RNA–Protein interactions for RNA: ENST00000550205.1

PXN-216, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-216ENST00000550205 CDK11AQ9UQ88 783 aaPredicted RBP16.08■□□□□ 0.16
PXN-216ENST00000550205 RIMS1Q86UR5 1692 aaKnown RBP16.07■□□□□ 0.16
PXN-216ENST00000550205 MYO5CQ9NQX4 1742 aa16.06■□□□□ 0.16
PXN-216ENST00000550205 TROQ12816 1431 aaPredicted RBP16.05■□□□□ 0.16
PXN-216ENST00000550205 EFCAB2Q5VUJ9 269 aa16.05■□□□□ 0.16
PXN-216ENST00000550205 KIF14Q15058 1648 aa16.05■□□□□ 0.16
PXN-216ENST00000550205 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
PXN-216ENST00000550205 ATP1B4Q9UN42 357 aaPredicted RBP16.04■□□□□ 0.16
PXN-216ENST00000550205 ATP10AO60312 1499 aa16.03■□□□□ 0.16
PXN-216ENST00000550205 LRRIQ1Q96JM4 1722 aa16.02■□□□□ 0.16
PXN-216ENST00000550205 CLIP1P30622 1438 aa16.02■□□□□ 0.15
PXN-216ENST00000550205 ZNF518AQ6AHZ1 1483 aa16.01■□□□□ 0.15
PXN-216ENST00000550205 C9orf84Q5VXU9 1444 aa16.01■□□□□ 0.15
PXN-216ENST00000550205 KDM5CP41229 1560 aa16■□□□□ 0.15
PXN-216ENST00000550205 FBXO41Q8TF61 875 aa16■□□□□ 0.15
PXN-216ENST00000550205 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
PXN-216ENST00000550205 CASKIN1Q8WXD9 1431 aa15.99■□□□□ 0.15
PXN-216ENST00000550205 ARHGAP5Q13017 1502 aa15.99■□□□□ 0.15
PXN-216ENST00000550205 FER1L4A9Z1Z3 1794 aa15.98■□□□□ 0.15
PXN-216ENST00000550205 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
PXN-216ENST00000550205 AFAP1Q8N556 730 aa15.96■□□□□ 0.15
PXN-216ENST00000550205 CDC42BPBQ9Y5S2 1711 aa15.95■□□□□ 0.14
PXN-216ENST00000550205 MLECQ14165 292 aa15.95■□□□□ 0.14
PXN-216ENST00000550205 REREQ9P2R6 1566 aa15.95■□□□□ 0.14
PXN-216ENST00000550205 PREX2Q70Z35 1606 aa15.94■□□□□ 0.14
PXN-216ENST00000550205 MLH3Q9UHC1 1453 aa15.94■□□□□ 0.14
PXN-216ENST00000550205 HSPA2P54652 639 aa15.93■□□□□ 0.14
PXN-216ENST00000550205 DIP2CQ9Y2E4 1556 aa15.92■□□□□ 0.14
PXN-216ENST00000550205 ABCC1P33527 1531 aa15.92■□□□□ 0.14
PXN-216ENST00000550205 FYCO1Q9BQS8 1478 aa15.91■□□□□ 0.14
PXN-216ENST00000550205 PLPPR3Q6T4P5 718 aa15.9■□□□□ 0.14
PXN-216ENST00000550205 ABCA6Q8N139 1617 aa15.89■□□□□ 0.13
PXN-216ENST00000550205 PREX1Q8TCU6 1659 aa15.89■□□□□ 0.13
PXN-216ENST00000550205 AGLP35573 1532 aa15.89■□□□□ 0.13
PXN-216ENST00000550205 TRAPPC8Q9Y2L5 1435 aa15.88■□□□□ 0.13
PXN-216ENST00000550205 ITSN2Q9NZM3 1697 aa15.88■□□□□ 0.13
PXN-216ENST00000550205 CDC42BPAQ5VT25 1732 aa15.86■□□□□ 0.13
PXN-216ENST00000550205 CEBPAP49715 358 aaPredicted RBP15.85■□□□□ 0.13
PXN-216ENST00000550205 MYT1LQ9UL68 1186 aa15.84■□□□□ 0.13
PXN-216ENST00000550205 KIDINS220Q9ULH0 1771 aa15.84■□□□□ 0.13
PXN-216ENST00000550205 GPATCH8Q9UKJ3 1502 aaKnown RBP15.84■□□□□ 0.13
PXN-216ENST00000550205 SAMD9LQ8IVG5 1584 aa15.82■□□□□ 0.12
PXN-216ENST00000550205 UHRF1BP1Q6BDS2 1440 aa15.81■□□□□ 0.12
PXN-216ENST00000550205 C3P01024 1663 aa15.8■□□□□ 0.12
PXN-216ENST00000550205 CERKQ8TCT0 537 aa15.8■□□□□ 0.12
PXN-216ENST00000550205 KIAA1107Q9UPP5 1409 aa15.79■□□□□ 0.12
PXN-216ENST00000550205 SETD1BQ9UPS6 1966 aaKnown RBP15.79■□□□□ 0.12
PXN-216ENST00000550205 STRCQ7RTU9 1775 aa15.79■□□□□ 0.12
PXN-216ENST00000550205 SYCP2Q9BX26 1530 aa15.78■□□□□ 0.12
PXN-216ENST00000550205 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
PXN-216ENST00000550205 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
PXN-216ENST00000550205 PLEKHH2Q8IVE3 1493 aa15.77■□□□□ 0.11
PXN-216ENST00000550205 ESF1Q9H501 851 aaKnown RBP15.76■□□□□ 0.11
PXN-216ENST00000550205 ZNF777Q9ULD5 760 aaPredicted RBP15.76■□□□□ 0.11
PXN-216ENST00000550205 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
PXN-216ENST00000550205 PLXNC1O60486 1568 aa15.75■□□□□ 0.11
PXN-216ENST00000550205 INO80Q9ULG1 1556 aaPredicted RBP15.75■□□□□ 0.11
PXN-216ENST00000550205 ATP7AQ04656 1500 aa15.74■□□□□ 0.11
PXN-216ENST00000550205 MROH2AA6NES4 1674 aa15.74■□□□□ 0.11
PXN-216ENST00000550205 HNRNPMP52272 730 aaKnown RBP eCLIP15.74■□□□□ 0.11
PXN-216ENST00000550205 CFDP1Q9UEE9 299 aaPredicted RBP15.74■□□□□ 0.11
PXN-216ENST00000550205 CCNB3Q8WWL7 1395 aa15.74■□□□□ 0.11
PXN-216ENST00000550205 NPATQ14207 1427 aa15.73■□□□□ 0.11
PXN-216ENST00000550205 PTPRTO14522 1441 aa15.72■□□□□ 0.11
PXN-216ENST00000550205 MTUS2Q5JR59 1369 aa15.72■□□□□ 0.11
PXN-216ENST00000550205 A2MP01023 1474 aa15.71■□□□□ 0.1
PXN-216ENST00000550205 ZMYM3Q14202 1370 aa15.7■□□□□ 0.1
PXN-216ENST00000550205 TIAM1Q13009 1591 aa15.69■□□□□ 0.1
PXN-216ENST00000550205 NCOA1Q15788 1441 aa15.68■□□□□ 0.1
PXN-216ENST00000550205 EHBP1L1Q8N3D4 1523 aa15.68■□□□□ 0.1
PXN-216ENST00000550205 SUPT6HQ7KZ85 1726 aaKnown RBP15.68■□□□□ 0.1
PXN-216ENST00000550205 MBD5Q9P267 1494 aa15.68■□□□□ 0.1
PXN-216ENST00000550205 CEP162Q5TB80 1403 aa15.68■□□□□ 0.1
PXN-216ENST00000550205 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
PXN-216ENST00000550205 ADGBQ8N7X0 1667 aa15.66■□□□□ 0.1
PXN-216ENST00000550205 ZNF644Q9H582 1327 aaPredicted RBP15.66■□□□□ 0.1
PXN-216ENST00000550205 CLTCQ00610 1675 aaKnown RBP15.65■□□□□ 0.1
PXN-216ENST00000550205 RTEL1-TNFRSF6BF6WH68 1400 aa15.65■□□□□ 0.1
PXN-216ENST00000550205 CAMSAP1Q5T5Y3 1602 aa15.64■□□□□ 0.09
PXN-216ENST00000550205 LTBP4Q8N2S1 1624 aa15.64■□□□□ 0.09
PXN-216ENST00000550205 PTPRKQ15262 1439 aa15.63■□□□□ 0.09
PXN-216ENST00000550205 ZNF142P52746 1687 aaPredicted RBP15.62■□□□□ 0.09
PXN-216ENST00000550205 MYO3AQ8NEV4 1616 aa15.61■□□□□ 0.09
PXN-216ENST00000550205 IQSEC2Q5JU85 1478 aa15.61■□□□□ 0.09
PXN-216ENST00000550205 GGT6Q6P531 493 aa15.61■□□□□ 0.09
PXN-216ENST00000550205 PLA2R1Q13018 1463 aa15.6■□□□□ 0.09
PXN-216ENST00000550205 DHX29Q7Z478 1369 aaKnown RBP15.6■□□□□ 0.09
PXN-216ENST00000550205 CEP170BQ9Y4F5 1589 aaPredicted RBP15.59■□□□□ 0.09
PXN-216ENST00000550205 NCOA2Q15596 1464 aa15.59■□□□□ 0.09
PXN-216ENST00000550205 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
PXN-216ENST00000550205 RSPH4AQ5TD94 716 aa15.58■□□□□ 0.08
PXN-216ENST00000550205 TCOF1Q13428 1488 aaKnown RBP15.58■□□□□ 0.08
PXN-216ENST00000550205 CAMSAP2Q08AD1 1489 aa15.57■□□□□ 0.08
PXN-216ENST00000550205 FAM135AQ9P2D6 1515 aa15.57■□□□□ 0.08
PXN-216ENST00000550205 PKD2Q13563 968 aa15.56■□□□□ 0.08
PXN-216ENST00000550205 NCKAP5LQ9HCH0 1330 aa15.55■□□□□ 0.08
PXN-216ENST00000550205 ARHGEF5Q12774 1597 aa15.54■□□□□ 0.08
PXN-216ENST00000550205 A2ML1A8K2U0 1454 aa15.53■□□□□ 0.08
PXN-216ENST00000550205 KDM5DQ9BY66 1539 aa15.53■□□□□ 0.08
PXN-216ENST00000550205 DNMT1P26358 1616 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms