RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
RAB5B-205ENST00000549034 FANCAO15360 1455 aa14.96□□□□□ -0.01
RAB5B-205ENST00000549034 AKNAQ7Z591 1439 aa14.96□□□□□ -0.01
RAB5B-205ENST00000549034 MYO5CQ9NQX4 1742 aa14.96□□□□□ -0.01
RAB5B-205ENST00000549034 CFDP1Q9UEE9 299 aaPredicted RBP14.96□□□□□ -0.01
RAB5B-205ENST00000549034 LRRC9Q6ZRR7 1453 aa14.95□□□□□ -0.02
RAB5B-205ENST00000549034 COL17A1Q9UMD9 1497 aaPredicted RBP14.95□□□□□ -0.02
RAB5B-205ENST00000549034 RAPGEF3O95398 923 aa14.95□□□□□ -0.02
RAB5B-205ENST00000549034 EHBP1L1Q8N3D4 1523 aa14.95□□□□□ -0.02
RAB5B-205ENST00000549034 NEO1Q92859 1461 aa14.95□□□□□ -0.02
RAB5B-205ENST00000549034 PPARGC1BQ86YN6 1023 aaKnown RBP14.94□□□□□ -0.02
RAB5B-205ENST00000549034 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
RAB5B-205ENST00000549034 GPATCH8Q9UKJ3 1502 aaKnown RBP14.92□□□□□ -0.02
RAB5B-205ENST00000549034 SUPT6HQ7KZ85 1726 aaKnown RBP14.92□□□□□ -0.02
RAB5B-205ENST00000549034 CDC42BPBQ9Y5S2 1711 aa14.92□□□□□ -0.02
RAB5B-205ENST00000549034 ARAP3Q8WWN8 1544 aa14.92□□□□□ -0.02
RAB5B-205ENST00000549034 NCOA2Q15596 1464 aa14.91□□□□□ -0.02
RAB5B-205ENST00000549034 CDC42BPAQ5VT25 1732 aa14.91□□□□□ -0.02
RAB5B-205ENST00000549034 SCAPERQ9BY12 1400 aa14.91□□□□□ -0.02
RAB5B-205ENST00000549034 CFAP74Q9C0B2 1584 aa14.9□□□□□ -0.02
RAB5B-205ENST00000549034 HNRNPMP52272 730 aaKnown RBP eCLIP14.89□□□□□ -0.03
RAB5B-205ENST00000549034 MYT1LQ9UL68 1186 aa14.89□□□□□ -0.03
RAB5B-205ENST00000549034 DENND4BO75064 1496 aaPredicted RBP14.89□□□□□ -0.03
RAB5B-205ENST00000549034 AFAP1Q8N556 730 aa14.88□□□□□ -0.03
RAB5B-205ENST00000549034 ZNF644Q9H582 1327 aaPredicted RBP14.88□□□□□ -0.03
RAB5B-205ENST00000549034 ADGRL1O94910 1474 aa14.88□□□□□ -0.03
RAB5B-205ENST00000549034 PREX2Q70Z35 1606 aa14.88□□□□□ -0.03
RAB5B-205ENST00000549034 ITSN2Q9NZM3 1697 aa14.83□□□□□ -0.04
RAB5B-205ENST00000549034 ARHGEF12Q9NZN5 1544 aa14.81□□□□□ -0.04
RAB5B-205ENST00000549034 SAMD9LQ8IVG5 1584 aa14.81□□□□□ -0.04
RAB5B-205ENST00000549034 TRAPPC8Q9Y2L5 1435 aa14.8□□□□□ -0.04
RAB5B-205ENST00000549034 RICTORQ6R327 1708 aa14.8□□□□□ -0.04
RAB5B-205ENST00000549034 RSPH4AQ5TD94 716 aa14.79□□□□□ -0.04
RAB5B-205ENST00000549034 MYOM3Q5VTT5 1437 aa14.79□□□□□ -0.04
RAB5B-205ENST00000549034 PLEKHH2Q8IVE3 1493 aa14.79□□□□□ -0.04
RAB5B-205ENST00000549034 POGZQ7Z3K3 1410 aa14.78□□□□□ -0.04
RAB5B-205ENST00000549034 KIAA1107Q9UPP5 1409 aa14.78□□□□□ -0.04
RAB5B-205ENST00000549034 FRMPD1Q5SYB0 1578 aa14.77□□□□□ -0.04
RAB5B-205ENST00000549034 ABCC1P33527 1531 aa14.77□□□□□ -0.04
RAB5B-205ENST00000549034 MIA2Q96PC5 1412 aa14.77□□□□□ -0.04
RAB5B-205ENST00000549034 SPAG9O60271 1321 aaKnown RBP14.77□□□□□ -0.04
RAB5B-205ENST00000549034 ZNF518AQ6AHZ1 1483 aa14.76□□□□□ -0.05
RAB5B-205ENST00000549034 ARID4BQ4LE39 1312 aaPredicted RBP14.76□□□□□ -0.05
RAB5B-205ENST00000549034 TSPY4P0CV99 314 aa14.76□□□□□ -0.05
RAB5B-205ENST00000549034 TSPY10P0CW01 314 aa14.76□□□□□ -0.05
RAB5B-205ENST00000549034 FAM50AQ14320 339 aaKnown RBP14.76□□□□□ -0.05
RAB5B-205ENST00000549034 SYCP2Q9BX26 1530 aa14.76□□□□□ -0.05
RAB5B-205ENST00000549034 CAMSAP2Q08AD1 1489 aa14.75□□□□□ -0.05
RAB5B-205ENST00000549034 MAGI2Q86UL8 1455 aa14.74□□□□□ -0.05
RAB5B-205ENST00000549034 YEATS2Q9ULM3 1422 aa14.73□□□□□ -0.05
RAB5B-205ENST00000549034 MBD5Q9P267 1494 aa14.72□□□□□ -0.05
RAB5B-205ENST00000549034 FGD6Q6ZV73 1430 aa14.72□□□□□ -0.05
RAB5B-205ENST00000549034 ZFYVE16Q7Z3T8 1539 aa14.71□□□□□ -0.05
RAB5B-205ENST00000549034 ZMYM4Q5VZL5 1548 aa14.71□□□□□ -0.06
RAB5B-205ENST00000549034 PTPN23Q9H3S7 1636 aa14.7□□□□□ -0.06
RAB5B-205ENST00000549034 ATP10AO60312 1499 aa14.7□□□□□ -0.06
RAB5B-205ENST00000549034 MLH3Q9UHC1 1453 aa14.7□□□□□ -0.06
RAB5B-205ENST00000549034 KDM5CP41229 1560 aa14.7□□□□□ -0.06
RAB5B-205ENST00000549034 MLECQ14165 292 aa14.69□□□□□ -0.06
RAB5B-205ENST00000549034 CCDC141Q6ZP82 1450 aa14.68□□□□□ -0.06
RAB5B-205ENST00000549034 HECW2Q9P2P5 1572 aa14.68□□□□□ -0.06
RAB5B-205ENST00000549034 KDM4FA0A1W2PPD8 638 aa14.67□□□□□ -0.06
RAB5B-205ENST00000549034 ITGAEP38570 1179 aa14.67□□□□□ -0.06
RAB5B-205ENST00000549034 CHIC2Q9UKJ5 165 aa14.67□□□□□ -0.06
RAB5B-205ENST00000549034 KIDINS220Q9ULH0 1771 aa14.67□□□□□ -0.06
RAB5B-205ENST00000549034 TCOF1Q13428 1488 aaKnown RBP14.66□□□□□ -0.06
RAB5B-205ENST00000549034 ARHGEF5Q12774 1597 aa14.65□□□□□ -0.06
RAB5B-205ENST00000549034 RTEL1-TNFRSF6BF6WH68 1400 aa14.65□□□□□ -0.06
RAB5B-205ENST00000549034 C9orf84Q5VXU9 1444 aa14.65□□□□□ -0.06
RAB5B-205ENST00000549034 ATP7AQ04656 1500 aa14.64□□□□□ -0.07
RAB5B-205ENST00000549034 ARHGEF40Q8TER5 1519 aa14.64□□□□□ -0.07
RAB5B-205ENST00000549034 ABCC5O15440 1437 aa14.64□□□□□ -0.07
RAB5B-205ENST00000549034 RRP7BPQ9NSQ0 103 aa14.63□□□□□ -0.07
RAB5B-205ENST00000549034 DAPK1P53355 1430 aa14.62□□□□□ -0.07
RAB5B-205ENST00000549034 DIP2CQ9Y2E4 1556 aa14.62□□□□□ -0.07
RAB5B-205ENST00000549034 ABCA6Q8N139 1617 aa14.62□□□□□ -0.07
RAB5B-205ENST00000549034 GGT6Q6P531 493 aa14.6□□□□□ -0.07
RAB5B-205ENST00000549034 A2MP01023 1474 aa14.6□□□□□ -0.07
RAB5B-205ENST00000549034 INO80Q9ULG1 1556 aaPredicted RBP14.6□□□□□ -0.07
RAB5B-205ENST00000549034 DHX29Q7Z478 1369 aaKnown RBP14.6□□□□□ -0.07
RAB5B-205ENST00000549034 KIF3BO15066 747 aa14.59□□□□□ -0.07
RAB5B-205ENST00000549034 DNMT1P26358 1616 aaKnown RBP14.59□□□□□ -0.07
RAB5B-205ENST00000549034 SIGLEC1Q9BZZ2 1709 aa14.58□□□□□ -0.07
RAB5B-205ENST00000549034 ESF1Q9H501 851 aaKnown RBP14.58□□□□□ -0.08
RAB5B-205ENST00000549034 ADGBQ8N7X0 1667 aa14.58□□□□□ -0.08
RAB5B-205ENST00000549034 ANKRD30AQ9BXX3 1397 aa14.57□□□□□ -0.08
RAB5B-205ENST00000549034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
RAB5B-205ENST00000549034 MAST1Q9Y2H9 1570 aa14.56□□□□□ -0.08
RAB5B-205ENST00000549034 BCORL1Q5H9F3 1711 aa14.56□□□□□ -0.08
RAB5B-205ENST00000549034 RRBP1Q9P2E9 1410 aaKnown RBP14.56□□□□□ -0.08
RAB5B-205ENST00000549034 REREQ9P2R6 1566 aa14.55□□□□□ -0.08
RAB5B-205ENST00000549034 PTPRKQ15262 1439 aa14.54□□□□□ -0.08
RAB5B-205ENST00000549034 AGLP35573 1532 aa14.54□□□□□ -0.08
RAB5B-205ENST00000549034 CROCC2H7BZ55 1655 aa14.54□□□□□ -0.08
RAB5B-205ENST00000549034 SHANK2Q9UPX8 1470 aa14.53□□□□□ -0.08
RAB5B-205ENST00000549034 KIF15Q9NS87 1388 aa14.53□□□□□ -0.08
RAB5B-205ENST00000549034 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
RAB5B-205ENST00000549034 ADAMTSL3P82987 1691 aa14.52□□□□□ -0.08
RAB5B-205ENST00000549034 NCOA1Q15788 1441 aa14.52□□□□□ -0.08
RAB5B-205ENST00000549034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms