 1655 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms