RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 ARHGAP5Q13017 1502 aa13.84□□□□□ -0.19
CACNB3-215ENST00000550190 PLCH2O75038 1416 aa13.83□□□□□ -0.2
CACNB3-215ENST00000550190 MYOM3Q5VTT5 1437 aa13.82□□□□□ -0.2
CACNB3-215ENST00000550190 PPRC1Q5VV67 1664 aaKnown RBP13.82□□□□□ -0.2
CACNB3-215ENST00000550190 EFCAB2Q5VUJ9 269 aa13.81□□□□□ -0.2
CACNB3-215ENST00000550190 FANCAO15360 1455 aa13.8□□□□□ -0.2
CACNB3-215ENST00000550190 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
CACNB3-215ENST00000550190 FAM50AQ14320 339 aaKnown RBP13.78□□□□□ -0.2
CACNB3-215ENST00000550190 TEX14Q8IWB6 1497 aa13.78□□□□□ -0.2
CACNB3-215ENST00000550190 ARAP3Q8WWN8 1544 aa13.78□□□□□ -0.2
CACNB3-215ENST00000550190 PTPN23Q9H3S7 1636 aa13.78□□□□□ -0.2
CACNB3-215ENST00000550190 FGD6Q6ZV73 1430 aa13.77□□□□□ -0.21
CACNB3-215ENST00000550190 MIA2Q96PC5 1412 aa13.77□□□□□ -0.21
CACNB3-215ENST00000550190 ZNF644Q9H582 1327 aaPredicted RBP13.77□□□□□ -0.21
CACNB3-215ENST00000550190 SAMD9LQ8IVG5 1584 aa13.76□□□□□ -0.21
CACNB3-215ENST00000550190 AKNAQ7Z591 1439 aa13.76□□□□□ -0.21
CACNB3-215ENST00000550190 CAMSAP2Q08AD1 1489 aa13.74□□□□□ -0.21
CACNB3-215ENST00000550190 HNRNPMP52272 730 aaKnown RBP eCLIP13.74□□□□□ -0.21
CACNB3-215ENST00000550190 ADGRL1O94910 1474 aa13.74□□□□□ -0.21
CACNB3-215ENST00000550190 NEO1Q92859 1461 aa13.74□□□□□ -0.21
CACNB3-215ENST00000550190 ITGAEP38570 1179 aa13.72□□□□□ -0.21
CACNB3-215ENST00000550190 SCAPERQ9BY12 1400 aa13.72□□□□□ -0.21
CACNB3-215ENST00000550190 ABCC1P33527 1531 aa13.71□□□□□ -0.21
CACNB3-215ENST00000550190 SYCP2Q9BX26 1530 aa13.71□□□□□ -0.21
CACNB3-215ENST00000550190 PLEKHH2Q8IVE3 1493 aa13.71□□□□□ -0.21
CACNB3-215ENST00000550190 RRBP1Q9P2E9 1410 aaKnown RBP13.71□□□□□ -0.22
CACNB3-215ENST00000550190 TCOF1Q13428 1488 aaKnown RBP13.7□□□□□ -0.22
CACNB3-215ENST00000550190 MYT1LQ9UL68 1186 aa13.69□□□□□ -0.22
CACNB3-215ENST00000550190 ARHGEF12Q9NZN5 1544 aa13.69□□□□□ -0.22
CACNB3-215ENST00000550190 KDM6BO15054 1643 aa13.68□□□□□ -0.22
CACNB3-215ENST00000550190 DENND4BO75064 1496 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-215ENST00000550190 KIAA1107Q9UPP5 1409 aa13.67□□□□□ -0.22
CACNB3-215ENST00000550190 RAPGEF3O95398 923 aa13.67□□□□□ -0.22
CACNB3-215ENST00000550190 AFAP1Q8N556 730 aa13.67□□□□□ -0.22
CACNB3-215ENST00000550190 TRAPPC8Q9Y2L5 1435 aa13.66□□□□□ -0.22
CACNB3-215ENST00000550190 DNMT1P26358 1616 aaKnown RBP13.66□□□□□ -0.22
CACNB3-215ENST00000550190 RICTORQ6R327 1708 aa13.66□□□□□ -0.22
CACNB3-215ENST00000550190 ARHGEF5Q12774 1597 aa13.66□□□□□ -0.22
CACNB3-215ENST00000550190 RSPH4AQ5TD94 716 aa13.65□□□□□ -0.22
CACNB3-215ENST00000550190 MBD5Q9P267 1494 aa13.65□□□□□ -0.22
CACNB3-215ENST00000550190 DAPK1P53355 1430 aa13.64□□□□□ -0.23
CACNB3-215ENST00000550190 CCDC141Q6ZP82 1450 aa13.64□□□□□ -0.23
CACNB3-215ENST00000550190 COL17A1Q9UMD9 1497 aaPredicted RBP13.64□□□□□ -0.23
CACNB3-215ENST00000550190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.64□□□□□ -0.23
CACNB3-215ENST00000550190 TSPY4P0CV99 314 aa13.64□□□□□ -0.23
CACNB3-215ENST00000550190 TSPY10P0CW01 314 aa13.64□□□□□ -0.23
CACNB3-215ENST00000550190 TRIM26Q12899 539 aaPredicted RBP13.64□□□□□ -0.23
CACNB3-215ENST00000550190 CHIC2Q9UKJ5 165 aa13.64□□□□□ -0.23
CACNB3-215ENST00000550190 ABCC5O15440 1437 aa13.64□□□□□ -0.23
CACNB3-215ENST00000550190 POGZQ7Z3K3 1410 aa13.64□□□□□ -0.23
CACNB3-215ENST00000550190 CROCC2H7BZ55 1655 aa13.63□□□□□ -0.23
CACNB3-215ENST00000550190 ZNF518AQ6AHZ1 1483 aa13.63□□□□□ -0.23
CACNB3-215ENST00000550190 FRMPD1Q5SYB0 1578 aa13.62□□□□□ -0.23
CACNB3-215ENST00000550190 SPAG9O60271 1321 aaKnown RBP13.62□□□□□ -0.23
CACNB3-215ENST00000550190 ADGBQ8N7X0 1667 aa13.59□□□□□ -0.23
CACNB3-215ENST00000550190 KDM5CP41229 1560 aa13.59□□□□□ -0.23
CACNB3-215ENST00000550190 HECW2Q9P2P5 1572 aa13.59□□□□□ -0.23
CACNB3-215ENST00000550190 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
CACNB3-215ENST00000550190 C9orf84Q5VXU9 1444 aa13.58□□□□□ -0.24
CACNB3-215ENST00000550190 ATP7AQ04656 1500 aa13.58□□□□□ -0.24
CACNB3-215ENST00000550190 KIDINS220Q9ULH0 1771 aa13.58□□□□□ -0.24
CACNB3-215ENST00000550190 RRP7BPQ9NSQ0 103 aa13.57□□□□□ -0.24
CACNB3-215ENST00000550190 MAST1Q9Y2H9 1570 aa13.57□□□□□ -0.24
CACNB3-215ENST00000550190 SHANK2Q9UPX8 1470 aa13.56□□□□□ -0.24
CACNB3-215ENST00000550190 ZMYM4Q5VZL5 1548 aa13.56□□□□□ -0.24
CACNB3-215ENST00000550190 INO80Q9ULG1 1556 aaPredicted RBP13.56□□□□□ -0.24
CACNB3-215ENST00000550190 MLH3Q9UHC1 1453 aa13.55□□□□□ -0.24
CACNB3-215ENST00000550190 ZFYVE16Q7Z3T8 1539 aa13.55□□□□□ -0.24
CACNB3-215ENST00000550190 ANKRD30AQ9BXX3 1397 aa13.55□□□□□ -0.24
CACNB3-215ENST00000550190 RTEL1-TNFRSF6BF6WH68 1400 aa13.55□□□□□ -0.24
CACNB3-215ENST00000550190 YEATS2Q9ULM3 1422 aa13.55□□□□□ -0.24
CACNB3-215ENST00000550190 PCGF6Q9BYE7 350 aa13.54□□□□□ -0.24
CACNB3-215ENST00000550190 ABCA6Q8N139 1617 aa13.53□□□□□ -0.24
CACNB3-215ENST00000550190 MAGI2Q86UL8 1455 aa13.53□□□□□ -0.24
CACNB3-215ENST00000550190 NCOA1Q15788 1441 aa13.52□□□□□ -0.25
CACNB3-215ENST00000550190 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
CACNB3-215ENST00000550190 DIP2CQ9Y2E4 1556 aa13.52□□□□□ -0.25
CACNB3-215ENST00000550190 ADGRL2O95490 1459 aa13.51□□□□□ -0.25
CACNB3-215ENST00000550190 ROCK1Q13464 1354 aa13.5□□□□□ -0.25
CACNB3-215ENST00000550190 KIF15Q9NS87 1388 aa13.5□□□□□ -0.25
CACNB3-215ENST00000550190 ARHGEF40Q8TER5 1519 aa13.49□□□□□ -0.25
CACNB3-215ENST00000550190 ATP10AO60312 1499 aa13.49□□□□□ -0.25
CACNB3-215ENST00000550190 GCC2Q8IWJ2 1684 aa13.49□□□□□ -0.25
CACNB3-215ENST00000550190 A2MP01023 1474 aa13.48□□□□□ -0.25
CACNB3-215ENST00000550190 DUOX2Q9NRD8 1548 aa13.48□□□□□ -0.25
CACNB3-215ENST00000550190 DHX29Q7Z478 1369 aaKnown RBP13.46□□□□□ -0.25
CACNB3-215ENST00000550190 ARID4BQ4LE39 1312 aaPredicted RBP13.46□□□□□ -0.25
CACNB3-215ENST00000550190 NAIPQ13075 1403 aa13.46□□□□□ -0.26
CACNB3-215ENST00000550190 KIF3BO15066 747 aa13.45□□□□□ -0.26
CACNB3-215ENST00000550190 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
CACNB3-215ENST00000550190 SETD5Q9C0A6 1442 aa13.45□□□□□ -0.26
CACNB3-215ENST00000550190 ANKRD50Q9ULJ7 1429 aa13.45□□□□□ -0.26
CACNB3-215ENST00000550190 SIGLEC1Q9BZZ2 1709 aa13.44□□□□□ -0.26
CACNB3-215ENST00000550190 MLECQ14165 292 aa13.43□□□□□ -0.26
CACNB3-215ENST00000550190 REREQ9P2R6 1566 aa13.42□□□□□ -0.26
CACNB3-215ENST00000550190 ERBINQ96RT1 1412 aa13.42□□□□□ -0.26
CACNB3-215ENST00000550190 GGT6Q6P531 493 aa13.42□□□□□ -0.26
CACNB3-215ENST00000550190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.42□□□□□ -0.26
CACNB3-215ENST00000550190 EIF2AK4Q9P2K8 1649 aaKnown RBP13.42□□□□□ -0.26
CACNB3-215ENST00000550190 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms