RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 ARAP3Q8WWN8 1544 aa18.65■□□□□ 0.58
CACNB3-212ENST00000549971 DAPK1P53355 1430 aa18.65■□□□□ 0.58
CACNB3-212ENST00000549971 PLEKHH2Q8IVE3 1493 aa18.65■□□□□ 0.58
CACNB3-212ENST00000549971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.64■□□□□ 0.58
CACNB3-212ENST00000549971 RSPH4AQ5TD94 716 aa18.64■□□□□ 0.57
CACNB3-212ENST00000549971 RAB3GAP2Q9H2M9 1393 aa18.64■□□□□ 0.57
CACNB3-212ENST00000549971 SHANK2Q9UPX8 1470 aa18.62■□□□□ 0.57
CACNB3-212ENST00000549971 MYO5CQ9NQX4 1742 aa18.6■□□□□ 0.57
CACNB3-212ENST00000549971 ARHGEF5Q12774 1597 aa18.6■□□□□ 0.57
CACNB3-212ENST00000549971 ABCC5O15440 1437 aa18.6■□□□□ 0.57
CACNB3-212ENST00000549971 PTPRKQ15262 1439 aa18.6■□□□□ 0.57
CACNB3-212ENST00000549971 GCC2Q8IWJ2 1684 aa18.6■□□□□ 0.57
CACNB3-212ENST00000549971 TTC37Q6PGP7 1564 aa18.59■□□□□ 0.57
CACNB3-212ENST00000549971 PLCH2O75038 1416 aa18.58■□□□□ 0.57
CACNB3-212ENST00000549971 NAIPQ13075 1403 aa18.58■□□□□ 0.57
CACNB3-212ENST00000549971 DHX57Q6P158 1386 aaKnown RBP18.58■□□□□ 0.57
CACNB3-212ENST00000549971 KIAA1107Q9UPP5 1409 aa18.57■□□□□ 0.56
CACNB3-212ENST00000549971 ARHGAP5Q13017 1502 aa18.57■□□□□ 0.56
CACNB3-212ENST00000549971 ADGRL2O95490 1459 aa18.57■□□□□ 0.56
CACNB3-212ENST00000549971 ASXL2Q76L83 1435 aa18.57■□□□□ 0.56
CACNB3-212ENST00000549971 CROCC2H7BZ55 1655 aa18.56■□□□□ 0.56
CACNB3-212ENST00000549971 ABCA9Q8IUA7 1624 aa18.55■□□□□ 0.56
CACNB3-212ENST00000549971 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
CACNB3-212ENST00000549971 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
CACNB3-212ENST00000549971 RIMBP3CA6NJZ7 1639 aa18.54■□□□□ 0.56
CACNB3-212ENST00000549971 RIMBP3BA6NNM3 1639 aa18.54■□□□□ 0.56
CACNB3-212ENST00000549971 RIMBP3Q9UFD9 1639 aa18.54■□□□□ 0.56
CACNB3-212ENST00000549971 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
CACNB3-212ENST00000549971 ZNF777Q9ULD5 760 aaPredicted RBP18.53■□□□□ 0.56
CACNB3-212ENST00000549971 ANKRD30AQ9BXX3 1397 aa18.53■□□□□ 0.56
CACNB3-212ENST00000549971 CCDC141Q6ZP82 1450 aa18.52■□□□□ 0.56
CACNB3-212ENST00000549971 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.56
CACNB3-212ENST00000549971 SAMD9LQ8IVG5 1584 aa18.52■□□□□ 0.56
CACNB3-212ENST00000549971 MAPKBP1O60336 1514 aa18.52■□□□□ 0.56
CACNB3-212ENST00000549971 KCNH8Q96L42 1107 aa18.51■□□□□ 0.55
CACNB3-212ENST00000549971 MBD5Q9P267 1494 aa18.51■□□□□ 0.55
CACNB3-212ENST00000549971 TSPY4P0CV99 314 aa18.5■□□□□ 0.55
CACNB3-212ENST00000549971 TSPY10P0CW01 314 aa18.5■□□□□ 0.55
CACNB3-212ENST00000549971 MAST1Q9Y2H9 1570 aa18.48■□□□□ 0.55
CACNB3-212ENST00000549971 NCOA1Q15788 1441 aa18.48■□□□□ 0.55
CACNB3-212ENST00000549971 C9orf84Q5VXU9 1444 aa18.48■□□□□ 0.55
CACNB3-212ENST00000549971 CFAP74Q9C0B2 1584 aa18.46■□□□□ 0.55
CACNB3-212ENST00000549971 ABCC1P33527 1531 aa18.45■□□□□ 0.54
CACNB3-212ENST00000549971 CHIC2Q9UKJ5 165 aa18.45■□□□□ 0.54
CACNB3-212ENST00000549971 SYCP2Q9BX26 1530 aa18.44■□□□□ 0.54
CACNB3-212ENST00000549971 RRP7BPQ9NSQ0 103 aa18.43■□□□□ 0.54
CACNB3-212ENST00000549971 FANCAO15360 1455 aa18.41■□□□□ 0.54
CACNB3-212ENST00000549971 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
CACNB3-212ENST00000549971 CYB5RLQ6IPT4 315 aa18.4■□□□□ 0.54
CACNB3-212ENST00000549971 GLI2P10070 1586 aa18.39■□□□□ 0.53
CACNB3-212ENST00000549971 HNRNPMP52272 730 aaKnown RBP eCLIP18.39■□□□□ 0.53
CACNB3-212ENST00000549971 RTEL1-TNFRSF6BF6WH68 1400 aa18.39■□□□□ 0.53
CACNB3-212ENST00000549971 TIMELESSQ9UNS1 1208 aa18.38■□□□□ 0.53
CACNB3-212ENST00000549971 ANKRD50Q9ULJ7 1429 aa18.38■□□□□ 0.53
CACNB3-212ENST00000549971 CD109Q6YHK3 1445 aa18.37■□□□□ 0.53
CACNB3-212ENST00000549971 KIF15Q9NS87 1388 aa18.36■□□□□ 0.53
CACNB3-212ENST00000549971 NEO1Q92859 1461 aa18.35■□□□□ 0.53
CACNB3-212ENST00000549971 ADGRL1O94910 1474 aa18.34■□□□□ 0.53
CACNB3-212ENST00000549971 ARHGEF12Q9NZN5 1544 aa18.33■□□□□ 0.53
CACNB3-212ENST00000549971 DUOX2Q9NRD8 1548 aa18.32■□□□□ 0.52
CACNB3-212ENST00000549971 TRIM52Q96A61 297 aa18.31■□□□□ 0.52
CACNB3-212ENST00000549971 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
CACNB3-212ENST00000549971 ERBINQ96RT1 1412 aa18.31■□□□□ 0.52
CACNB3-212ENST00000549971 KDM6BO15054 1643 aa18.31■□□□□ 0.52
CACNB3-212ENST00000549971 ZNF518AQ6AHZ1 1483 aa18.29■□□□□ 0.52
CACNB3-212ENST00000549971 TRHP20396 242 aaPredicted RBP18.29■□□□□ 0.52
CACNB3-212ENST00000549971 MAP3K4Q9Y6R4 1608 aa18.29■□□□□ 0.52
CACNB3-212ENST00000549971 SCAPERQ9BY12 1400 aa18.29■□□□□ 0.52
CACNB3-212ENST00000549971 TRAPPC8Q9Y2L5 1435 aa18.29■□□□□ 0.52
CACNB3-212ENST00000549971 SPAG9O60271 1321 aaKnown RBP18.28■□□□□ 0.52
CACNB3-212ENST00000549971 MPHOSPH9Q99550 1183 aa18.27■□□□□ 0.52
CACNB3-212ENST00000549971 ZFYVE16Q7Z3T8 1539 aa18.27■□□□□ 0.51
CACNB3-212ENST00000549971 DIP2BQ9P265 1576 aa18.25■□□□□ 0.51
CACNB3-212ENST00000549971 INO80Q9ULG1 1556 aaPredicted RBP18.25■□□□□ 0.51
CACNB3-212ENST00000549971 ATP7AQ04656 1500 aa18.24■□□□□ 0.51
CACNB3-212ENST00000549971 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
CACNB3-212ENST00000549971 UNC13BO14795 1591 aa18.23■□□□□ 0.51
CACNB3-212ENST00000549971 TEX14Q8IWB6 1497 aa18.23■□□□□ 0.51
CACNB3-212ENST00000549971 KDM5CP41229 1560 aa18.22■□□□□ 0.51
CACNB3-212ENST00000549971 PZPP20742 1482 aa18.21■□□□□ 0.51
CACNB3-212ENST00000549971 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
CACNB3-212ENST00000549971 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
CACNB3-212ENST00000549971 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
CACNB3-212ENST00000549971 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
CACNB3-212ENST00000549971 NUP155O75694 1391 aa18.19■□□□□ 0.5
CACNB3-212ENST00000549971 EIF2AK4Q9P2K8 1649 aaKnown RBP18.19■□□□□ 0.5
CACNB3-212ENST00000549971 AFAP1Q8N556 730 aa18.18■□□□□ 0.5
CACNB3-212ENST00000549971 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
CACNB3-212ENST00000549971 FAM69CQ0P6D2 419 aa18.16■□□□□ 0.5
CACNB3-212ENST00000549971 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
CACNB3-212ENST00000549971 ANKRD30BQ9BXX2 1392 aa18.16■□□□□ 0.5
CACNB3-212ENST00000549971 DHX29Q7Z478 1369 aaKnown RBP18.15■□□□□ 0.5
CACNB3-212ENST00000549971 FAM135AQ9P2D6 1515 aa18.14■□□□□ 0.49
CACNB3-212ENST00000549971 IQGAP3Q86VI3 1631 aa18.14■□□□□ 0.49
CACNB3-212ENST00000549971 RPRD2Q5VT52 1461 aaKnown RBP18.12■□□□□ 0.49
CACNB3-212ENST00000549971 NEUROD1Q13562 356 aa18.11■□□□□ 0.49
CACNB3-212ENST00000549971 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
CACNB3-212ENST00000549971 DEPDC5O75140 1603 aa18.11■□□□□ 0.49
CACNB3-212ENST00000549971 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
CACNB3-212ENST00000549971 KANK1Q14678 1352 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms