RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 SCAPERQ9BY12 1400 aa22.4■■□□□ 1.18
TROAP-211ENST00000549891 YEATS2Q9ULM3 1422 aa22.4■■□□□ 1.18
TROAP-211ENST00000549891 LMTK3Q96Q04 1460 aa22.39■■□□□ 1.17
TROAP-211ENST00000549891 KIF14Q15058 1648 aa22.39■■□□□ 1.17
TROAP-211ENST00000549891 EFCAB2Q5VUJ9 269 aa22.38■■□□□ 1.17
TROAP-211ENST00000549891 SIGLEC1Q9BZZ2 1709 aa22.37■■□□□ 1.17
TROAP-211ENST00000549891 FER1L4A9Z1Z3 1794 aa22.36■■□□□ 1.17
TROAP-211ENST00000549891 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
TROAP-211ENST00000549891 CLIP1P30622 1438 aa22.35■■□□□ 1.17
TROAP-211ENST00000549891 TROQ12816 1431 aaPredicted RBP22.33■■□□□ 1.17
TROAP-211ENST00000549891 FBXO41Q8TF61 875 aa22.32■■□□□ 1.16
TROAP-211ENST00000549891 ATP10AO60312 1499 aa22.32■■□□□ 1.16
TROAP-211ENST00000549891 LRRIQ1Q96JM4 1722 aa22.31■■□□□ 1.16
TROAP-211ENST00000549891 ZNF518AQ6AHZ1 1483 aa22.31■■□□□ 1.16
TROAP-211ENST00000549891 ARHGAP5Q13017 1502 aa22.31■■□□□ 1.16
TROAP-211ENST00000549891 C9orf84Q5VXU9 1444 aa22.31■■□□□ 1.16
TROAP-211ENST00000549891 MLECQ14165 292 aa22.29■■□□□ 1.16
TROAP-211ENST00000549891 PLPPR3Q6T4P5 718 aa22.28■■□□□ 1.16
TROAP-211ENST00000549891 ARHGEF12Q9NZN5 1544 aa22.26■■□□□ 1.15
TROAP-211ENST00000549891 KDM5CP41229 1560 aa22.25■■□□□ 1.15
TROAP-211ENST00000549891 CCDC18Q5T9S5 1454 aa22.25■■□□□ 1.15
TROAP-211ENST00000549891 CDC42BPBQ9Y5S2 1711 aa22.25■■□□□ 1.15
TROAP-211ENST00000549891 HSPA2P54652 639 aa22.22■■□□□ 1.15
TROAP-211ENST00000549891 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
TROAP-211ENST00000549891 PREX2Q70Z35 1606 aa22.21■■□□□ 1.15
TROAP-211ENST00000549891 MYT1LQ9UL68 1186 aa22.21■■□□□ 1.15
TROAP-211ENST00000549891 PREX1Q8TCU6 1659 aa22.2■■□□□ 1.15
TROAP-211ENST00000549891 AFAP1Q8N556 730 aa22.2■■□□□ 1.14
TROAP-211ENST00000549891 REREQ9P2R6 1566 aa22.18■■□□□ 1.14
TROAP-211ENST00000549891 DIP2CQ9Y2E4 1556 aa22.17■■□□□ 1.14
TROAP-211ENST00000549891 MLH3Q9UHC1 1453 aa22.16■■□□□ 1.14
TROAP-211ENST00000549891 SETD1BQ9UPS6 1966 aaKnown RBP22.16■■□□□ 1.14
TROAP-211ENST00000549891 ABCC1P33527 1531 aa22.16■■□□□ 1.14
TROAP-211ENST00000549891 ITSN2Q9NZM3 1697 aa22.15■■□□□ 1.14
TROAP-211ENST00000549891 FYCO1Q9BQS8 1478 aa22.15■■□□□ 1.14
TROAP-211ENST00000549891 CDC42BPAQ5VT25 1732 aa22.14■■□□□ 1.14
TROAP-211ENST00000549891 ABCA6Q8N139 1617 aa22.13■■□□□ 1.13
TROAP-211ENST00000549891 CEBPAP49715 358 aaPredicted RBP22.1■■□□□ 1.13
TROAP-211ENST00000549891 AGLP35573 1532 aa22.1■■□□□ 1.13
TROAP-211ENST00000549891 TRAPPC8Q9Y2L5 1435 aa22.09■■□□□ 1.13
TROAP-211ENST00000549891 ESF1Q9H501 851 aaKnown RBP22.08■■□□□ 1.13
TROAP-211ENST00000549891 KIDINS220Q9ULH0 1771 aa22.07■■□□□ 1.12
TROAP-211ENST00000549891 UHRF1BP1Q6BDS2 1440 aa22.06■■□□□ 1.12
TROAP-211ENST00000549891 C3P01024 1663 aa22.06■■□□□ 1.12
TROAP-211ENST00000549891 DMRT2Q9Y5R5 561 aa22.05■■□□□ 1.12
TROAP-211ENST00000549891 CERKQ8TCT0 537 aa22.04■■□□□ 1.12
TROAP-211ENST00000549891 STRCQ7RTU9 1775 aa22.02■■□□□ 1.12
TROAP-211ENST00000549891 SAMD9LQ8IVG5 1584 aa22.01■■□□□ 1.11
TROAP-211ENST00000549891 ZNF777Q9ULD5 760 aaPredicted RBP22.01■■□□□ 1.11
TROAP-211ENST00000549891 CNTLNQ9NXG0 1405 aa22■■□□□ 1.11
TROAP-211ENST00000549891 GPATCH8Q9UKJ3 1502 aaKnown RBP22■■□□□ 1.11
TROAP-211ENST00000549891 SYCP2Q9BX26 1530 aa21.99■■□□□ 1.11
TROAP-211ENST00000549891 PLEKHH2Q8IVE3 1493 aa21.97■■□□□ 1.11
TROAP-211ENST00000549891 MROH2AA6NES4 1674 aa21.96■■□□□ 1.11
TROAP-211ENST00000549891 SPAG9O60271 1321 aaKnown RBP21.96■■□□□ 1.11
TROAP-211ENST00000549891 CCNB3Q8WWL7 1395 aa21.95■■□□□ 1.1
TROAP-211ENST00000549891 CFDP1Q9UEE9 299 aaPredicted RBP21.94■■□□□ 1.1
TROAP-211ENST00000549891 KIAA1107Q9UPP5 1409 aa21.94■■□□□ 1.1
TROAP-211ENST00000549891 SUPT6HQ7KZ85 1726 aaKnown RBP21.94■■□□□ 1.1
TROAP-211ENST00000549891 ATP7AQ04656 1500 aa21.93■■□□□ 1.1
TROAP-211ENST00000549891 MTUS2Q5JR59 1369 aa21.93■■□□□ 1.1
TROAP-211ENST00000549891 HNRNPMP52272 730 aaKnown RBP eCLIP21.92■■□□□ 1.1
TROAP-211ENST00000549891 INO80Q9ULG1 1556 aaPredicted RBP21.91■■□□□ 1.1
TROAP-211ENST00000549891 PTPRTO14522 1441 aa21.9■■□□□ 1.1
TROAP-211ENST00000549891 NPATQ14207 1427 aa21.89■■□□□ 1.1
TROAP-211ENST00000549891 PLXNC1O60486 1568 aa21.87■■□□□ 1.09
TROAP-211ENST00000549891 A2MP01023 1474 aa21.87■■□□□ 1.09
TROAP-211ENST00000549891 ADGBQ8N7X0 1667 aa21.86■■□□□ 1.09
TROAP-211ENST00000549891 ZMYM3Q14202 1370 aa21.86■■□□□ 1.09
TROAP-211ENST00000549891 EHBP1L1Q8N3D4 1523 aa21.85■■□□□ 1.09
TROAP-211ENST00000549891 CLTCQ00610 1675 aaKnown RBP21.85■■□□□ 1.09
TROAP-211ENST00000549891 TIAM1Q13009 1591 aa21.83■■□□□ 1.09
TROAP-211ENST00000549891 NCOA1Q15788 1441 aa21.83■■□□□ 1.09
TROAP-211ENST00000549891 CAMSAP1Q5T5Y3 1602 aa21.8■■□□□ 1.08
TROAP-211ENST00000549891 PPP6R1Q9UPN7 881 aa21.8■■□□□ 1.08
TROAP-211ENST00000549891 ZNF142P52746 1687 aaPredicted RBP21.79■■□□□ 1.08
TROAP-211ENST00000549891 CEP162Q5TB80 1403 aa21.79■■□□□ 1.08
TROAP-211ENST00000549891 GGT6Q6P531 493 aa21.78■■□□□ 1.08
TROAP-211ENST00000549891 MYO3AQ8NEV4 1616 aa21.77■■□□□ 1.08
TROAP-211ENST00000549891 RTEL1-TNFRSF6BF6WH68 1400 aa21.77■■□□□ 1.08
TROAP-211ENST00000549891 LTBP4Q8N2S1 1624 aa21.76■■□□□ 1.07
TROAP-211ENST00000549891 IQSEC2Q5JU85 1478 aa21.76■■□□□ 1.07
TROAP-211ENST00000549891 MBD5Q9P267 1494 aa21.76■■□□□ 1.07
TROAP-211ENST00000549891 ZNF644Q9H582 1327 aaPredicted RBP21.76■■□□□ 1.07
TROAP-211ENST00000549891 PTPRKQ15262 1439 aa21.74■■□□□ 1.07
TROAP-211ENST00000549891 CEP170BQ9Y4F5 1589 aaPredicted RBP21.74■■□□□ 1.07
TROAP-211ENST00000549891 PLA2R1Q13018 1463 aa21.72■■□□□ 1.07
TROAP-211ENST00000549891 PKD2Q13563 968 aa21.7■■□□□ 1.06
TROAP-211ENST00000549891 RSPH4AQ5TD94 716 aa21.7■■□□□ 1.06
TROAP-211ENST00000549891 DHX29Q7Z478 1369 aaKnown RBP21.7■■□□□ 1.06
TROAP-211ENST00000549891 CCDC141Q6ZP82 1450 aa21.7■■□□□ 1.06
TROAP-211ENST00000549891 NCOA2Q15596 1464 aa21.69■■□□□ 1.06
TROAP-211ENST00000549891 NCKAP5LQ9HCH0 1330 aa21.68■■□□□ 1.06
TROAP-211ENST00000549891 CAMSAP2Q08AD1 1489 aa21.68■■□□□ 1.06
TROAP-211ENST00000549891 FAM135AQ9P2D6 1515 aa21.67■■□□□ 1.06
TROAP-211ENST00000549891 TCOF1Q13428 1488 aaKnown RBP21.65■■□□□ 1.06
TROAP-211ENST00000549891 A2ML1A8K2U0 1454 aa21.64■■□□□ 1.06
TROAP-211ENST00000549891 KIF3BO15066 747 aa21.63■■□□□ 1.05
TROAP-211ENST00000549891 KDM5DQ9BY66 1539 aa21.63■■□□□ 1.05
TROAP-211ENST00000549891 DNMT1P26358 1616 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms