RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 GLI2P10070 1586 aa12.43□□□□□ -0.42
GPN3-207ENST00000550228 FAM69CQ0P6D2 419 aa12.42□□□□□ -0.42
GPN3-207ENST00000550228 MIA2Q96PC5 1412 aa12.42□□□□□ -0.42
GPN3-207ENST00000550228 MAP3K4Q9Y6R4 1608 aa12.41□□□□□ -0.42
GPN3-207ENST00000550228 PLCH2O75038 1416 aa12.41□□□□□ -0.42
GPN3-207ENST00000550228 TSPOAP1O95153 1857 aa12.41□□□□□ -0.42
GPN3-207ENST00000550228 CD109Q6YHK3 1445 aa12.41□□□□□ -0.42
GPN3-207ENST00000550228 CAMSAP2Q08AD1 1489 aa12.4□□□□□ -0.42
GPN3-207ENST00000550228 TCOF1Q13428 1488 aaKnown RBP12.4□□□□□ -0.43
GPN3-207ENST00000550228 ZNF644Q9H582 1327 aaPredicted RBP12.39□□□□□ -0.43
GPN3-207ENST00000550228 SAMD9LQ8IVG5 1584 aa12.39□□□□□ -0.43
GPN3-207ENST00000550228 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
GPN3-207ENST00000550228 ARAP3Q8WWN8 1544 aa12.38□□□□□ -0.43
GPN3-207ENST00000550228 ITGAEP38570 1179 aa12.38□□□□□ -0.43
GPN3-207ENST00000550228 EFCAB2Q5VUJ9 269 aa12.37□□□□□ -0.43
GPN3-207ENST00000550228 FANCAO15360 1455 aa12.37□□□□□ -0.43
GPN3-207ENST00000550228 CFAP74Q9C0B2 1584 aa12.37□□□□□ -0.43
GPN3-207ENST00000550228 SYCP2Q9BX26 1530 aa12.36□□□□□ -0.43
GPN3-207ENST00000550228 PPRC1Q5VV67 1664 aaKnown RBP12.35□□□□□ -0.43
GPN3-207ENST00000550228 TRHP20396 242 aaPredicted RBP12.35□□□□□ -0.43
GPN3-207ENST00000550228 ABCC1P33527 1531 aa12.35□□□□□ -0.43
GPN3-207ENST00000550228 DNMT1P26358 1616 aaKnown RBP12.34□□□□□ -0.43
GPN3-207ENST00000550228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.34□□□□□ -0.43
GPN3-207ENST00000550228 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
GPN3-207ENST00000550228 ADGRL1O94910 1474 aa12.33□□□□□ -0.44
GPN3-207ENST00000550228 CROCC2H7BZ55 1655 aa12.32□□□□□ -0.44
GPN3-207ENST00000550228 DAPK1P53355 1430 aa12.32□□□□□ -0.44
GPN3-207ENST00000550228 AKNAQ7Z591 1439 aa12.32□□□□□ -0.44
GPN3-207ENST00000550228 HNRNPMP52272 730 aaKnown RBP eCLIP12.32□□□□□ -0.44
GPN3-207ENST00000550228 ARHGEF12Q9NZN5 1544 aa12.32□□□□□ -0.44
GPN3-207ENST00000550228 ARHGEF5Q12774 1597 aa12.31□□□□□ -0.44
GPN3-207ENST00000550228 TEX14Q8IWB6 1497 aa12.31□□□□□ -0.44
GPN3-207ENST00000550228 NEO1Q92859 1461 aa12.31□□□□□ -0.44
GPN3-207ENST00000550228 ABCC5O15440 1437 aa12.3□□□□□ -0.44
GPN3-207ENST00000550228 CCDC141Q6ZP82 1450 aa12.3□□□□□ -0.44
GPN3-207ENST00000550228 PTPRKQ15262 1439 aa12.29□□□□□ -0.44
GPN3-207ENST00000550228 SCAPERQ9BY12 1400 aa12.29□□□□□ -0.44
GPN3-207ENST00000550228 KIAA1107Q9UPP5 1409 aa12.29□□□□□ -0.44
GPN3-207ENST00000550228 MBD5Q9P267 1494 aa12.29□□□□□ -0.44
GPN3-207ENST00000550228 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
GPN3-207ENST00000550228 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
GPN3-207ENST00000550228 TRAPPC8Q9Y2L5 1435 aa12.28□□□□□ -0.44
GPN3-207ENST00000550228 C9orf84Q5VXU9 1444 aa12.26□□□□□ -0.45
GPN3-207ENST00000550228 SHANK2Q9UPX8 1470 aa12.26□□□□□ -0.45
GPN3-207ENST00000550228 POGZQ7Z3K3 1410 aa12.25□□□□□ -0.45
GPN3-207ENST00000550228 DENND4BO75064 1496 aaPredicted RBP12.25□□□□□ -0.45
GPN3-207ENST00000550228 TSPY4P0CV99 314 aa12.24□□□□□ -0.45
GPN3-207ENST00000550228 TSPY10P0CW01 314 aa12.24□□□□□ -0.45
GPN3-207ENST00000550228 RICTORQ6R327 1708 aa12.24□□□□□ -0.45
GPN3-207ENST00000550228 AFAP1Q8N556 730 aa12.24□□□□□ -0.45
GPN3-207ENST00000550228 RRP7BPQ9NSQ0 103 aa12.24□□□□□ -0.45
GPN3-207ENST00000550228 MAST1Q9Y2H9 1570 aa12.24□□□□□ -0.45
GPN3-207ENST00000550228 ZNF518AQ6AHZ1 1483 aa12.23□□□□□ -0.45
GPN3-207ENST00000550228 RSPH4AQ5TD94 716 aa12.23□□□□□ -0.45
GPN3-207ENST00000550228 MYT1LQ9UL68 1186 aa12.23□□□□□ -0.45
GPN3-207ENST00000550228 GCC2Q8IWJ2 1684 aa12.22□□□□□ -0.45
GPN3-207ENST00000550228 FRMPD1Q5SYB0 1578 aa12.22□□□□□ -0.45
GPN3-207ENST00000550228 SPAG9O60271 1321 aaKnown RBP12.22□□□□□ -0.45
GPN3-207ENST00000550228 RAPGEF3O95398 923 aa12.22□□□□□ -0.45
GPN3-207ENST00000550228 KDM5CP41229 1560 aa12.22□□□□□ -0.45
GPN3-207ENST00000550228 INO80Q9ULG1 1556 aaPredicted RBP12.22□□□□□ -0.45
GPN3-207ENST00000550228 ATP7AQ04656 1500 aa12.21□□□□□ -0.45
GPN3-207ENST00000550228 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.45
GPN3-207ENST00000550228 ADGRL2O95490 1459 aa12.21□□□□□ -0.45
GPN3-207ENST00000550228 HECW2Q9P2P5 1572 aa12.21□□□□□ -0.46
GPN3-207ENST00000550228 ROCK1Q13464 1354 aa12.2□□□□□ -0.46
GPN3-207ENST00000550228 ANKRD30AQ9BXX3 1397 aa12.2□□□□□ -0.46
GPN3-207ENST00000550228 PLXNC1O60486 1568 aa12.2□□□□□ -0.46
GPN3-207ENST00000550228 KIDINS220Q9ULH0 1771 aa12.19□□□□□ -0.46
GPN3-207ENST00000550228 COL17A1Q9UMD9 1497 aaPredicted RBP12.19□□□□□ -0.46
GPN3-207ENST00000550228 HFM1A2PYH4 1435 aa12.19□□□□□ -0.46
GPN3-207ENST00000550228 NAIPQ13075 1403 aa12.19□□□□□ -0.46
GPN3-207ENST00000550228 NCOA1Q15788 1441 aa12.19□□□□□ -0.46
GPN3-207ENST00000550228 SETD5Q9C0A6 1442 aa12.19□□□□□ -0.46
GPN3-207ENST00000550228 KDM6BO15054 1643 aa12.19□□□□□ -0.46
GPN3-207ENST00000550228 KIF15Q9NS87 1388 aa12.18□□□□□ -0.46
GPN3-207ENST00000550228 RTEL1-TNFRSF6BF6WH68 1400 aa12.17□□□□□ -0.46
GPN3-207ENST00000550228 RAB3GAP2Q9H2M9 1393 aa12.17□□□□□ -0.46
GPN3-207ENST00000550228 ZMYM4Q5VZL5 1548 aa12.16□□□□□ -0.46
GPN3-207ENST00000550228 ABCA6Q8N139 1617 aa12.16□□□□□ -0.46
GPN3-207ENST00000550228 MLH3Q9UHC1 1453 aa12.15□□□□□ -0.46
GPN3-207ENST00000550228 DIP2CQ9Y2E4 1556 aa12.14□□□□□ -0.47
GPN3-207ENST00000550228 YEATS2Q9ULM3 1422 aa12.14□□□□□ -0.47
GPN3-207ENST00000550228 DUOX2Q9NRD8 1548 aa12.14□□□□□ -0.47
GPN3-207ENST00000550228 ANKRD50Q9ULJ7 1429 aa12.13□□□□□ -0.47
GPN3-207ENST00000550228 ARHGEF40Q8TER5 1519 aa12.11□□□□□ -0.47
GPN3-207ENST00000550228 MAGI2Q86UL8 1455 aa12.11□□□□□ -0.47
GPN3-207ENST00000550228 A2MP01023 1474 aa12.1□□□□□ -0.47
GPN3-207ENST00000550228 ERBINQ96RT1 1412 aa12.1□□□□□ -0.47
GPN3-207ENST00000550228 TRIM52Q96A61 297 aa12.09□□□□□ -0.47
GPN3-207ENST00000550228 EIF2AK4Q9P2K8 1649 aaKnown RBP12.08□□□□□ -0.48
GPN3-207ENST00000550228 DHX29Q7Z478 1369 aaKnown RBP12.08□□□□□ -0.48
GPN3-207ENST00000550228 ATP10AO60312 1499 aa12.08□□□□□ -0.48
GPN3-207ENST00000550228 UNC13BO14795 1591 aa12.06□□□□□ -0.48
GPN3-207ENST00000550228 KIF3BO15066 747 aa12.05□□□□□ -0.48
GPN3-207ENST00000550228 HRCP23327 699 aa12.05□□□□□ -0.48
GPN3-207ENST00000550228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.05□□□□□ -0.48
GPN3-207ENST00000550228 SIGLEC1Q9BZZ2 1709 aa12.05□□□□□ -0.48
GPN3-207ENST00000550228 REREQ9P2R6 1566 aa12.04□□□□□ -0.48
GPN3-207ENST00000550228 DEPDC5O75140 1603 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms