RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 SCUBE2Q9NQ36 999 aa11.43□□□□□ -0.58
PFDN5-209ENST00000550069 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.42□□□□□ -0.58
PFDN5-209ENST00000550069 NCKAP5LQ9HCH0 1330 aa11.41□□□□□ -0.58
PFDN5-209ENST00000550069 SLAIN1Q8ND83 568 aa11.41□□□□□ -0.58
PFDN5-209ENST00000550069 MAMSTRQ6ZN01 415 aa11.4□□□□□ -0.58
PFDN5-209ENST00000550069 C2orf72A6NCS6 295 aa11.39□□□□□ -0.59
PFDN5-209ENST00000550069 KIF3CO14782 793 aa11.39□□□□□ -0.59
PFDN5-209ENST00000550069 CRISPLD2Q9H0B8 497 aa11.35□□□□□ -0.59
PFDN5-209ENST00000550069 HAP1P54257 671 aaPredicted RBP11.33□□□□□ -0.6
PFDN5-209ENST00000550069 DSG2Q14126 1118 aa11.31□□□□□ -0.6
PFDN5-209ENST00000550069 GPHNQ9NQX3 736 aaPredicted RBP11.3□□□□□ -0.6
PFDN5-209ENST00000550069 TMC2Q8TDI7 906 aa11.29□□□□□ -0.6
PFDN5-209ENST00000550069 HOXB3P14651 431 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-209ENST00000550069 LARP6Q9BRS8 491 aaKnown RBP11.28□□□□□ -0.6
PFDN5-209ENST00000550069 MFSD10Q14728 455 aa11.25□□□□□ -0.61
PFDN5-209ENST00000550069 LCE2DQ5TA82 110 aaPredicted RBP11.25□□□□□ -0.61
PFDN5-209ENST00000550069 KDM2AQ9Y2K7 1162 aa11.25□□□□□ -0.61
PFDN5-209ENST00000550069 FOXK1P85037 733 aa11.24□□□□□ -0.61
PFDN5-209ENST00000550069 PPP1R15BQ5SWA1 713 aa11.24□□□□□ -0.61
PFDN5-209ENST00000550069 PLPP6Q8IY26 295 aa11.24□□□□□ -0.61
PFDN5-209ENST00000550069 PDE4AP27815 886 aa11.23□□□□□ -0.61
PFDN5-209ENST00000550069 DDX27Q96GQ7 796 aaKnown RBP11.21□□□□□ -0.61
PFDN5-209ENST00000550069 KHSRPQ92945 711 aaKnown RBP eCLIP11.17□□□□□ -0.62
PFDN5-209ENST00000550069 EMILIN3Q9NT22 766 aa11.17□□□□□ -0.62
PFDN5-209ENST00000550069 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
PFDN5-209ENST00000550069 ST18O60284 1047 aa11.15□□□□□ -0.62
PFDN5-209ENST00000550069 UPF1Q92900 1129 aaKnown RBP eCLIP11.14□□□□□ -0.63
PFDN5-209ENST00000550069 CAMK2BQ13554 666 aa11.11□□□□□ -0.63
PFDN5-209ENST00000550069 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
PFDN5-209ENST00000550069 ARSIQ5FYB1 569 aa11.1□□□□□ -0.63
PFDN5-209ENST00000550069 GPR153Q6NV75 609 aa11.1□□□□□ -0.63
PFDN5-209ENST00000550069 OXER1Q8TDS5 423 aa11.1□□□□□ -0.63
PFDN5-209ENST00000550069 MARVELD3Q96A59 401 aa11.09□□□□□ -0.63
PFDN5-209ENST00000550069 PCDHGA4Q9Y5G9 962 aa11.09□□□□□ -0.63
PFDN5-209ENST00000550069 SLC34A2O95436 690 aa11.08□□□□□ -0.64
PFDN5-209ENST00000550069 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
PFDN5-209ENST00000550069 SNPHO15079 494 aa11.07□□□□□ -0.64
PFDN5-209ENST00000550069 PTCD2Q8WV60 388 aaKnown RBP11.07□□□□□ -0.64
PFDN5-209ENST00000550069 ZNF710Q8N1W2 664 aa11.06□□□□□ -0.64
PFDN5-209ENST00000550069 WDR70Q9NW82 654 aa11.06□□□□□ -0.64
PFDN5-209ENST00000550069 DPYSL4O14531 572 aa11.05□□□□□ -0.64
PFDN5-209ENST00000550069 E2F4Q16254 413 aa11.05□□□□□ -0.64
PFDN5-209ENST00000550069 VSIG10Q8N0Z9 540 aa11.05□□□□□ -0.64
PFDN5-209ENST00000550069 KDM4FA0A1W2PPD8 638 aa11.04□□□□□ -0.64
PFDN5-209ENST00000550069 NUDT7P0C024 238 aa11.04□□□□□ -0.64
PFDN5-209ENST00000550069 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
PFDN5-209ENST00000550069 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
PFDN5-209ENST00000550069 POTEB3A0JP26 581 aa11.01□□□□□ -0.65
PFDN5-209ENST00000550069 POTEBQ6S5H4 581 aa11.01□□□□□ -0.65
PFDN5-209ENST00000550069 RIMBP2O15034 1052 aa11□□□□□ -0.65
PFDN5-209ENST00000550069 ZSWIM6Q9HCJ5 1215 aa10.99□□□□□ -0.65
PFDN5-209ENST00000550069 EVI5O60447 810 aa10.96□□□□□ -0.65
PFDN5-209ENST00000550069 EMP3P54852 163 aa10.96□□□□□ -0.65
PFDN5-209ENST00000550069 MAP3K9P80192 1104 aa10.95□□□□□ -0.66
PFDN5-209ENST00000550069 LHX6Q9UPM6 363 aa10.95□□□□□ -0.66
PFDN5-209ENST00000550069 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
PFDN5-209ENST00000550069 POTEGQ6S5H5 508 aa10.94□□□□□ -0.66
PFDN5-209ENST00000550069 ARIH1Q9Y4X5 557 aaPredicted RBP10.93□□□□□ -0.66
PFDN5-209ENST00000550069 POTEMA6NI47 508 aa10.92□□□□□ -0.66
PFDN5-209ENST00000550069 PDIA6Q15084 440 aa10.92□□□□□ -0.66
PFDN5-209ENST00000550069 ZNF316A6NFI3 1004 aaPredicted RBP10.9□□□□□ -0.66
PFDN5-209ENST00000550069 TBC1D12O60347 775 aa10.9□□□□□ -0.66
PFDN5-209ENST00000550069 VARS2Q5ST30 1063 aaKnown RBP10.9□□□□□ -0.66
PFDN5-209ENST00000550069 HS3ST6Q96QI5 342 aa10.9□□□□□ -0.66
PFDN5-209ENST00000550069 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
PFDN5-209ENST00000550069 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
PFDN5-209ENST00000550069 ABCC9O60706 1549 aa10.89□□□□□ -0.67
PFDN5-209ENST00000550069 ERBB3P21860 1342 aa10.88□□□□□ -0.67
PFDN5-209ENST00000550069 DDX12PQ92771 950 aa10.87□□□□□ -0.67
PFDN5-209ENST00000550069 SEMA3EO15041 775 aa10.86□□□□□ -0.67
PFDN5-209ENST00000550069 MLLT3P42568 568 aaPredicted RBP10.86□□□□□ -0.67
PFDN5-209ENST00000550069 PRIM1P49642 420 aaKnown RBP10.86□□□□□ -0.67
PFDN5-209ENST00000550069 P3H3Q8IVL6 736 aa10.86□□□□□ -0.67
PFDN5-209ENST00000550069 POTEEQ6S8J3 1075 aa10.85□□□□□ -0.67
PFDN5-209ENST00000550069 FOSBP53539 338 aa10.83□□□□□ -0.68
PFDN5-209ENST00000550069 ZNF454Q8N9F8 522 aa10.83□□□□□ -0.68
PFDN5-209ENST00000550069 PCDHGA10Q9Y5H3 936 aa10.83□□□□□ -0.68
PFDN5-209ENST00000550069 MYO15BQ96JP2 1530 aa10.82□□□□□ -0.68
PFDN5-209ENST00000550069 SPDYE16A6NNV3 312 aaPredicted RBP10.81□□□□□ -0.68
PFDN5-209ENST00000550069 JPH4Q96JJ6 628 aa10.8□□□□□ -0.68
PFDN5-209ENST00000550069 GRXCR2A6NFK2 248 aa10.79□□□□□ -0.68
PFDN5-209ENST00000550069 PTGER2P43116 358 aa10.79□□□□□ -0.68
PFDN5-209ENST00000550069 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
PFDN5-209ENST00000550069 AXIN2Q9Y2T1 843 aa10.79□□□□□ -0.68
PFDN5-209ENST00000550069 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
PFDN5-209ENST00000550069 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
PFDN5-209ENST00000550069 OSBPP22059 807 aa10.76□□□□□ -0.69
PFDN5-209ENST00000550069 NBR1Q14596 966 aa10.76□□□□□ -0.69
PFDN5-209ENST00000550069 CDAN1Q8IWY9 1227 aa10.76□□□□□ -0.69
PFDN5-209ENST00000550069 NACADO15069 1562 aa10.76□□□□□ -0.69
PFDN5-209ENST00000550069 TESPA1A2RU30 521 aaPredicted RBP10.75□□□□□ -0.69
PFDN5-209ENST00000550069 PSEN2P49810 448 aa10.75□□□□□ -0.69
PFDN5-209ENST00000550069 ZNF687Q8N1G0 1237 aa10.75□□□□□ -0.69
PFDN5-209ENST00000550069 RBM33Q96EV2 1170 aaKnown RBP10.75□□□□□ -0.69
PFDN5-209ENST00000550069 PHF14O94880 888 aa10.74□□□□□ -0.69
PFDN5-209ENST00000550069 PPP4R3BQ5MIZ7 849 aa10.74□□□□□ -0.69
PFDN5-209ENST00000550069 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
PFDN5-209ENST00000550069 ZDHHC16Q969W1 377 aa10.73□□□□□ -0.69
PFDN5-209ENST00000550069 RB1CC1Q8TDY2 1594 aa10.73□□□□□ -0.69
PFDN5-209ENST00000550069 TSR1Q2NL82 804 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms