RNA–Protein interactions for RNA: ENST00000550018.5

PPFIA2-218, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-218ENST00000550018 MYO5CQ9NQX4 1742 aa16.56■□□□□ 0.24
PPFIA2-218ENST00000550018 POGZQ7Z3K3 1410 aa16.55■□□□□ 0.24
PPFIA2-218ENST00000550018 STRCQ7RTU9 1775 aa16.55■□□□□ 0.24
PPFIA2-218ENST00000550018 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
PPFIA2-218ENST00000550018 FAM9AQ8IZU1 332 aaPredicted RBP16.54■□□□□ 0.24
PPFIA2-218ENST00000550018 PREX1Q8TCU6 1659 aa16.53■□□□□ 0.24
PPFIA2-218ENST00000550018 MLECQ14165 292 aa16.51■□□□□ 0.23
PPFIA2-218ENST00000550018 ABCA6Q8N139 1617 aa16.5■□□□□ 0.23
PPFIA2-218ENST00000550018 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
PPFIA2-218ENST00000550018 SCAPERQ9BY12 1400 aa16.49■□□□□ 0.23
PPFIA2-218ENST00000550018 DIP2CQ9Y2E4 1556 aa16.49■□□□□ 0.23
PPFIA2-218ENST00000550018 CDC42BPBQ9Y5S2 1711 aa16.48■□□□□ 0.23
PPFIA2-218ENST00000550018 ARHGAP35Q9NRY4 1499 aa16.48■□□□□ 0.23
PPFIA2-218ENST00000550018 KDM5CP41229 1560 aa16.47■□□□□ 0.23
PPFIA2-218ENST00000550018 PLCH2O75038 1416 aa16.46■□□□□ 0.23
PPFIA2-218ENST00000550018 C3P01024 1663 aa16.46■□□□□ 0.23
PPFIA2-218ENST00000550018 PLEKHD1A6NEE1 506 aa16.45■□□□□ 0.22
PPFIA2-218ENST00000550018 CEBPAP49715 358 aaPredicted RBP16.45■□□□□ 0.22
PPFIA2-218ENST00000550018 MAGI2Q86UL8 1455 aa16.44■□□□□ 0.22
PPFIA2-218ENST00000550018 EEA1Q15075 1411 aa16.44■□□□□ 0.22
PPFIA2-218ENST00000550018 C9orf84Q5VXU9 1444 aa16.44■□□□□ 0.22
PPFIA2-218ENST00000550018 ITSN2Q9NZM3 1697 aa16.43■□□□□ 0.22
PPFIA2-218ENST00000550018 ATP10AO60312 1499 aa16.42■□□□□ 0.22
PPFIA2-218ENST00000550018 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
PPFIA2-218ENST00000550018 ARHGAP5Q13017 1502 aa16.4■□□□□ 0.22
PPFIA2-218ENST00000550018 CERKQ8TCT0 537 aa16.39■□□□□ 0.21
PPFIA2-218ENST00000550018 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.21
PPFIA2-218ENST00000550018 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
PPFIA2-218ENST00000550018 ABCC1P33527 1531 aa16.38■□□□□ 0.21
PPFIA2-218ENST00000550018 KIDINS220Q9ULH0 1771 aa16.38■□□□□ 0.21
PPFIA2-218ENST00000550018 ADRA2BP18089 450 aa16.36■□□□□ 0.21
PPFIA2-218ENST00000550018 ILDR2Q71H61 639 aa16.36■□□□□ 0.21
PPFIA2-218ENST00000550018 TRAPPC8Q9Y2L5 1435 aa16.36■□□□□ 0.21
PPFIA2-218ENST00000550018 ZNF518AQ6AHZ1 1483 aa16.35■□□□□ 0.21
PPFIA2-218ENST00000550018 REREQ9P2R6 1566 aa16.35■□□□□ 0.21
PPFIA2-218ENST00000550018 TROQ12816 1431 aaPredicted RBP16.35■□□□□ 0.21
PPFIA2-218ENST00000550018 AFAP1Q8N556 730 aa16.34■□□□□ 0.21
PPFIA2-218ENST00000550018 LTBP4Q8N2S1 1624 aa16.33■□□□□ 0.2
PPFIA2-218ENST00000550018 ATP1B4Q9UN42 357 aaPredicted RBP16.32■□□□□ 0.2
PPFIA2-218ENST00000550018 SAMD9LQ8IVG5 1584 aa16.3■□□□□ 0.2
PPFIA2-218ENST00000550018 FMN1Q68DA7 1419 aa16.3■□□□□ 0.2
PPFIA2-218ENST00000550018 SPATA31D1Q6ZQQ2 1576 aa16.3■□□□□ 0.2
PPFIA2-218ENST00000550018 UHRF1BP1Q6BDS2 1440 aa16.28■□□□□ 0.2
PPFIA2-218ENST00000550018 SUPT6HQ7KZ85 1726 aaKnown RBP16.28■□□□□ 0.2
PPFIA2-218ENST00000550018 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.2
PPFIA2-218ENST00000550018 MLH3Q9UHC1 1453 aa16.27■□□□□ 0.19
PPFIA2-218ENST00000550018 AGLP35573 1532 aa16.26■□□□□ 0.19
PPFIA2-218ENST00000550018 SYCP2Q9BX26 1530 aa16.26■□□□□ 0.19
PPFIA2-218ENST00000550018 EFCAB2Q5VUJ9 269 aa16.26■□□□□ 0.19
PPFIA2-218ENST00000550018 CLTCQ00610 1675 aaKnown RBP16.25■□□□□ 0.19
PPFIA2-218ENST00000550018 SETD1BQ9UPS6 1966 aaKnown RBP16.25■□□□□ 0.19
PPFIA2-218ENST00000550018 MYO3AQ8NEV4 1616 aa16.24■□□□□ 0.19
PPFIA2-218ENST00000550018 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
PPFIA2-218ENST00000550018 MROH2AA6NES4 1674 aa16.24■□□□□ 0.19
PPFIA2-218ENST00000550018 INO80Q9ULG1 1556 aaPredicted RBP16.23■□□□□ 0.19
PPFIA2-218ENST00000550018 UBTFP17480 764 aaKnown RBP16.23■□□□□ 0.19
PPFIA2-218ENST00000550018 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
PPFIA2-218ENST00000550018 NCOA1Q15788 1441 aa16.22■□□□□ 0.19
PPFIA2-218ENST00000550018 ZNF142P52746 1687 aaPredicted RBP16.22■□□□□ 0.19
PPFIA2-218ENST00000550018 PLXNC1O60486 1568 aa16.21■□□□□ 0.19
PPFIA2-218ENST00000550018 CLIP1P30622 1438 aa16.21■□□□□ 0.19
PPFIA2-218ENST00000550018 PTPRTO14522 1441 aa16.19■□□□□ 0.18
PPFIA2-218ENST00000550018 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
PPFIA2-218ENST00000550018 ATP7AQ04656 1500 aa16.17■□□□□ 0.18
PPFIA2-218ENST00000550018 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
PPFIA2-218ENST00000550018 MYT1LQ9UL68 1186 aa16.16■□□□□ 0.18
PPFIA2-218ENST00000550018 GPATCH8Q9UKJ3 1502 aaKnown RBP16.15■□□□□ 0.18
PPFIA2-218ENST00000550018 ADGBQ8N7X0 1667 aa16.14■□□□□ 0.18
PPFIA2-218ENST00000550018 CEP170BQ9Y4F5 1589 aaPredicted RBP16.14■□□□□ 0.17
PPFIA2-218ENST00000550018 MSH5O43196 834 aa16.14■□□□□ 0.17
PPFIA2-218ENST00000550018 FYCO1Q9BQS8 1478 aa16.14■□□□□ 0.17
PPFIA2-218ENST00000550018 ZNF335Q9H4Z2 1342 aaPredicted RBP16.12■□□□□ 0.17
PPFIA2-218ENST00000550018 TIAM1Q13009 1591 aa16.11■□□□□ 0.17
PPFIA2-218ENST00000550018 NCKAP5LQ9HCH0 1330 aa16.11■□□□□ 0.17
PPFIA2-218ENST00000550018 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
PPFIA2-218ENST00000550018 NEURL4Q96JN8 1562 aa16.09■□□□□ 0.17
PPFIA2-218ENST00000550018 PTPRKQ15262 1439 aa16.09■□□□□ 0.17
PPFIA2-218ENST00000550018 CNTLNQ9NXG0 1405 aa16.09■□□□□ 0.17
PPFIA2-218ENST00000550018 SOCS7O14512 581 aa16.08■□□□□ 0.16
PPFIA2-218ENST00000550018 HNRNPMP52272 730 aaKnown RBP eCLIP16.08■□□□□ 0.16
PPFIA2-218ENST00000550018 ZNF777Q9ULD5 760 aaPredicted RBP16.08■□□□□ 0.16
PPFIA2-218ENST00000550018 NPATQ14207 1427 aa16.08■□□□□ 0.16
PPFIA2-218ENST00000550018 TCOF1Q13428 1488 aaKnown RBP16.08■□□□□ 0.16
PPFIA2-218ENST00000550018 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.16
PPFIA2-218ENST00000550018 ZMYM3Q14202 1370 aa16.07■□□□□ 0.16
PPFIA2-218ENST00000550018 IQSEC2Q5JU85 1478 aa16.07■□□□□ 0.16
PPFIA2-218ENST00000550018 DNMT1P26358 1616 aaKnown RBP16.06■□□□□ 0.16
PPFIA2-218ENST00000550018 A2MP01023 1474 aa16.06■□□□□ 0.16
PPFIA2-218ENST00000550018 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
PPFIA2-218ENST00000550018 ALKQ9UM73 1620 aa16.05■□□□□ 0.16
PPFIA2-218ENST00000550018 ZNF644Q9H582 1327 aaPredicted RBP16.03■□□□□ 0.16
PPFIA2-218ENST00000550018 PLA2R1Q13018 1463 aa16.03■□□□□ 0.16
PPFIA2-218ENST00000550018 SPAG9O60271 1321 aaKnown RBP16.02■□□□□ 0.16
PPFIA2-218ENST00000550018 STRCP1A6NGW2 1772 aa16.01■□□□□ 0.15
PPFIA2-218ENST00000550018 MBD5Q9P267 1494 aa16.01■□□□□ 0.15
PPFIA2-218ENST00000550018 MED1Q15648 1581 aaPredicted RBP16■□□□□ 0.15
PPFIA2-218ENST00000550018 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
PPFIA2-218ENST00000550018 KIAA1107Q9UPP5 1409 aa15.98■□□□□ 0.15
PPFIA2-218ENST00000550018 A2ML1A8K2U0 1454 aa15.97■□□□□ 0.15
PPFIA2-218ENST00000550018 VWDEQ8N2E2 1590 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms